Sequence details NCBI ID: XM_004858772.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Vstm2b
Gene Name V-set and transmembrane domain containing 2B
Entrez Gene ID 101709321

Database interlinks

Part of NW_004624794.1 (Scaffold)

For more information consult the page for NW_004624794.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

VSTM2B ENSCPOG00000022127 (Guinea pig)

Gene Details

V-set and transmembrane domain containing 2B

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000015714, Guinea pig)

Protein Percentage 96.26%
CDS Percentage 95.64%
Ka/Ks Ratio 0.09249 (Ka = 0.0162, Ks = 0.1754)

VSTM2B ENSG00000187135 (Human)

Gene Details

V-set and transmembrane domain containing 2B

External Links

Gene Match (Ensembl Protein ID: ENSP00000335038, Human)

Protein Percentage 91.49%
CDS Percentage 90.54%
Ka/Ks Ratio 0.10074 (Ka = 0.0402, Ks = 0.3992)

Vstm2b ENSMUSG00000039257 (Mouse)

Gene Details

V-set and transmembrane domain containing 2B

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000044002, Mouse)

Protein Percentage 86.88%
CDS Percentage 82.74%
Ka/Ks Ratio 0.09704 (Ka = 0.0773, Ks = 0.7966)

Vstm2b ENSRNOG00000017456 (Rat)

Gene Details

V-set and transmembrane domain containing 2B (Vstm2b), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000023672, Rat)

Protein Percentage 85.46%
CDS Percentage 82.98%
Ka/Ks Ratio 0.10636 (Ka = 0.082, Ks = 0.7711)

Genome Location

Sequence Coding sequence

Length: 849 bp    Location: 4736044..4762221   Strand: +
Raw sequence   
>XM_004858772.1
ATGGAACAGCGGAACCGGCTCGGCGCCCTCGGATACCTGCCGCCTCTGCTGCTGCACGCCCTGCTGCTCTACGTGGCCGACGCTACGTTCACCGAAGTCCCCAAAGATGTGACAGTACGGGAGGGAGACGACATCGAAATGCCCTGCGCGTTCCGGGCCAGTGGAGCCACCTCATATTCGCTGGAGATTCAGTGGTGGTATCTCAAGGAGCCGCCGCGGGAGCTGCTGCACGAGCTGGCGCTCAGCGTGCCCGGCGCCCGGAGCAAGGTAACAAATAAGGATGCAACTAAAATCAGCACGGTGCGCGTCCAGGGCAATGACATCTCGCACCGGCTTCGGCTGTCGGCCGTGCGCCTGCAGGACGAGGGCGTGTACGAGTGCCGCGTGTCGGACTACAGCGACGACGACACGCAGGAGCACAAGGCCCAGGCGCTGCTGCGCGTGCTCTCGCGCTTCGCGCCGCCCAACATGCAGGCTGCCGAGGCTGTGTCGCACATCCAGAGCAGCGGTCCACGGCGCCACGGCGCCGCCCACCCCAACCACGCGGGCACCGCGGGCCGCACCACCTCTGAGCCCGGCCAAAGCGACAAGAGCCAGCTGCCTGGGAGCCCTCCTGCCGCCCACGGACCCGAAGTCCCCGAGGCCGCTGCCGCCTCCGTGGCCCACACGGCCACCACCACTGTGGCGGCTGCAGCCGCGGCTTCGTCGGCGTCTCCGCCACCCCGCCGGGCGGTGCTTCTGCGCCAGAGACACGGCTCAGGCACTGGCCCTAGCTCTGCCACAGACCCGCTCCTGTCCCTGCTCCTGTTAGCACTGCATAAGCTCCTTCGCCTGCTGCTGGGGCACTGA

Related Sequences

XP_004858829.1 Protein

Vstm2b PREDICTED: V-set and transmembrane domain-containing protein 2B [Heterocephalus glaber]

Length: 282 aa      View alignments
>XP_004858829.1
MEQRNRLGALGYLPPLLLHALLLYVADATFTEVPKDVTVREGDDIEMPCAFRASGATSYSLEIQWWYLKEPPRELLHELALSVPGARSKVTNKDATKISTVRVQGNDISHRLRLSAVRLQDEGVYECRVSDYSDDDTQEHKAQALLRVLSRFAPPNMQAAEAVSHIQSSGPRRHGAAHPNHAGTAGRTTSEPGQSDKSQLPGSPPAAHGPEVPEAAAASVAHTATTTVAAAAAASSASPPPRRAVLLRQRHGSGTGPSSATDPLLSLLLLALHKLLRLLLGH