Details from NCBI annotation

Gene Symbol Lgi4
Gene Name leucine-rich repeat LGI family, member 4, transcript variant X2
Entrez Gene ID 101704150

Database interlinks

Part of NW_004624794.1 (Scaffold)

For more information consult the page for NW_004624794.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LGI4 ENSCPOG00000002945 (Guinea pig)

Gene Details

leucine-rich repeat LGI family, member 4

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002675, Guinea pig)

Protein Percentage 94.07%
CDS Percentage 92.59%
Ka/Ks Ratio 0.10093 (Ka = 0.029, Ks = 0.2869)

LGI4 ENSG00000153902 (Human)

Gene Details

leucine-rich repeat LGI family, member 4

External Links

Gene Match (Ensembl Protein ID: ENSP00000312273, Human)

Protein Percentage 90.5%
CDS Percentage 88.39%
Ka/Ks Ratio 0.08017 (Ka = 0.0476, Ks = 0.5943)

Lgi4 ENSMUSG00000036560 (Mouse)

Gene Details

leucine-rich repeat LGI family, member 4

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000041579, Mouse)

Protein Percentage 86.59%
CDS Percentage 83.12%
Ka/Ks Ratio 0.0683 (Ka = 0.0681, Ks = 0.9965)

Lgi4 ENSRNOG00000021087 (Rat)

Gene Details

leucine-rich repeat LGI family, member 4 (Lgi4), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000028632, Rat)

Protein Percentage 85.29%
CDS Percentage 83.05%
Ka/Ks Ratio 0.08024 (Ka = 0.0748, Ks = 0.9322)

Genome Location

Sequence Coding sequence

Length: 1623 bp    Location: 8358700..8384763   Strand: +
>XM_004858847.1
ATGGCAGGGACAGGGCCTCTGCTGCTGCAGCTGCTGCTCCTGGCTGGGGCTGGGGTGGGGGTGGCCTGGAGACCCCCAAAGGGAAAATGTCCTCTACGCTGCTCCTGCTCCAAGGACAGCGCCCTGTGTGAGGGCTCCCTGGACCTGCCTGAGAGCTTCTCCCCGACGCTGCTGTCACTCTCACTTGTCAGGACTGGAGTTACCCAGCTGAAGGCCAGCAGCTTTTTGAGAATGCCATCCCTGCACCTTCTTCTCTTCACGTCCAACTCCTTCTCCGTGATCGAGGATGATGCGTTTGCCGGCCTGTCCCACCTGCAGTACCTCTTCATTGAGGACAACAAGATTGGCTCCATCTCTAAGAACGCTCTCAGAGGACTTCGCTCGCTCACACACCTAAGCCTGGCCAATAACCACCTGGAGGTCCTCCCCAGGTTCCTGTTCCGAGGCCTGGAGACCCTGACTCACGTGGACCTCCGTGGGAACCCGTTCCAGTGTGACTGCCGTGTCCTCTGGCTGCTGCAGTGGATGGCCACCGTGAATGCCAGCGTGGGGACCGGGGACTGCGCGGGCCCCACCGCCCTGACCCACATGCAGCTCCGACACCTGGACGCCAAGACATTCAAGTGCAGAGGAATAGAGCTGACCTGGTTCCAGACAGTCCAGGAGTCAGCGCTGGGTGTGGAGCCCTTCTCCTACCAGGGGGAGCCCTACATCATCCTGGCACAGCCCTTTGCAGGACAATGCCTGATCCTTGCCTGGGACTACAGCCTGCAGCGCTTCCGGCCCGAGGAGGAGCTGTCAGCGCCCTCGGTGGTGTCCTGCAAGCCGCTGGTGCTGGGCCTGCGTCTCTTCGTGCTGGCCGCCCGCCTGTGGGGAGGTTCACAGCTGTGGGCAAGGCCCAGCCCCGACCTGCGCCTGGCCCCGCTACAGGCCCTGGCCCCACGGCGGCTGCTGAGGCCCAATGACGCCGAGATCCTGTGGCTGGACGAGCAGCCGTGCTTCGTGGTGGCCGATGCCTCCAAGGCAGGCAGCACCACACTGCTCTGTCGAGATGGGCCTGGCTTCTACCCCCGCCAGAGCCTGCATGCCTGGCACCGGGACACGGATGCCGAGGTCCTGGAGCTGGACGGCCACCCCCACCTGCTGCTGGCCTCTGCCTCCCAGCGCCCAGTTCTCTTTCACTGGGTTGGTGGCCGCTTTGAGAGGCGTACAGACATCCCTGAGGCTGAGGACGTCTATGCCACACACCACTTCCAGGCTGGTGGGGATGTGTTCCTGTGCCTGACACGCTACATCGGGGACTCCATGGTCATGCGCTGGGAGGGGTCCATGTTCCGCCTGCTGCAGAAACTTCCCTCACGCGGCGCCCACGTATTCCAGCCGCTGCTCATCGCCAGGGACCAGCTGGCCGTCCTGGGGAGCGACTTTGCCTTCAGCCAGGTCTTTCGCCTTGAGTCAGACAAGGAGCTCCTGGAGCCGCTGCAGGAGCTGGGGCCCCCGACCTTGGTGGCCCCCCGCGCCTTTGCCCACATCACCTTGGCTGGTAGACGCTTTCTGTTTGCAGCTTGCTTCAAGGGTCCCACACAGATCTACCAGCATCACGAGTTGGACCTCAGTGCCTGA

Related Sequences

XP_004858904.1 Protein

Lgi4 PREDICTED: leucine-rich repeat LGI family member 4 isoform X2 [Heterocephalus glaber]

Length: 540 aa      View alignments
>XP_004858904.1
MAGTGPLLLQLLLLAGAGVGVAWRPPKGKCPLRCSCSKDSALCEGSLDLPESFSPTLLSLSLVRTGVTQLKASSFLRMPSLHLLLFTSNSFSVIEDDAFAGLSHLQYLFIEDNKIGSISKNALRGLRSLTHLSLANNHLEVLPRFLFRGLETLTHVDLRGNPFQCDCRVLWLLQWMATVNASVGTGDCAGPTALTHMQLRHLDAKTFKCRGIELTWFQTVQESALGVEPFSYQGEPYIILAQPFAGQCLILAWDYSLQRFRPEEELSAPSVVSCKPLVLGLRLFVLAARLWGGSQLWARPSPDLRLAPLQALAPRRLLRPNDAEILWLDEQPCFVVADASKAGSTTLLCRDGPGFYPRQSLHAWHRDTDAEVLELDGHPHLLLASASQRPVLFHWVGGRFERRTDIPEAEDVYATHHFQAGGDVFLCLTRYIGDSMVMRWEGSMFRLLQKLPSRGAHVFQPLLIARDQLAVLGSDFAFSQVFRLESDKELLEPLQELGPPTLVAPRAFAHITLAGRRFLFAACFKGPTQIYQHHELDLSA