Details from NCBI annotation

Gene Symbol Farp1
Gene Name FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived), transcript variant X3
Entrez Gene ID 101717806

Database interlinks

Part of NW_004624793.1 (Scaffold)

For more information consult the page for NW_004624793.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

FARP1 ENSCPOG00000001169 (Guinea pig)

Gene Details

FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001054, Guinea pig)

Protein Percentage 95.36%
CDS Percentage 93.05%
Ka/Ks Ratio 0.08384 (Ka = 0.0232, Ks = 0.2773)

FARP1 ENSG00000152767 (Human)

Gene Details

FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)

External Links

Gene Match (Ensembl Protein ID: ENSP00000322926, Human)

Protein Percentage 93.02%
CDS Percentage 89.72%
Ka/Ks Ratio 0.07324 (Ka = 0.0337, Ks = 0.4602)

Farp1 ENSMUSG00000025555 (Mouse)

Gene Details

FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000026635, Mouse)

Protein Percentage 92.26%
CDS Percentage 87.56%
Ka/Ks Ratio 0.0621 (Ka = 0.0384, Ks = 0.6179)

Farp1 ENSRNOG00000011203 (Rat)

Gene Details

FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived) (Farp1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000015271, Rat)

Protein Percentage 92.17%
CDS Percentage 87.11%
Ka/Ks Ratio 0.05841 (Ka = 0.0395, Ks = 0.6755)

Genome Location

Sequence Coding sequence

Length: 3105 bp    Location: 12870860..12595521   Strand: -
>XM_004858632.1
ATGGGAGAAATAGAGCAGAAGCCCACCCCAGGATCTCGCCTGGGGGCCCCAGAGAATTCAGGAATCAGCACCTTGGAGCGTGGACAGAAGCCGCCCTCAGCACCTTCAGGAAAACTCATGTCCATCAAAATCCAAATGCTGGATGACACCCAGGAAGCGTTTGAAGTCCCACAAAGAGCGCCGGGGAAGGTGCTGCTGGATGCAGTTTGCAACCACCTCAACCTCGTGGAAGGCGACTATTTTGGCCTCGAGTTTCCTGATCACAAAAAGATCACGGTGTGGCTGGATCTCTTAAAACCTATTGTGAAACAGATTCGAAGGCCAAAGCATGTTGTTGTTAAGTTTGTGGTGAAATTTTTTCCACCTGACCACACACAACTCCAAGAAGAACTCACAAGGTACCTGTTTGCTCTGCAGGTGAAGCAGGACCTGGCTCATGGCAGGTTGATGTGTAATGACACCAGCGCCGCGCTGTTGATCTCACACATTGTACAATCTGAGATTGGGGATTTTGATGAAGCATTGGACAGAGAGCACTTAGCGAAAAATAAGTACATACCTCAGCAAGATGCACTAGAAGACAAAATCATGGAATTTCACCATAACCACATTGGACAAACTCCAGCAGAGTCAGATTTCCAGCTCCTGGAGGTGGCCCGACGGCTGGAGATGTACGGAATCCGCTTGCACCCAGCCAAGGACAGGGAAGGCACTAAGATCAACTTGGCCGTGGCCAACACTGGGATCCTAGTGTTTCAGGGTTTCACCAAGATCAACGCCTTCAACTGGGCTAAGGTGCGGAAGCTGAGCTTCAAGAGAAAGCGCTTTCTCATCAAGCTCCGCCCCGATGTGAACAGCTCATACCAGGATACCTTGGAATTCCTAATGGCCAGTCGGGATTTCTGCAAGTCCTTCTGGAAAATCTGTGTTGAACATCATGCCTTTTTTAGACTTTTCGAAGAGCCCAAACCAAAACCAAAGCCTGTTCTCTTCAGTCGAGGTTCATCATTTCGGTTCAGCGGTCGGACTCAGAAGCAGGTTCTCGACTACGTTAAGGAAGGAGGACACAAGAAAGTGCAGTTTGAAAGGAAACACAGCAAGATTCATTCCATCAGGAGCCTTGCTACACATCCTACAGAACCAAATTCAGAAGTGCCAAAACAGTCTCCGAAGAGCGCCAGCCTTACATTTGGAGAAGGCGCCTCATCGCCCGGTGGCCAGAGCTGCCAGCAAGGAAAGGAACTGAAAGTTTCTGCTGAAGAGCCGGGGTCCCACCAGAGCCCCAGTCTGAAGAGGAGCCCTCCGGGGAACACACTGGCAGACAGAGCCACCCTGGTGCCGCAGGAGGAAGAGGATGAGGAGGAGGCTGTCAAGGACCGGATCCAGCCCAGCAAGCCTCAGCCCCTGCAGCCAAGCACAGGCTCCCTGACTGGTAGCCCTCACCTTTCAGAGCTGTCCATCAACTCACAGGGAGGAGCTGTCCCTGCCACTGCCACCCTGTCTCCCAACCTGAGTCCTGACACCAAGCAGGCCTCACCCTTGATCAGCCCGCTGCTGAGCGACCAGAGATTTCCAGCCGACAAGGCATACCACATTGCTAAAGAAGTGTCCACCACGGAGCGGACGTATCTGAAGGACCTTGAGGTCGTCACTTCGTGGTTTCAGAGCACAGTGAGCAAAGAGGACGCCATGCCCGAAACATTGAAAAGTCTGATATTCCTGAATTTTGAACCTTTGCACAAATTTCATACCAATTTTCTCAAGGAAATTGAGCAACGACTTGCCCTGTGGGAAGGCCGCTCAAACGCCCACATCAGAGGAGATTACCAAAGAATCGGCGACGTCATGCTCAAGAACATCCAGGGCATGAAGCACCTGGCGCCTCACCTGTGGAAGCACAGCGAGGCCCTGGAGGCGCTGGAGAACGCCATCAAGGGCTCGCGGCGGCTGGAGCACTTCTGCCGAGACTTCGAGCAGCAGAAGGTGTGCTACCTGCCGCTCAACACCTTCCTCCTGCGCCCGCTGCACCGCCTCATGCACTACAAGCAGGTGCTGGAGCGGTTGTGCAAGCACCACCCGCCGAGCCACGCCGACTTCAGGGACTGCCGAGCTGCGCTGGCAGAGATCACAGAGATGGTGGCCCAGCTGCATGGCACCATGATCAAGATGGAGAACTGCCAGAAGCTGCACGAGCTCAAGAAGGATCTCATTGGCATCGACAATCTTGTGACTCCAGGAAGGGAGTTCATCCGCCTGGGCAGCCTCAGCAAGCTCTCGGGGAAGGGCCTCCAGCAGCGCATGTTCTTCCTGTTCAACGATGTCCTGCTGTACACCAGCCGCGGGCTGACGGCGTCCAACCAGTTCAAGGTGCACGGGCAGCTGCCACTCTATGGCATGACGATGGAGGAGAGCGAGGACGAGTGGGGCGTGCCCCACTGCCTGACCCTGCGGGGCCAGCGCCAGTCCATCGTGGTGGCCGCCAGCTCCCGGGCCGAGATGGAGAAGTGGGTGGAGGACATCCAGATGGCCATCGACCTGGCAGAGAAGAGCAGCGGGCCCACTGCCGAGGTCCTCGCCAGCAGCCCTCCTGACAACAAGTCTCCCGATGAAGCCACAGCGGCGGACCAGGAGTCGGAGGACGACCTGAGCGCCTCGCGCACCTCCCTGGAGCGCCAGGCCCCGCACCGCGGCAACACGATGGTGCACGTGTGCTGGCACCGCAGCACCAGCGTCTCCATGGTGGATTTCAGCGTCGCCGTGGAGAACCAGCTGTCTGGGAACCTGCTGAGGAAATTCAAAAACAGCAACGGGTGGCAGAAGCTGTGGGTGGTGTTCACAAACTTCTGCCTGTTCTTCTACAAGTCGCACCAGGACAATCATCCCCTTGCCAGCCTGCCTCTGCTCGGATACTCGCTCACCATCCCCTCGGAGTCTGAGAACATCCACAAGGACTACGTGTTCAAGCTGCACTTCAAGTCCCACGTGTACTACTTCAGGGCCGAAAGCGAGTACACGTTTGAAAGGTGGATGGAAGTCATCCGGAGCGCCACCAGCTCAGCCTCTCGGGCCCACCTTCTGAGTCACAAAGAATCGCACATGTACTGA

Related Sequences

XP_004858689.1 Protein

Farp1 PREDICTED: FERM, RhoGEF and pleckstrin domain-containing protein 1 isoform X3 [Heterocephalus glaber]

Length: 1034 aa      View alignments
>XP_004858689.1
MGEIEQKPTPGSRLGAPENSGISTLERGQKPPSAPSGKLMSIKIQMLDDTQEAFEVPQRAPGKVLLDAVCNHLNLVEGDYFGLEFPDHKKITVWLDLLKPIVKQIRRPKHVVVKFVVKFFPPDHTQLQEELTRYLFALQVKQDLAHGRLMCNDTSAALLISHIVQSEIGDFDEALDREHLAKNKYIPQQDALEDKIMEFHHNHIGQTPAESDFQLLEVARRLEMYGIRLHPAKDREGTKINLAVANTGILVFQGFTKINAFNWAKVRKLSFKRKRFLIKLRPDVNSSYQDTLEFLMASRDFCKSFWKICVEHHAFFRLFEEPKPKPKPVLFSRGSSFRFSGRTQKQVLDYVKEGGHKKVQFERKHSKIHSIRSLATHPTEPNSEVPKQSPKSASLTFGEGASSPGGQSCQQGKELKVSAEEPGSHQSPSLKRSPPGNTLADRATLVPQEEEDEEEAVKDRIQPSKPQPLQPSTGSLTGSPHLSELSINSQGGAVPATATLSPNLSPDTKQASPLISPLLSDQRFPADKAYHIAKEVSTTERTYLKDLEVVTSWFQSTVSKEDAMPETLKSLIFLNFEPLHKFHTNFLKEIEQRLALWEGRSNAHIRGDYQRIGDVMLKNIQGMKHLAPHLWKHSEALEALENAIKGSRRLEHFCRDFEQQKVCYLPLNTFLLRPLHRLMHYKQVLERLCKHHPPSHADFRDCRAALAEITEMVAQLHGTMIKMENCQKLHELKKDLIGIDNLVTPGREFIRLGSLSKLSGKGLQQRMFFLFNDVLLYTSRGLTASNQFKVHGQLPLYGMTMEESEDEWGVPHCLTLRGQRQSIVVAASSRAEMEKWVEDIQMAIDLAEKSSGPTAEVLASSPPDNKSPDEATAADQESEDDLSASRTSLERQAPHRGNTMVHVCWHRSTSVSMVDFSVAVENQLSGNLLRKFKNSNGWQKLWVVFTNFCLFFYKSHQDNHPLASLPLLGYSLTIPSESENIHKDYVFKLHFKSHVYYFRAESEYTFERWMEVIRSATSSASRAHLLSHKESHMY