Details from NCBI annotation

Gene Symbol Rbm42
Gene Name RNA binding motif protein 42
Entrez Gene ID 101723525

Database interlinks

Part of NW_004624794.1 (Scaffold)

For more information consult the page for NW_004624794.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RBM42 ENSCPOG00000012365 (Guinea pig)

Gene Details

RNA binding motif protein 42

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011127, Guinea pig)

Protein Percentage 97.67%
CDS Percentage 93.52%
Ka/Ks Ratio 0.06705 (Ka = 0.0131, Ks = 0.1959)

RBM42 ENSG00000126254 (Human)

Gene Details

RNA binding motif protein 42

External Links

Gene Match (Ensembl Protein ID: ENSP00000262633, Human)

Protein Percentage 96.41%
CDS Percentage 90.77%
Ka/Ks Ratio 0.06579 (Ka = 0.0206, Ks = 0.3134)

Rbm42 ENSMUSG00000036733 (Mouse)

Gene Details

RNA binding motif protein 42

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000040005, Mouse)

Protein Percentage 95.56%
CDS Percentage 88.72%
Ka/Ks Ratio 0.06141 (Ka = 0.025, Ks = 0.4064)

Rbm42 ENSRNOG00000024278 (Rat)

Gene Details

RNA binding motif protein 42 (Rbm42), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000029729, Rat)

Protein Percentage 95.77%
CDS Percentage 88.79%
Ka/Ks Ratio 0.05959 (Ka = 0.024, Ks = 0.4031)

Genome Location

Sequence Coding sequence

Length: 1422 bp    Location: 8000291..7991685   Strand: -
>XM_004858813.1
ATGGCCGGGGCAGGGCCAGCCCCGGGACTCCCGGGTGCAGGAGTACCCGTGATCCCAGGCCCTGGTGCCGGCATCCCGGGCAAGAGCGGCGAGGAACGCTTGAAGGAAATGGAGGCGGAGATGGCCCTGTTTGAGCAGGAAGTTCTGGGGGCTCCAGTAACCGGAATCCCCACTGCTATGCCCGCGGTCCCCACAGTGGATACGATGCAGGTCCCAGCAGCTCCTGTGATCCGCCCAATTATTGCGACCAACACATACCAACAGGTCCAACAGACTCTGGAGGCCCGGGCAGCCGCTGCAGCCACAGTAGTTCCTCCCATGGTGGGTCCTCCTTTTGTGGGCCCAGTTGGCTTTGCCCCTGGTGATCGAAGTCACCTGGACAGTCCAGAGGCTCGAGAAGCCTTGTTCCTGCGCCGAGCAGCTGTGGCCCCTCAGAGGGCCGCTGTCCTGCGTCCAGCCTTCGTCCCTCACGTGCTACAGAGAGCAGATTCTCTTCTCTCATCTGCAGCAGGCACTCCCCGCCCGATGGCCCTGCGCCCCCCGCACCAGGCTCTTGTGGGACCCCCGCTTCCTGGGCCCCCTGGACCACCCATGATGCTGCCACCAATGGCTCGGGCCCCGGGTCCCCCCCTGAGCTCCATGGCTGCTCTGAGGCCTGCCCTGGAAGAACCAGCAGCACCCCGAGAGCTGGGCCTAGGCCTGGGGTTGGGCCTGAAAGAGAAGGAAGAGGCAGTGGTGGCAGCGGCAGCTGGGCTGGAGGAAGCTAGTGCTGCAGTGGCTGTGGGAGCAGGAGGTGCTCCCACGGGCCCTGCAGTCATTGGGCCCAGCCTGCCACTGGCCCTGGCCATGCCATTACCTGAGCCCGAGCCCCTGCCCCTACCACTGGAGGTAGTACGTGGCCTGCTGCCCCCACTGCGCATTCCTGAGCTCCTATCCCTTCGTCCACGACCCCGGCCCCCTCGGCCTGAGCCCCCCCCCGGCCTCATGGCTCTCGAGGTGCCAGAGCCCATGGGTGAAGACAAGAAGAAAGGGAAGCCGGAAAAATTGAAACGCTGCATTCGCACAGCAGCCGGAAGCAGCTGGGAGGATCCTAGCCTGTTGGAGTGGGATGCCGATGACTTCCGCATCTTCTGTGGAGATCTGGGCAATGAGGTGAATGACGACATCTTGGCACGTGCCTTCAGCCGCTTCCCATCCTTCCTTAAGGCTAAGGTGATCCGAGACAAACGCACAGGCAAGACCAAGGGCTATGGCTTTGTCAGTTTCAAGGACCCCAGTGACTATGTGCGTGCCATGCGTGAGATGAATGGGAAATATGTGGGCTCACGCCCCATCAAGCTCCGTAAGAGCATGTGGAAGGACCGGAACCTGGACGTGGTTCGAAAGAAGCAGAAGGAAAAGAAGAAGTTGGGCCTGAGATAG

Related Sequences

XP_004858870.1 Protein

Rbm42 PREDICTED: RNA-binding protein 42 [Heterocephalus glaber]

Length: 473 aa      View alignments
>XP_004858870.1
MAGAGPAPGLPGAGVPVIPGPGAGIPGKSGEERLKEMEAEMALFEQEVLGAPVTGIPTAMPAVPTVDTMQVPAAPVIRPIIATNTYQQVQQTLEARAAAAATVVPPMVGPPFVGPVGFAPGDRSHLDSPEAREALFLRRAAVAPQRAAVLRPAFVPHVLQRADSLLSSAAGTPRPMALRPPHQALVGPPLPGPPGPPMMLPPMARAPGPPLSSMAALRPALEEPAAPRELGLGLGLGLKEKEEAVVAAAAGLEEASAAVAVGAGGAPTGPAVIGPSLPLALAMPLPEPEPLPLPLEVVRGLLPPLRIPELLSLRPRPRPPRPEPPPGLMALEVPEPMGEDKKKGKPEKLKRCIRTAAGSSWEDPSLLEWDADDFRIFCGDLGNEVNDDILARAFSRFPSFLKAKVIRDKRTGKTKGYGFVSFKDPSDYVRAMREMNGKYVGSRPIKLRKSMWKDRNLDVVRKKQKEKKKLGLR