Sequence details NCBI ID: XM_004858929.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Psenen
Gene Name presenilin enhancer 2 homolog (C. elegans), transcript variant X2
Entrez Gene ID 101700116

Database interlinks

Part of NW_004624794.1 (Scaffold)

For more information consult the page for NW_004624794.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ENSCPOG00000003729 (Guinea pig)

Gene Details

Uncharacterized protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003368, Guinea pig)

Protein Percentage 99.01%
CDS Percentage 95.71%
Ka/Ks Ratio 0.02163 (Ka = 0.0044, Ks = 0.2036)

Psenen ENSMUSG00000036835 (Mouse)

Gene Details

presenilin enhancer 2 homolog (C. elegans)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000044682, Mouse)

Protein Percentage 96.04%
CDS Percentage 91.75%
Ka/Ks Ratio 0.03794 (Ka = 0.0176, Ks = 0.4651)

Psenen ENSRNOG00000020941 (Rat)

Gene Details

presenilin enhancer 2 homolog (C. elegans) (Psenen), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000028438, Rat)

Protein Percentage 96.04%
CDS Percentage 92.41%
Ka/Ks Ratio 0.04813 (Ka = 0.0179, Ks = 0.3722)

Genome Location

Sequence Coding sequence

Length: 306 bp    Location: 10053112..10054411   Strand: +
Raw sequence   
>XM_004858929.1
ATGAACTTGGAGCGGGTCTCCAATGAGGAGAAGTTGAACCTGTGCCGGAAGTACTATCTGGGTGGGTTTGCATTCCTGCCTTTTCTGTGGTTGGTCAACATCTTCTGGTTCTTCCGAGAGGCCTTCCTTGTCCCAGCCTACACAGAGCAGAGCCAAATCAAAGGCTATGTCTGGCGCTCAGCTGTGGGCTTCCTCTTCTGGGTAATTGTGCTCACCACCTGGATCACCGTCTTCCAGATCTACCGGCCCCGCTGGGGTGCCCTTGGGGACTACCTCTCCTTTACCATACCCTTGGGAACCCCCTGA

Related Sequences

XP_004858986.1 Protein

Psenen PREDICTED: gamma-secretase subunit PEN-2 isoform X2 [Heterocephalus glaber]

Length: 101 aa      
>XP_004858986.1
MNLERVSNEEKLNLCRKYYLGGFAFLPFLWLVNIFWFFREAFLVPAYTEQSQIKGYVWRSAVGFLFWVIVLTTWITVFQIYRPRWGALGDYLSFTIPLGTP