Sequence details NCBI ID: XM_004858767.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Spta1
Gene Name spectrin, alpha, erythrocytic 1 (elliptocytosis 2)
Entrez Gene ID 101706547

Database interlinks

Part of NW_004624794.1 (Scaffold)

For more information consult the page for NW_004624794.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SPTA1 ENSCPOG00000001867 (Guinea pig)

Gene Details

spectrin, alpha, erythrocytic 1 (elliptocytosis 2)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000018265, Guinea pig)

Protein Percentage 85.62%
CDS Percentage 88.85%
Ka/Ks Ratio 0.31701 (Ka = 0.0817, Ks = 0.2578)

SPTA1 ENSG00000163554 (Human)

Gene Details

spectrin, alpha, erythrocytic 1 (elliptocytosis 2)

External Links

Gene Match (Ensembl Protein ID: ENSP00000357129, Human)

Protein Percentage 79.39%
CDS Percentage 83.19%
Ka/Ks Ratio 0.27806 (Ka = 0.1288, Ks = 0.4632)

Spta1 ENSMUSG00000026532 (Mouse)

Gene Details

spectrin alpha, erythrocytic 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000027817, Mouse)

Protein Percentage 82.09%
CDS Percentage 81.84%
Ka/Ks Ratio 0.15078 (Ka = 0.1082, Ks = 0.7173)

Spta1 ENSRNOG00000003537 (Rat)

Gene Details

spectrin, alpha, erythrocytic 1 (elliptocytosis 2) (Spta1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000061853, Rat)

Protein Percentage 81.93%
CDS Percentage 81.79%
Ka/Ks Ratio 0.15672 (Ka = 0.1103, Ks = 0.7039)

Genome Location

Sequence Coding sequence

Length: 7230 bp    Location: 2715936..2638605   Strand: -
Raw sequence   
>XM_004858767.1
ATGGAGAGCAGTGGGCCAAAGGTTTTGGAGACAGCAGAAGAAATCCAGCAGAGGCGTCAGGAAGTGTTGAATCGCTACCAGAGGTTCAAAGAACGGGTTGCTGAGCGGGGTCAGAAGCTCGAGGAGTCCTACCACTACCAGGTTTTCAGGCGAGATGTAGATGACCTGGAAAAGTGGATCTTGGAGAAGATCAAGATCGTAGAGGATAAAAACTATAAAGAAACACCTACTACCATAAAGGGAAAACACCTGAAGCATGAGGCCTTTGCAGGGGAGATACAAGCAAAATCCAATGCCCTTCCTGAACTGGAAGAAATCAGGGAAGCCCGGTTCACTGAAGATCATTTTGCTCATGAAGATACCAAGACCCATCTGGAGGAACTACGCCGCCTGTGGGACCTACTGCTGGAGCTGACCAAGGAGAAGAGCGACTGGCTACTACAGGCCCTGAAGTTCTATCAGTACTTCCTGGAGTGTGGTGACGTCTTGGAGTGGATCAAGGAGAAGAAATCTATAGTGACATCTACAGAGCTGGGTGAGGCCTGGGAGCGCACAGAATTTTTGCATAAGAAGTTTGAAGAGTTCCAGGAGGAGCTGTCCGCTCGAAAGAGGAGAGTGGATGAAGTGAACAAGTATGCCAATGACTGCGCTGAGGAGAACCATCCTGACCTGCCTGTAATAAAGTTAGAGCAGGATGAGGTAAATGCTGCCTGGGAGGATCTCTGTAATCTGGCTTTCCAGAGAAGGGAAACTTTGTCCAGTGCTGCAGACCTTCAGCGATTCAAAAGGGATGTGACCGAAGCCATCCAATGGATCAAGGAGAAGGAGCCTGTTCTCACCTCTGAGGACTATGGCAAAGATCTTGTTACTTCTGAGGCCCTGTTTCACAGTCACAAGGGACTGGAGAGGAACCTTGCAGTTATGGAGGACAAGGTAAAGGAGCTATGTGCCAAAGCAGACAAGTTGATGATCTCCCATCCTTCGGATGAACCTCAGATCAAGCAAATGAAAGAAGATCTGGTCTCCAATTGGGAGCACATTCGTGTCTTGGCTACTGCCAGATATGTGAAGCTGCAGGCTTCTTATGGGTTCCATCGGTTCTTATCAGACTATGATGAGCTATCTGGCTGGATGGATGAAAAGACTGCTCTGATCAATGCTGATGAGCTGCCAACAGATGTGGCTGGAGGGGAAGCCCTACTAGACAGACACCAGCAGCATAAGCATGAGATTGACTCTTACGATGACCGATTTCAATCTGCTGATGAGACTGGTGGAGAACTACTGGAGGGCAAGCACGAAGCCTCTGATGAAATTCGGGAAAAGATGACAACACTTGCCAATGCCTGGGCCACCCTGCTGGAGCTGTGGGACAAGCGTCAGCATCAGTACCAGCAGTGCTTGGACTTTCACCTCTTCTGCCGAGACAGTGAGCAAGTGGACAGCTGGATGAGTAGACAAGAGGCCTTTCTGGAAAATGAGGACTTGGGAAGCTCAGTGGGGAGTGTAGAAGCCCTGCTTCAGAAGCATGATGACTTTGAGGAAGCCTTTACTGCCCAGGAAGAGAAGATCATAACCTTGGATGAGACTGCCACCAGACTGATTGACAATGACCATTATGATTCAGAGAACATTGCTGCTATCCGCGATGGGCTATTGGCCCGGCGGGATGCCCTACGTGAAAGGGCTGCAGTTAGACGGAAACTGCTGTCAGATTCTCTGCTTTTGCAACGTCTGTATCAGGACTCAGACTATCTAAAAAACTGGATCAACAAGAAGAAAAAGCTGGCAGATGATGAAGATTACAAGGATACACAGAACTTGAAAAGTCGTGTTCAGAAGCAGCAAGAGTTTGAAAAGGAATTGGAAGCTAATGAAATCATGCTGAACAGCCTTGAGAAAACGGGGCAGGAGATGGTGGGTGGTGGTCACTATGCTTCGGAGGCTGTGACAGCCCGTGTCAGTGAGATTATCGGCCTCTGGAAGGAGTTGCTTGAGGCAACAGCACAAAAAGGGACCCAGTTGCATGAAGCGAATCAGCAACTACTATTTGAAAATAATGCAGAAGACCTGAAGCGCTGGCTGGATGAGGTGGAGGGTCAGGTCACCTCCGAGGACTATGGGAAAGGCCTGGCTGATGTACAGAATCTACTCAGGAAACATGGCCTCTTGGAATCAGCTGTGATTGCTCGTCAGAATCAAGTGGAAACCCTCACAGACATGGCTGTACATTTTGAAGAAATAAGCCATCCTGATTCTGAGGACATGCGGGCAAGGCAGGAGTCCTTGATGTCCCGATTTGAAGCTCTAAAAGAGCCACTGGCTACCCGGAAAAAGAAGCTGATTGATCTACTCCATCTGCAGCAGATTTGCAGAGACTCAGAGGATGAGGAGGCCTGGATCCAAGAGACTGAACCCTCGGCAGCTTCCACCTACCTTGGCAAGGACTTGGTTGTAGCCAAGAATCTTTTGAACAGGCACCAAGTCATCCTGGCAGATATCGCCAGCCACGAGCCACGTATCAGAGTGATCACGGAGAGGGGAAACACAATGGTAGAGGAAGGACACTTTGCTGCAGAAGATATAGCCTCACGGGTTGATAGCCTGAACAAGAACATGGAGTCTCTCTGTGCACGAGCTAAGAGGCGGCATGATGATCTTGAGGCTAACGTCCATTTCCAGCAATACCTGGCTGACCTGCATGAAGCAGAAGCATGGATTAGAGAGAAGGAGCTGATTGTAGACAACACCAACTATGGGGCTGATGAAGAAGCAGCTGGGGCTCTTCTCAAGAAGCATGAGGCCTTCCTGGTGGATCTCAATGCATTTGGAAACAGTATGAAAGCACTACAGGATCAAGCAGAAGCCTGCCAGCAACAACAGGCAGCACCAGTGGGGGACGCTGCTCAAGAAGTGAGAGTAGTGGCTTTATTCGACTTCCAGGCCCGTAGCCCTCGAGAAGTCACCATGAAGAAGAATGATGTCTTAACTCTGCTCAGTTCCATCAACAAGGACTGGTGGAAGGTTGAAGCTGATGATCACCAGGGTTTTGTCCCAGCGAACCATGTCAGGAAACTGGCCCCAGATGAGCTCCCGATGCTCCCACAGAGGCGACGGGAGGAGCCAGGCAACATAGCCCAGAGCCAGGAGCAGATTGAACACCTGTACGGCACCCTCCTTGATCGGGCAGAAGAACAGAGACGTCGTCTACTGCAACGTTACAATGAGTTCCGGCTGGCTTATGAGGCAGGAGATATGCTGGAGTGGATCCAAGAGAAAAAGGCAGAAAACACTGGAATTCAGCTAGATGATGTCTGGGAGCTGCAGAAAAAGTGTGATGAGTTCCAAAGGGATTTGAAGACCAATGAGCCTCGGCTAAGGGAAATCAACAAGGTAGCTGATGAACTGCTATTTGAGAAACTTCTAACACCAGAAGGTGCTCATGCCCGGCAGGAATTGAATACCCGCTGGGATTCCTTGCAGATGCTTGCAGATGAGCAGCAACAACTGCTAAGCAGTGCCCATGCTGTCCAGGTATTCCACAGAGAAGCAGATGACATGAAAGAGCAGATTGAGAAGAAATGCCAGGCCCTCAGGGTTTCTGACCCTGGCTCAGACCTGCTCAGTGTTCAGGCCCTTCAGCGCCAGCATGAGGTCTTTGAGAGAGACCTCATCCCCCTGGAGGAGAAGGTTATCATGCTGGTGGGAACAGCAGAAAGGCTCAGTGAGTCCCACCCAGATGCTACTGGGGACCTGCAGAGACAGCGAGCAGAGCTGAACAAGGCCTGGGATGACTTGAAGGAGCTTACAAAGGATCGCAAGGAGAGCCTGAGTGAGGCTCACAAATTCTACCTGTTTCTCAGTAAGGCCAGCGACCTGGAGAATTGGATGAAAGTCATGGGTGGTATGGTGTCATCACAGGAGCTGGGGAGTGACTTAACTGCCACAGAGATCTTGCTAGAGCGACACCAGGAACATCATAGTGAAATGGAGGCAGAGATCCCCACCTTTCAGGCCTTAGAAGAGTTTGGCAGACAACTTATTGACAGTGGGCATAGTAAGAGCCCTGAAATTGAGAAAAAGCTTCAAGCTATCCAACAAAGCAGAGATAATTTGGAGAAAGCTTGGGAAGACCGCACAAAGATGCTAGAGCAATGCCTGGAATTGCAGTTCTTCCAAGGAGATTGCGAACAGGTTGAGAGCTGGATGGTGGCACGTGAGAATTCCCTGAGATCAGATGACAAGGATTCCTTAAGTAGTCTAGAGGCTTTGGTGAAGAAACGAGATGATTTGAAAACAGCAATCTCTGCCCAGGAAGAAAAGATCACCAACCTAGAAGAATTTGCTGATCGGCTTATAGCTGATGACCACTATGCCAAGCGAGAGATTGCTGCTCGTCTCCAAAAAGTGCTAGACAGATGGAATGCTCTTAAGGAACTGCTGAGTGCTGAGCGGGAAAAGCTTGGGAATCTGGCTGACCTGAAACAATTCTACCGTGACCTTGAGGAACTGAAAGAATGGATTGAAGAGATGCTACCTACAGCCTGTGATGAATCCTACAAAGACACCACCAACATACAGAGGAAGTATCTGAAACACAGGACATTTGAAAAAGAAGTCACTGGTCGAGAACAGGAAGTAGAAGGAGTCATGGAACTGGGCAAGTCCCTGATTGAGCGAAAGGCATGTGATGGCAATGAAGAGACTGTAGAGAATCAGCTGCAAGACCTAAAGGAACAGTGGGAATACCTCTATGAGAGAACAACTGATAAAGGGAAGAAGCTTGACGAGGCGAGTCGCCAACAGAGGTTCACCACAGGCATTCGGGACTTCGAGTTCTGGCTCTCAGAGGCAGAGACATTGTTGGCTATGAAAGATCAGGCCAAGGACTTAGCTTCAGCAGGAAACCTGCTCAAGAAGCACCAGCTACTGGAAACAGAGATGTTGGCTCGAAAGGATGCACTTGAGGACCTGAATAATTTGGCTCAGGATCTGGTCTCCAGTGGAACTTTCAACATTGACCAGATAAAAAAGAAAGAGAAGAGTATCAATGAACGCTTTGAGAGTGTCCAAGACATGGCAGCTGCACACCATGAGAAACTGAAAGTAGACTATGCCTTGTTCCAGTTCTTTCAGGACCTAGATGATGAGGAGTCGTGGATAGAGGAGAAGTTGTTAGGAGTGAGCTCCCAGGATTATGGCAAAGATCTTCAGAGTGTTCAGAACTTAATGAAAAAGCACAAACGCCTAGAGGGGGAACTGGTGGCCCATGAATCTGCTGTCCAGAATGTTCTGGGTATGGCAGAAAGCTTGAAAGACAAGGCTGCTGTGGGACAACAAGAGATCCAGGAGCGGATGGCTCAGTTTGTTGAACACTGGGAGAAGCTCAAAGAGTTGGCCAATGCTCGAGGCCTTCATCTGGAAGAGTCTCTGCAGTACATGCAGTTCATGGAGAATGCAGAGGAGGAAGAAGTGTGGGTCGGGGAGAAGGAAGCTATGGTTGCCCGAGGAGATTCTGGAGACACACTGACTGCTACTCAGAACCTGCTAAAGAAGCATGAAGCTTTGGCTAGTGACTTCACTGTTCATGAGACTCGAGTGCAAAATTTGTGTGCACAAGGAGAAGACATCCTGAGTAAGGAGGAAAGTAAAAACAAGGAGAAGATTTCTGCTAAGATTGCAGCTCTGAATGAAATGACTTCTTCTCTTGACAAGGCACTAGCTTCTTGGAAGTTGCAATTGGAAGATGATGTTGCCTTTCAGCAGTTCAACTGGAAGGCTGATGTGGCAGAGTCCTGGATAGGTGAGAAAGAAGTAAGCCTGAAAATAAAAGCCAATGGTGCAGACCTCACTGCCTTTCTCATGCCATTGGCGAAACAGGACACACTGGATGCCAGTCTTCAAACCTTCCAGAAAGAACAACTTTCTGAGATCACTGACCTCAAAGACCAATTGCTGGCTGCTCAGCACAGCCAGGCCAAAGCCATTGAGGAGCGCCATGCTGCCCTGCTGAAGCGCTGGGAGCAGTTGCTGGAAGCGGCTGCAACCCACAGACAGAAACTGCTGGAGAAGCAGTTGCCTCTACAGCAGGCTGAGGAGCTGTTCATGGAGTTTGCACACAAGGCTTCAGCTTTCAACAACTGGTGTGAGAATGCAGAGGAGGACCTATCAGAGCCTGTGCACTGTGTTTCCCTGAATGAGATTCGGCAGCTGCAGAAGGACCATGAGGCATTTGTGGCTTCCCTGGTTGGGCCTCAAGAAGACTTTAAGTATTTACTAGAGCTTGACCAGAAGATTAAGGCCTTAAATGTGCCTTCTAGCCCTTACACCTGGCTGACAGTGGAGGTGCTGGAAAGGATCTGGAAACACTTATCTGAGGTCGTCAAGGAGCGGGAGCAGGAGCTGCAAAAAGAAGAGGAAAGACAGATGAAGAACTTTGAGATGTGCCAAGAGTTTGAACAGAATGCCAGTGCCTTCCTTCAGTGGATCCAGGAGACCAGGTCTTATTTTCTGGATGGATCTTTGCTCAAAGAAACAGGAACTCTGGAATCCCAACTGGAGGCAAATAAAAGGAAACAGAAGGAGATCCAAGCAATGAAGCGTCAGCTAACCAAGATTGAGGACCTGGGGGACAGCATGGAGGAGGCTCTGATCCTTGACATAAAATACAGCACCATTGGACTGGCCCAGCAGTGGGACCAGCTCCACCAACTGGGGATGCGGATGCAGCACAACCTGGAGCAGCAGATCCAAGCCAAGGATACCATAGGTGTGAGTGAGGACACGCTAAAGGAGTTTAGTACCACCTATAAACATTTTGATGAAAATTTGACAGGGCGTTTGACTCACAAGGAATTCCGATCCTGCTTGAGAGGACTCAATTACTATTTGCCCATGGTAGAGGATGATGAACCTGAGCCCAAGTTTCAGAAATTCTTGGATGCTGTGGATCCAGGGAGGAAGGGCTATGTCTCACTGGAGGATTACACGTCTTTCCTGATTGACAAGGAGTCGGAAAATATCAAGACCAGCGATGACATAGAGAGTGCTTTCCAGGCTCTGGCAGAGGGAAAGTCTTACATTACCAAAGACGACCTGAAACAGGCCCTCACTCCAGAACAAGTGTCATTCTGTACCATACATATGCAGCAATATGTGGACCCACGAGGTCGAAGCCAACCCGCTGGCTATGATTATGTTGGCTTCACCAATTCCTACTTTGGTAACTGA

Related Sequences

XP_004858824.1 Protein

Spta1 PREDICTED: spectrin alpha chain, erythrocytic 1 [Heterocephalus glaber]

Length: 2409 aa      View alignments
>XP_004858824.1
MESSGPKVLETAEEIQQRRQEVLNRYQRFKERVAERGQKLEESYHYQVFRRDVDDLEKWILEKIKIVEDKNYKETPTTIKGKHLKHEAFAGEIQAKSNALPELEEIREARFTEDHFAHEDTKTHLEELRRLWDLLLELTKEKSDWLLQALKFYQYFLECGDVLEWIKEKKSIVTSTELGEAWERTEFLHKKFEEFQEELSARKRRVDEVNKYANDCAEENHPDLPVIKLEQDEVNAAWEDLCNLAFQRRETLSSAADLQRFKRDVTEAIQWIKEKEPVLTSEDYGKDLVTSEALFHSHKGLERNLAVMEDKVKELCAKADKLMISHPSDEPQIKQMKEDLVSNWEHIRVLATARYVKLQASYGFHRFLSDYDELSGWMDEKTALINADELPTDVAGGEALLDRHQQHKHEIDSYDDRFQSADETGGELLEGKHEASDEIREKMTTLANAWATLLELWDKRQHQYQQCLDFHLFCRDSEQVDSWMSRQEAFLENEDLGSSVGSVEALLQKHDDFEEAFTAQEEKIITLDETATRLIDNDHYDSENIAAIRDGLLARRDALRERAAVRRKLLSDSLLLQRLYQDSDYLKNWINKKKKLADDEDYKDTQNLKSRVQKQQEFEKELEANEIMLNSLEKTGQEMVGGGHYASEAVTARVSEIIGLWKELLEATAQKGTQLHEANQQLLFENNAEDLKRWLDEVEGQVTSEDYGKGLADVQNLLRKHGLLESAVIARQNQVETLTDMAVHFEEISHPDSEDMRARQESLMSRFEALKEPLATRKKKLIDLLHLQQICRDSEDEEAWIQETEPSAASTYLGKDLVVAKNLLNRHQVILADIASHEPRIRVITERGNTMVEEGHFAAEDIASRVDSLNKNMESLCARAKRRHDDLEANVHFQQYLADLHEAEAWIREKELIVDNTNYGADEEAAGALLKKHEAFLVDLNAFGNSMKALQDQAEACQQQQAAPVGDAAQEVRVVALFDFQARSPREVTMKKNDVLTLLSSINKDWWKVEADDHQGFVPANHVRKLAPDELPMLPQRRREEPGNIAQSQEQIEHLYGTLLDRAEEQRRRLLQRYNEFRLAYEAGDMLEWIQEKKAENTGIQLDDVWELQKKCDEFQRDLKTNEPRLREINKVADELLFEKLLTPEGAHARQELNTRWDSLQMLADEQQQLLSSAHAVQVFHREADDMKEQIEKKCQALRVSDPGSDLLSVQALQRQHEVFERDLIPLEEKVIMLVGTAERLSESHPDATGDLQRQRAELNKAWDDLKELTKDRKESLSEAHKFYLFLSKASDLENWMKVMGGMVSSQELGSDLTATEILLERHQEHHSEMEAEIPTFQALEEFGRQLIDSGHSKSPEIEKKLQAIQQSRDNLEKAWEDRTKMLEQCLELQFFQGDCEQVESWMVARENSLRSDDKDSLSSLEALVKKRDDLKTAISAQEEKITNLEEFADRLIADDHYAKREIAARLQKVLDRWNALKELLSAEREKLGNLADLKQFYRDLEELKEWIEEMLPTACDESYKDTTNIQRKYLKHRTFEKEVTGREQEVEGVMELGKSLIERKACDGNEETVENQLQDLKEQWEYLYERTTDKGKKLDEASRQQRFTTGIRDFEFWLSEAETLLAMKDQAKDLASAGNLLKKHQLLETEMLARKDALEDLNNLAQDLVSSGTFNIDQIKKKEKSINERFESVQDMAAAHHEKLKVDYALFQFFQDLDDEESWIEEKLLGVSSQDYGKDLQSVQNLMKKHKRLEGELVAHESAVQNVLGMAESLKDKAAVGQQEIQERMAQFVEHWEKLKELANARGLHLEESLQYMQFMENAEEEEVWVGEKEAMVARGDSGDTLTATQNLLKKHEALASDFTVHETRVQNLCAQGEDILSKEESKNKEKISAKIAALNEMTSSLDKALASWKLQLEDDVAFQQFNWKADVAESWIGEKEVSLKIKANGADLTAFLMPLAKQDTLDASLQTFQKEQLSEITDLKDQLLAAQHSQAKAIEERHAALLKRWEQLLEAAATHRQKLLEKQLPLQQAEELFMEFAHKASAFNNWCENAEEDLSEPVHCVSLNEIRQLQKDHEAFVASLVGPQEDFKYLLELDQKIKALNVPSSPYTWLTVEVLERIWKHLSEVVKEREQELQKEEERQMKNFEMCQEFEQNASAFLQWIQETRSYFLDGSLLKETGTLESQLEANKRKQKEIQAMKRQLTKIEDLGDSMEEALILDIKYSTIGLAQQWDQLHQLGMRMQHNLEQQIQAKDTIGVSEDTLKEFSTTYKHFDENLTGRLTHKEFRSCLRGLNYYLPMVEDDEPEPKFQKFLDAVDPGRKGYVSLEDYTSFLIDKESENIKTSDDIESAFQALAEGKSYITKDDLKQALTPEQVSFCTIHMQQYVDPRGRSQPAGYDYVGFTNSYFGN