Details from NCBI annotation

Gene Symbol Lsm14a
Gene Name LSM14A, SCD6 homolog A (S. cerevisiae), transcript variant X1
Entrez Gene ID 101723527

Database interlinks

Part of NW_004624794.1 (Scaffold)

For more information consult the page for NW_004624794.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LSM14A ENSCPOG00000025803 (Guinea pig)

Gene Details

LSM14A, SCD6 homolog A (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000020325, Guinea pig)

Protein Percentage 95.91%
CDS Percentage 94.76%
Ka/Ks Ratio 0.10777 (Ka = 0.0188, Ks = 0.1746)

LSM14A ENSG00000257103 (Human)

Gene Details

LSM14A, SCD6 homolog A (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSP00000446271, Human)

Protein Percentage 94.17%
CDS Percentage 91.79%
Ka/Ks Ratio 0.10909 (Ka = 0.0307, Ks = 0.2815)

Lsm14a ENSMUSG00000066568 (Mouse)

Gene Details

LSM14 homolog A (SCD6, S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000082723, Mouse)

Protein Percentage 93.51%
CDS Percentage 89.68%
Ka/Ks Ratio 0.08422 (Ka = 0.0331, Ks = 0.3928)

Lsm14a ENSRNOG00000021133 (Rat)

Gene Details

LSM14A, SCD6 homolog A (S. cerevisiae) (Lsm14a), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000030800, Rat)

Protein Percentage 92.44%
CDS Percentage 88.77%
Ka/Ks Ratio 0.10028 (Ka = 0.0416, Ks = 0.4144)

Genome Location

Sequence Coding sequence

Length: 1401 bp    Location: 9035700..8977046   Strand: -
>XM_004858907.1
ATGAGCGGGGGCACTCCTTACATCGGCAGCAAGATCAGTCTCATTTCTAAGGCGGAGATCCGCTACGAGGGCATCCTCTACACCATCGACACCGAGAACTCCACCGTAGCCCTCGCCAAAGTTCGATCCTTTGGTACAGAAGACAGACCAACAGATCGTCCAATACCACCTCGAGATGAAGTCTTTGAATACATTATATTCCGCGGGAGTGATATCAAAGACCTCACTGTTTGTGAGCCACCAAAACCACAATGTTCTTTGCCTCAGGACCCAGCTATTGTTCAGTCTTCATTAGGTTCATCTACTTCTTCATTCCAGTCAGTGGGAGTGGGTTCCTATGGACCTTTTGGCAGGATGCCGACATACAGCCAGTTCAGTCCAAGTTCATTGGTTGGGCAACAGTTTAGTGCTGTTGGTGTTGCTGGAAGCTCTTTGACATCCTTTGGAGCAGAAACGTCGAACAGCAGTAACTTACCCCAAAGTGGTGCAATTGGATCTGCCTTTACACAGGATACGAGATCTATAAAAACACAGTTATCTCAAGGTCGTTCAAGCCCTCAGTTAGACCCTTTGAGAAAAAGTCCAACCATGGAGCAAGCAGTACAGACCGCCTCGGCCCACTTACCTGCTCCAGCACCTGTTGGGAGAAGGAGCCCTATATCAAGCAGGCCTTTGCCATCCACCAGCCAAAAAGCATTAGAGAATCAAGAGCACAGGCGAGCTGAAGTCCACAAAGTTCCAAGGCCAGAAAATGAGCAACTCAGAAATGATAGCAAGAGACAAATAGTTCCAGGCGCTCCTTCCACTCCAAGGAGAGGGCGTGGAGGTCATCGAGGTGGCCGGGGAAGGTTTGGTATTCGGCGAGATGGTCCAATGAAATTTGAGAAAGACTTTGACTTCGAAAGTGCAAATGCACAATTTAACAAAGAGGAGATTGACAGAGAATTTCATAATAAGCTTAAATTAAAAGAAGATAAACTTGAGAAACAAGAGAAACCTGTAAATGGTGAAGATAAGGGAGACTCGGGAGTTGATACCCAAAACAGTGAAGGAAATGCTGATGAAGAAGACCCACTTGGACCTAATTGCTATTATGACAAAACTAAATCCTTCTTTGATAATATTTCTTGTGATGATAACAGAGAACGGAGACCAACCTGGGCTGAAGAAAGGAGATTAAATGCTGAAACTTTTGGAATTCCACTTCGTCCAAACCGTGGCCGTGGTGGGTACAGAGGAGGGAGAGGAGGTCTTGGTTTTCGTGGTGGCAGAGGACGTGGTGGTAGCAGAGGTGGTGCCTTCACTACTCCTCGGGGATTTCGTGGTGGATTCAGAGGAGGTCGTGGAGGAAGAGAGTTTGCAGATTTTGAATATAGGAAAACCACAGCTTTTGGACCCTAA

Related Sequences

XP_004858964.1 Protein

Lsm14a PREDICTED: protein LSM14 homolog A isoform X1 [Heterocephalus glaber]

Length: 466 aa      View alignments
>XP_004858964.1
MSGGTPYIGSKISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRPIPPRDEVFEYIIFRGSDIKDLTVCEPPKPQCSLPQDPAIVQSSLGSSTSSFQSVGVGSYGPFGRMPTYSQFSPSSLVGQQFSAVGVAGSSLTSFGAETSNSSNLPQSGAIGSAFTQDTRSIKTQLSQGRSSPQLDPLRKSPTMEQAVQTASAHLPAPAPVGRRSPISSRPLPSTSQKALENQEHRRAEVHKVPRPENEQLRNDSKRQIVPGAPSTPRRGRGGHRGGRGRFGIRRDGPMKFEKDFDFESANAQFNKEEIDREFHNKLKLKEDKLEKQEKPVNGEDKGDSGVDTQNSEGNADEEDPLGPNCYYDKTKSFFDNISCDDNRERRPTWAEERRLNAETFGIPLRPNRGRGGYRGGRGGLGFRGGRGRGGSRGGAFTTPRGFRGGFRGGRGGREFADFEYRKTTAFGP