Sequence details NCBI ID: XM_004858591.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Tmtc4
Gene Name transmembrane and tetratricopeptide repeat containing 4, transcript variant X4
Entrez Gene ID 101704747

Database interlinks

Part of NW_004624793.1 (Scaffold)

For more information consult the page for NW_004624793.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TMTC4 ENSCPOG00000009886 (Guinea pig)

Gene Details

transmembrane and tetratricopeptide repeat containing 4

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008870, Guinea pig)

Protein Percentage 93.66%
CDS Percentage 91.45%
Ka/Ks Ratio 0.11939 (Ka = 0.0329, Ks = 0.2751)

TMTC4 ENSG00000125247 (Human)

Gene Details

transmembrane and tetratricopeptide repeat containing 4

External Links

Gene Match (Ensembl Protein ID: ENSP00000343871, Human)

Protein Percentage 93.12%
CDS Percentage 89.92%
Ka/Ks Ratio 0.10163 (Ka = 0.0364, Ks = 0.3586)

Tmtc4 ENSMUSG00000041594 (Mouse)

Gene Details

transmembrane and tetratricopeptide repeat containing 4

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000046368, Mouse)

Protein Percentage 91.35%
CDS Percentage 87.75%
Ka/Ks Ratio 0.11053 (Ka = 0.0478, Ks = 0.4328)

Tmtc4 ENSRNOG00000014310 (Rat)

Gene Details

transmembrane and tetratricopeptide repeat containing 4 (Tmtc4), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000019602, Rat)

Protein Percentage 91.76%
CDS Percentage 87.88%
Ka/Ks Ratio 0.10524 (Ka = 0.0461, Ks = 0.4385)

Genome Location

Sequence Coding sequence

Length: 2265 bp    Location: 10588073..10639833   Strand: +
Raw sequence   
>XM_004858591.1
ATGGCCGAGCTGGATGCCGATTTGGATGCCATCATCCCATCTTCTTTCCTTCCCCCCTTCTGGGCTAAGTTAGTAGTGGGATTTGTTTCCCTCCTGTGTTTCGCACGGAGCTATGATGGCGATTTTGTCTTTGATGACTCTGAAGCTATTGTTAACAATAAGGACCTCCACGCCGACACTCCCCTGGGAGACCTGTGGCATCACGACTTCTGGGGCAGTAGACTGAGCAGCAATACCAGCCACAAGTCCTACCGGCCGCTCACTGTCCTGACTTTCAGGATTAACTACTACTTGTCAGGAGGCTTCCACCCTGTGGGCTTCCACGTGGTCAACATCCTTCTGCACGGCGGCATCTCCGTGCTCATGGTGGATGTCTTCTCCGTGCTCTTCGGAGGCCTGCAGTTCACCAGCAAAGGCCGGAGGGTGCACCTGGCCCCCAGAGCATCCCTGCTGGCGGCTCTGCTGTTTGCTGTCCATCCTGTGCACACCGAGTGTGTTGCTGGTGTTGTCGGCCGCGCAGACCTCCTCTGTGCCCTGTTCTTTTCGTTATCTTTCCTTGGCTACTGTAAAGCATTTCGAGAAAGTAACAAGGAGGGAACGCAGTCTTCTACCTGCTGGGTGTTGCTGAGCATCTTTCTGGGAGCAGTGGCCATGCTGTGCAAAGAGCAAGGGATCACAGTGCTGGGTTTGAATGCGGTATTTGACATCTTGGTGATAGGCAAATTCAATGTTCTGGAAGTCGTCCAGAAGGTACTACGTAAGGACAAGTCATTAGAGAATTTGGGAGCACTCAGGAGCAGGGGCCTCCTCTTCCGAATGACCCTCCTCACCTCAGGCGGGGCCGGCATGCTCTACGCGCGCTGGAAAATCATGGGGACCGGCCCGCCAGCATTCACGGAGGTGGACAACCCGGCCTCCTTTGCCGACAGCGTGTTGGTGAGGGCCATAAACTATAATTACTACTATTCACTGAATGCCTGGCTGCTGCTGTGTCCCTGGTGGCTGTGTTTTGATTGGTCAATGGGCTGCATCCCCCTCATTAAGTCAGTTGGTGACTGGAGGGTAATTGCCCTGGCAGCACTCTGGCTCTGTCTAATTGGCCTAATATGCCAAGCCCTGTGCTCTGAGGACAGTCGCAAGAGAAGAATCCTTACTCTGGGCCTGGGATTTCTCGTGATCCCGTTTCTTCCTGCGAGTAACCTGTTCTTCCGAGTGGGCTTCGTGGTGGCGGAACGCGTCCTCTACCTCCCCAGTGCCGGCTACTGTGTCCTGCTGACTTTTGGCTTCGGGGCCCTCAGCAGACAAACTAAGAAAAAGAAACTCATCTCCGCCTGCGTCCTGGGCATCTTACTCATCAACGCGCTGAGGTGTGTGATTCGCAGCGGCGAGTGGAGGAGTGAAGACCAGCTTTTTAGAAGCGCCCTGTCTGTGTGTCCCCTCAATGCTAAGGTATACATACAGGACCTCATTTTCAAAACAGACCTGCTGGTTCACTACAACATTGGCAAAAACCTGGCTGATAAAGGCAACCAAACAGCAGCCATCCAATATTACCGGGAAGCAGTAAGATTAAATCCCAAGTATGTTCATGCCATGAATAATCTTGGAAATATCTTAAAAGAAAGGAATGAGCTCCAAGAAGCAGAAGAGCTGCTGTCTTTAGCTGTTCAAATACAGCCAGACTTTGCTGCTGCATGGATGAACCTGGGCATAGTGCAGAACAGCCTGAAACAGTTCGAGGCAGCAGAGCAGAGTTACCGGACAGCCATCAAACACAGAAGGAAGTACCCAGACTGCTACTACAACCTTGGGCGACTGTATGCAGATCTGAATCGCCATGTGGACGCTTTGAACGCATGGAGAAATGCTACCATGCTGAAGCCCGAGCACAGCCTGGCTTGGAACAACATGATCATCCTCCTGGACAACACAGGTAATTTAGCCCAAGCTGAAGCAGTTGGAAGAGAGGCACTGGAATTAATACCAAATGATCACTCTCTTATGTTCTCCTTGGCAAACGTGCTGGGGAAATCCCAGAAATACAAGGAATCTGAAGCTTTATTCCTCAAGGCAATTAAAGCAAATCCAAATGTTGCAAGTTACCATGGGAATTTAGCGGTGCTCTATCATCGCTGGGGACATCTCGACTTGGCCAAGAAACACTACGAAATCTCCCTGCAGCTCGACCCCGCGGCAGCAGGCACCAAGGAGAATTACGGTCTGCTAAGAAGAAAGCTGGAGCAGATGCGCAAGAGCAACGTCTGA

Related Sequences

XP_004858648.1 Protein

Tmtc4 PREDICTED: transmembrane and TPR repeat-containing protein 4 isoform X4 [Heterocephalus glaber]

Length: 754 aa      View alignments
>XP_004858648.1
MAELDADLDAIIPSSFLPPFWAKLVVGFVSLLCFARSYDGDFVFDDSEAIVNNKDLHADTPLGDLWHHDFWGSRLSSNTSHKSYRPLTVLTFRINYYLSGGFHPVGFHVVNILLHGGISVLMVDVFSVLFGGLQFTSKGRRVHLAPRASLLAALLFAVHPVHTECVAGVVGRADLLCALFFSLSFLGYCKAFRESNKEGTQSSTCWVLLSIFLGAVAMLCKEQGITVLGLNAVFDILVIGKFNVLEVVQKVLRKDKSLENLGALRSRGLLFRMTLLTSGGAGMLYARWKIMGTGPPAFTEVDNPASFADSVLVRAINYNYYYSLNAWLLLCPWWLCFDWSMGCIPLIKSVGDWRVIALAALWLCLIGLICQALCSEDSRKRRILTLGLGFLVIPFLPASNLFFRVGFVVAERVLYLPSAGYCVLLTFGFGALSRQTKKKKLISACVLGILLINALRCVIRSGEWRSEDQLFRSALSVCPLNAKVYIQDLIFKTDLLVHYNIGKNLADKGNQTAAIQYYREAVRLNPKYVHAMNNLGNILKERNELQEAEELLSLAVQIQPDFAAAWMNLGIVQNSLKQFEAAEQSYRTAIKHRRKYPDCYYNLGRLYADLNRHVDALNAWRNATMLKPEHSLAWNNMIILLDNTGNLAQAEAVGREALELIPNDHSLMFSLANVLGKSQKYKESEALFLKAIKANPNVASYHGNLAVLYHRWGHLDLAKKHYEISLQLDPAAAGTKENYGLLRRKLEQMRKSNV