Sequence details NCBI ID: XM_004858773.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Pop4
Gene Name processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae), transcript variant X1
Entrez Gene ID 101709670

Database interlinks

Part of NW_004624794.1 (Scaffold)

For more information consult the page for NW_004624794.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

POP4 ENSCPOG00000002992 (Guinea pig)

Gene Details

processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002715, Guinea pig)

Protein Percentage 88.18%
CDS Percentage 87.88%
Ka/Ks Ratio 0.27846 (Ka = 0.086, Ks = 0.3088)

POP4 ENSG00000105171 (Human)

Gene Details

processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSP00000465213, Human)

Protein Percentage 82.73%
CDS Percentage 82.12%
Ka/Ks Ratio 0.16159 (Ka = 0.1067, Ks = 0.6602)

Pop4 ENSMUSG00000030423 (Mouse)

Gene Details

processing of precursor 4, ribonuclease P/MRP family, (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000032585, Mouse)

Protein Percentage 81.36%
CDS Percentage 80.3%
Ka/Ks Ratio 0.20673 (Ka = 0.135, Ks = 0.6529)

Pop4 ENSRNOG00000027646 (Rat)

Gene Details

processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae) (Pop4), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000020474, Rat)

Protein Percentage 81.82%
CDS Percentage 81.52%
Ka/Ks Ratio 0.18604 (Ka = 0.1188, Ks = 0.6385)

Genome Location

Sequence Coding sequence

Length: 729 bp    Location: 4791675..4799307   Strand: +
Raw sequence   
>XM_004858773.1
ATGGGAGCTCGATGGGTAGACAGATGGATCAGTGAAGACTGGCTCTCAGAAGTGGCGGGTGGGAGTGCCTGGGGTCCTGGCAGCCCAGACCAGAACAGTGAGCACTGCATCACCCTGTCTCTGCAGCAACTGGGAGCCCAGAGGGCAGAAGCCTTTGTGAGCGCCTTCCTGAAGCGGAGCATGCCCCACATGAGCCAGCAGGCCTGTGAGAACCAGTTGCAGCGCAAAGCTGTTATTCTGGAGTACTTCACTCGCCGGAAGCGCAAGGAGAAGAAAAAAAAATCAAAAGGCCTCTCTGCCAGGGAGAGGAGAGATCTACAGCTCTTTGACATTAAACCAGAGCAACAGAGGTATAATCTTTTTCTCCCTCTCCATGAACTCTGGAAACAGTACATCCGGGACCTGTGCAATGGCCTCAAGCCAGACACGCAGCCACAGATGATTCAAGCCAAGCTGTTAAAGGCGGATCTTCATGGTGCTATTATTTCAGTCACAAAGTCCAAATGCCCCTCATACGTGGGTGTAACGGGAATCCTTCTACAGGAGACAAAGCATGTTTTCAAAATCATCACCAAAGAAGATCGCCTGAAAGTTATCCCCAAGCTAAATTGTGTGTTTGCTATAGAAATCGATGACTTTATTTCCTACATTTATGGGAGTAAATTCCAGCTTCGGTCAAGTGAGAGGTCTGCCAAGAAGTTCAAAGGAAAAGGAACAATTGACCTGTGA

Related Sequences

XP_004858830.1 Protein

Pop4 PREDICTED: ribonuclease P protein subunit p29 isoform X1 [Heterocephalus glaber]

Length: 242 aa      View alignments
>XP_004858830.1
MGARWVDRWISEDWLSEVAGGSAWGPGSPDQNSEHCITLSLQQLGAQRAEAFVSAFLKRSMPHMSQQACENQLQRKAVILEYFTRRKRKEKKKKSKGLSARERRDLQLFDIKPEQQRYNLFLPLHELWKQYIRDLCNGLKPDTQPQMIQAKLLKADLHGAIISVTKSKCPSYVGVTGILLQETKHVFKIITKEDRLKVIPKLNCVFAIEIDDFISYIYGSKFQLRSSERSAKKFKGKGTIDL