Sequence details NCBI ID: XM_004858918.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Lrp3
Gene Name low density lipoprotein receptor-related protein 3, transcript variant X2
Entrez Gene ID 101696559

Database interlinks

Part of NW_004624794.1 (Scaffold)

For more information consult the page for NW_004624794.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LRP3 ENSCPOG00000013712 (Guinea pig)

Gene Details

low density lipoprotein receptor-related protein 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012349, Guinea pig)

Protein Percentage 95.32%
CDS Percentage 92.28%
Ka/Ks Ratio 0.07798 (Ka = 0.0228, Ks = 0.2925)

LRP3 ENSG00000130881 (Human)

Gene Details

low density lipoprotein receptor-related protein 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000253193, Human)

Protein Percentage 93.24%
CDS Percentage 87.08%
Ka/Ks Ratio 0.03929 (Ka = 0.0329, Ks = 0.8361)

Lrp3 ENSMUSG00000001802 (Mouse)

Gene Details

low density lipoprotein receptor-related protein 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000114026, Mouse)

Protein Percentage 93.49%
CDS Percentage 86.68%
Ka/Ks Ratio 0.05463 (Ka = 0.036, Ks = 0.6583)

Lrp3 ENSRNOG00000011451 (Rat)

Gene Details

low density lipoprotein receptor-related protein 3 (Lrp3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000015384, Rat)

Protein Percentage 93.37%
CDS Percentage 86.65%
Ka/Ks Ratio 0.05603 (Ka = 0.0361, Ks = 0.6444)

Genome Location

Sequence Coding sequence

Length: 2310 bp    Location: 9904291..9892300   Strand: -
Raw sequence   
>XM_004858918.1
ATGGAAAAACGGGCGGCCTCCGGGCCGGAAGGGGCTCCGGGCGCCCGAGCGCAGCTCGCCGTAGTCTGTCTGGTGAACCTCTTTCTCACTGGCAGGCTCAGCAGTGCAGTCCCCGCCTTCGCTGCCTGCAGTGGGAAGCTGGAGCAGCACACAGAACGGCGTGGTGTTATCTATAGCCCAGCCTGGCCCCTCAACTACCCACCAGGCACCAACTGCAGCTGGTACATCCAGGGGGACCGTGGGGACATGATCACCATCAGTTTCCGCAACTTTGATGTGGAGGAGTCCCACCAGTGCTCCCTGGACTGGCTCCTGCTGGGCCCTGCAGCCCCACCTCGCCAGGAGGCCTTCCGCCTCTGTGGCTCTGCCATCCCTCCTGCCTTCATTTCTGCCCGTGACCACGTCTGGATCTTCTTCCACTCAGATGCCTCCAGCTCTGGCCAGGCCCAGGGCTTCCGCCTCTCCTACATCCGAGGGAAGCTGGGCCAAGTGTCCTGCCAGGCAGACGAGTTCCGGTGTGACAACGGCAAGTGCCTGCCGGGCCCATGGCAGTGTAACACTGTGGATGAGTGTGGCGATGGCTCTGATGAAGGCAACTGCTCAGCACCTGCCTCTGAACCTCCTGGCAGCCTGTGCCCAGGGGGCACCTTCCCCTGCAGTGGGGCACGCTCCACGCGCTGTCTGCCAGTGGAGCGGCGTTGTGATGGCACCCAGGACTGTGGTGATGGCTCTGATGAGGCTGGCTGTCCTGACCTGGCATGTGGCCGGCGGCTGGGCAGCTTCTATGGCTCTTTCGCTTCTCCAGACCTGTTTGGCGCAGCCCGTGGGCCCTCGGACCTTCACTGCACATGGCTGGTGGACACGCAGGACCCTCGGCGCGTGCTGCTGCAGCTGGAGCTACGGCTGGGTTACGATGACTATGTTCAGGTGTATGAGGGCCTGGGCGAGCGTGGGGACCGCCTGCTGCAGACTCTGTCCTACCACAGCAACCACCGGCCAGTGAGCCTCGAGGCTGCACAGGGCCGCCTCACTGTGGCCTACCATGCCCGTGCCCGCAGCGCTGGCCATGGCTTCAACGCCACCTACCAGGTGAAGGGCTACTGCCTCCCATGGGAGCAGCCATGCGGGAGCAGCAGTGAAGGGGACAGTGGCAGCTCAGGGGACCAAGGCTGCTTCTCAGAGCCACAGCGTTGCGATGGTTGGTGGCACTGTGCCAGTGGCCGGGATGAGCAGGGCTGCCCTGCCTGTCCACCTGACCAGTACCCCTGTGAGGGAGGCAGTGGCCTGTGCTATGCACCTGCCGACCGCTGCAACAACCAGAAAAGCTGCCCAGATGGCGCTGATGAGAAGAACTGCTTCTCCTGCCAGCCTGGAACCTTCCACTGTGGCACCAACCTGTGCATCTTTGAGACGTGGCGCTGTGACGGCCAGGAGGACTGCCAGGATGGCAGCGATGAGCACGGCTGCCTGGCTGCTGTGCCGCGCAAGGTCATCACTGCTGCACTCATTGGCAGCCTGGTGTGTGGCCTGCTGCTGGTCATCGCGCTGGGCTGTGCCTTCAAGCTCTACTCCCTGCGCACGCAGGAGTACAGGGCCTTTGAGACCCAGATGACACGCCTGGAGGCCGAGTTTGTGCGGCGGGAGGCGCCCCCGTCCTACGGCCAGCTCATCGCACAGGGCCTCATCCCACCTGTGGAGGACTTCCCTGTGTACAGCGCATCCCAGGTGTCTGTGCTACAGAACCTTCGCACAGCCATGCGAAGGCAGATGAGGCGACATGCCTCCCGCCGGGGCCCCTCCCGTCGAAGGCTCGGCCGTCTCTGGAACCGGCTATTTCACCGGCCACGGGCACCTCGAGGCCAGATCCCGCTTCTGACTGCTGCTCGAACCTCACAGACAGTGCTGGGCGATGGGCTCCTCCAGCCTGGACCAGGGGCCACCCCAGGCCCCTCAGCCCCCCCCACGGACGCAGGCAGCCCCAGAGCACCTGGGGATGGGCCTCCCAGTGCCCCTGGCCATACACTAGAGTTGGGACCTTCAGTGCCCTTGCCCTCAGGCCTCCAAGACCCAGAATACAGGCCCATGGACAGGGACAGAAAAGCCTGCAGGGACCCTCTGGTGGACAACTTGGCCACTGTGGACACAGCTCCTGAGCCTCGCTCAGCCCAGGATCCTCAGCCCCAGGTTCCCACTGCCAGCAGCACCCAAGGCCCCCACTCAGCAGAGCCACTGGGGGGCTGCCGGAGCCCCCTGCCACCCTGCTCCCCAATGTTGGAAGCCAGCGACGATGAGGCCCTGCTGGTCTGCTGA

Related Sequences

XP_004858975.1 Protein

Lrp3 PREDICTED: low-density lipoprotein receptor-related protein 3 isoform X2 [Heterocephalus glaber]

Length: 769 aa      View alignments
>XP_004858975.1
MEKRAASGPEGAPGARAQLAVVCLVNLFLTGRLSSAVPAFAACSGKLEQHTERRGVIYSPAWPLNYPPGTNCSWYIQGDRGDMITISFRNFDVEESHQCSLDWLLLGPAAPPRQEAFRLCGSAIPPAFISARDHVWIFFHSDASSSGQAQGFRLSYIRGKLGQVSCQADEFRCDNGKCLPGPWQCNTVDECGDGSDEGNCSAPASEPPGSLCPGGTFPCSGARSTRCLPVERRCDGTQDCGDGSDEAGCPDLACGRRLGSFYGSFASPDLFGAARGPSDLHCTWLVDTQDPRRVLLQLELRLGYDDYVQVYEGLGERGDRLLQTLSYHSNHRPVSLEAAQGRLTVAYHARARSAGHGFNATYQVKGYCLPWEQPCGSSSEGDSGSSGDQGCFSEPQRCDGWWHCASGRDEQGCPACPPDQYPCEGGSGLCYAPADRCNNQKSCPDGADEKNCFSCQPGTFHCGTNLCIFETWRCDGQEDCQDGSDEHGCLAAVPRKVITAALIGSLVCGLLLVIALGCAFKLYSLRTQEYRAFETQMTRLEAEFVRREAPPSYGQLIAQGLIPPVEDFPVYSASQVSVLQNLRTAMRRQMRRHASRRGPSRRRLGRLWNRLFHRPRAPRGQIPLLTAARTSQTVLGDGLLQPGPGATPGPSAPPTDAGSPRAPGDGPPSAPGHTLELGPSVPLPSGLQDPEYRPMDRDRKACRDPLVDNLATVDTAPEPRSAQDPQPQVPTASSTQGPHSAEPLGGCRSPLPPCSPMLEASDDEALLVC