Sequence details NCBI ID: XM_004858639.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Tnfsf13b
Gene Name tumor necrosis factor (ligand) superfamily, member 13b
Entrez Gene ID 101722011

Database interlinks

Part of NW_004624793.1 (Scaffold)

For more information consult the page for NW_004624793.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TNFSF13B ENSCPOG00000001343 (Guinea pig)

Gene Details

tumor necrosis factor (ligand) superfamily, member 13b

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001217, Guinea pig)

Protein Percentage 91.23%
CDS Percentage 88.11%
Ka/Ks Ratio 0.11692 (Ka = 0.0505, Ks = 0.4317)

TNFSF13B ENSG00000102524 (Human)

Gene Details

tumor necrosis factor (ligand) superfamily, member 13b

External Links

Gene Match (Ensembl Protein ID: ENSP00000365048, Human)

Protein Percentage 73.26%
CDS Percentage 73.99%
Ka/Ks Ratio 0.21279 (Ka = 0.188, Ks = 0.8836)

Tnfsf13b ENSMUSG00000031497 (Mouse)

Gene Details

tumor necrosis factor (ligand) superfamily, member 13b

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000033892, Mouse)

Protein Percentage 66.91%
CDS Percentage 69.33%
Ka/Ks Ratio 0.193 (Ka = 0.248, Ks = 1.2851)

Genome Location

Sequence Coding sequence

Length: 882 bp    Location: 3664241..3629425   Strand: -
Raw sequence   
>XM_004858639.1
ATGAGCCGGGCCCTGCGGTCGCTCACGCCGAGGCCCCGACCTACAAAGTGCGAGCGCGGAACGGATGAGCCCGCAGTGCGGTCCCGCCTTTTTCCCGGCCTGGAGGAAGCAGAGGAAATGAAGGCGGCGCGCGCTGCGATCCCGGCACAGCAGCGGAGCCCCTCGGCGCGCCCGTCCGGGACCTCGAGCCCGCTGCTGGCCGCGAGCCTGCTGCTGGCCCTGCTGTCGGGCGGCCTCACCGTGCTGTCCTTCCGCCGGGTGGCCGCGCTGCAGGCCGACCTGGACGGGCTCCGGGCGCAGCTGCAGGGCCCCCGGGCCTCGGGCGCCGCGGGCCCCACGGTGAGGGTGAGTGCGGGGTTGCGGGGGCTCCTCGCGCCCGCAGCGCCGGGACGCAACTCCAGCGGGAGCAGCCGGCAGAGGCGCGCCGCGGAGCGCCCGGGGGCAACAGTCACTCAAGACTGCTTGCAGCTGATCGCAGACAGCGACACCCCGACTATTCGCAAAGGATCATACACATTTGTACCATGGCTTCTGAGCTTTAAAAGAGGACGAGCCCTGGAGGAGAAAGAGAATAAGATAGTGGTGAAGGAACCTGGTTACTTCTTTATCTATGGCCAGGTGTTGTACACTGATAGCACTTTTGCCATGGGACACCTAATACAGAGGAAGAAAGTCCACGTCTTTGGGGACGAGCTGAGTCTGGTGACTCTGTTCCGCTGTATTCAGAATATGCCCGAGACACTACCCAATAATTCCTGTTATTCAGCTGGCATCGCAAAGCTGGAAGAGGGAGACGAAATCCAACTTGCAATCCCAAGGGAGAACGCGCAGATCTCTCGCGATGGGGACGGCACGTTTTTCGGTGCCCTGAAACTGCTGTGA

Related Sequences

XP_004858696.1 Protein

Tnfsf13b PREDICTED: tumor necrosis factor ligand superfamily member 13B [Heterocephalus glaber]

Length: 293 aa      
>XP_004858696.1
MSRALRSLTPRPRPTKCERGTDEPAVRSRLFPGLEEAEEMKAARAAIPAQQRSPSARPSGTSSPLLAASLLLALLSGGLTVLSFRRVAALQADLDGLRAQLQGPRASGAAGPTVRVSAGLRGLLAPAAPGRNSSGSSRQRRAAERPGATVTQDCLQLIADSDTPTIRKGSYTFVPWLLSFKRGRALEEKENKIVVKEPGYFFIYGQVLYTDSTFAMGHLIQRKKVHVFGDELSLVTLFRCIQNMPETLPNNSCYSAGIAKLEEGDEIQLAIPRENAQISRDGDGTFFGALKLL