Details from NCBI annotation

Gene Symbol Casq1
Gene Name calsequestrin 1 (fast-twitch, skeletal muscle)
Entrez Gene ID 101720357

Database interlinks

Part of NW_004624794.1 (Scaffold)

For more information consult the page for NW_004624794.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CASQ1 ENSCPOG00000014914 (Guinea pig)

Gene Details

calsequestrin 1 (fast-twitch, skeletal muscle)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013439, Guinea pig)

Protein Percentage 96.9%
CDS Percentage 94.66%
Ka/Ks Ratio 0.0898 (Ka = 0.0163, Ks = 0.1816)

CASQ1 ENSG00000143318 (Human)

Gene Details

calsequestrin 1 (fast-twitch, skeletal muscle)

External Links

Gene Match (Ensembl Protein ID: ENSP00000357057, Human)

Protein Percentage 95.31%
CDS Percentage 93.06%
Ka/Ks Ratio 0.08583 (Ka = 0.0223, Ks = 0.2596)

Casq1 ENSMUSG00000007122 (Mouse)

Gene Details

calsequestrin 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000003554, Mouse)

Protein Percentage 95.61%
CDS Percentage 90.61%
Ka/Ks Ratio 0.0544 (Ka = 0.0221, Ks = 0.4067)

Casq1 ENSRNOG00000006930 (Rat)

Gene Details

calsequestrin 1 (fast-twitch, skeletal muscle) (Casq1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000009344, Rat)

Protein Percentage 96.64%
CDS Percentage 90.78%
Ka/Ks Ratio 0.03908 (Ka = 0.0167, Ks = 0.428)

Genome Location

Sequence Coding sequence

Length: 1164 bp    Location: 1064644..1054530   Strand: -
>XM_004858724.1
ATGGGGGCCAGAGCAGTGCTGCTGTTCCTGCTGGTGCTAGGGACACTCAAGTCAGGGGTCCAGGGGGAGGAAGGGCTGGACTTCCCTGAGTATGATGGTGTCGACCGTGTGATCAATGTCAACGCAAAGAACTACAAGAATGTGTTCAAGAAGTATGAGGTGCTGGCACTCCTCTACCATGAACCCCCCGAGGATGACAAGGCCTCACAGAGACAATTTGAGATGGAGGAGCTGATCCTAGAGTTAGCAGCCCAAGTCCTAGAAGACAAGGGTGTTGGCTTCGGGCTGGTGGACTCTGAGAAGGACGCAGCTGTGGCCAAGAAACTAGGACTAACTGAAGAGGACAGCATTTATGTGTTCAAGGGGGATGAAGTCATTGAGTATGACGGCGAGCTCTCTGCAGACACCCTGGTGGAGTTTCTGCTGGATGTCCTAGAAGACCCTGTGGAATTAATTGAGGGTGAAAAAGAGCTTCAGGCATTTGAGAATGTCGAGGATGAGATCAAACTCATTGGCTACTTCAAGAACAAAGACTCAGAGCATTACAAAGCCTATGAAGATGCAGCCGAAGAGTTTCATCCCTACATCCCCTTCTTCGCCACCTTTGACAGCAAGGTGGCAAAGAAGCTGACCCTGAAGCTGAATGAGATCGATTTCTATGAGGCCTTCATGGAAGAGCCTGTGACCATCCCAGACAAACCCAACAGTGAAGAGGAGATTGTCAACTTCGTGGAGGAGCACAGGAGATCAACTCTGAGGAAACTGAAGCCTGAAAGTATGTATGAGACCTGGGAGGACGATCTGGATGGAATCCACATCGTGGCCTTTGCTGAGGAAGCTGATCCCGATGGCTACGAGTTTTTAGAGACTCTCAAATCTGTGGCCCAAGATAACACTGACAACCCTGATCTCAGCATTATCTGGATCGACCCTGATGACTTCCCTCTGCTGGTTCCATACTGGGAGAAGACATTTGACATCGACTTGTCAGCCCCACAAATAGGAGTCGTCAATGTTACTGATGCGGATAGCATATGGATGGAGATGGATGATGAGGAGGACCTGCCTTCTGCTGAGGAGCTGGAGGACTGGCTGGAGGATGTGCTGGAGGGTGAGATCAACACAGAGGATGACGATGATGATGACAATGATGATGATGATTAG

Related Sequences

XP_004858781.1 Protein

Casq1 PREDICTED: calsequestrin-1 [Heterocephalus glaber]

Length: 387 aa      View alignments
>XP_004858781.1
MGARAVLLFLLVLGTLKSGVQGEEGLDFPEYDGVDRVINVNAKNYKNVFKKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDAAVAKKLGLTEEDSIYVFKGDEVIEYDGELSADTLVEFLLDVLEDPVELIEGEKELQAFENVEDEIKLIGYFKNKDSEHYKAYEDAAEEFHPYIPFFATFDSKVAKKLTLKLNEIDFYEAFMEEPVTIPDKPNSEEEIVNFVEEHRRSTLRKLKPESMYETWEDDLDGIHIVAFAEEADPDGYEFLETLKSVAQDNTDNPDLSIIWIDPDDFPLLVPYWEKTFDIDLSAPQIGVVNVTDADSIWMEMDDEEDLPSAEELEDWLEDVLEGEINTEDDDDDDNDDDD