Details from NCBI annotation

Gene Symbol Itgbl1
Gene Name integrin, beta-like 1 (with EGF-like repeat domains), transcript variant X2
Entrez Gene ID 101702594

Database interlinks

Part of NW_004624793.1 (Scaffold)

For more information consult the page for NW_004624793.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ITGBL1 ENSCPOG00000012010 (Guinea pig)

Gene Details

integrin, beta-like 1 (with EGF-like repeat domains)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000015204, Guinea pig)

Protein Percentage 94.74%
CDS Percentage 91.23%
Ka/Ks Ratio 0.06829 (Ka = 0.0244, Ks = 0.3578)

ITGBL1 ENSG00000198542 (Human)

Gene Details

integrin, beta-like 1 (with EGF-like repeat domains)

External Links

Gene Match (Ensembl Protein ID: ENSP00000365351, Human)

Protein Percentage 90.69%
CDS Percentage 88.39%
Ka/Ks Ratio 0.10618 (Ka = 0.0471, Ks = 0.4439)

Itgbl1 ENSMUSG00000032925 (Mouse)

Gene Details

integrin, beta-like 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000059019, Mouse)

Protein Percentage 88.66%
CDS Percentage 86.17%
Ka/Ks Ratio 0.10089 (Ka = 0.0585, Ks = 0.5794)

Itgbl1 ENSRNOG00000004516 (Rat)

Gene Details

integrin, beta-like 1 (Itgbl1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000006264, Rat)

Protein Percentage 89.27%
CDS Percentage 86.17%
Ka/Ks Ratio 0.09765 (Ka = 0.0566, Ks = 0.5799)

Genome Location

Sequence Coding sequence

Length: 1488 bp    Location: 9878648..9645096   Strand: -
>XM_004858584.1
ATGCGCCCCCCGGGCCTCGGGGGGCACCTGTGGCTGCTGCTGCCCCCGCTGCTCTTGGCCGGGCTGTCGGCCGCACCGCAGAGCTTCTCGCCCTCGCTGAGGAGCTGGTCGGGCGCCCCCTGCAGGCTGTCCCGGACGGAGTCTGAGCGCAGGTGCCTCGCACCCGGGCAGGCCCCTGGCAGCGCCCTGTGCCACGGCCGGGGCCGGTGCGACTGCGGCGTCTGCATCTGCCACGTGACCGAGCCGGGCACCTACTTCGGGCCCCTGTGCGAGTGCCACGAGTGGGTATGCGAGACGTACGACGGGGACACCTGCGCAGGCCATGGGACTTGTGACTGTGGGAAGTGCAAATGTGACCTGGGATGGTCTGGGGATGCTTGCCAGTACCCGACTAACTGTAACCTCACGAAGAAAAAAAGCAATCAAATGTGCAAGAATTCTCAAGATATCGTCTGCTCCAATGCAGGTACCTGTCACTGTGGCAGGTGTAAATGTGATGATTCAGATGGAAATGGACTTGTCTATGGTAAATTTTGTGAGTGTGATGATAGAGAATGTATAGATGATGAAACAGAAGAAATATGTGGAGGCCATGGGAAGTGTTACTGTGGAAACTGTTACTGTGAGGCTGGTTGGCATGGAGATAAATGCGAATTCCAGTGCGACATCACCCCCTGGGAAAGCAAGCAAAAATGCACGTCTCCAGATGGCAAAATCTGCAGTAACAGAGGGACTTGTGTGTGTGGTGAGTGTTCTTGCCATGATGTTGATCCGACCGGGGACTGGGGAGACATTCACGGGGACACCTGTGAATGTGATGAAAGAGACTGCAGCTCTGTTTATGACCGTTATTCTGATGACTTCTGCTCAGGTCACGGGCAGTGTAACTGTGGAAGATGTGACTGCAAAGCAGGCTGGTACGGGAAGACGTGTGAACACCCCCGTTCCTGCCCACTGTCCGCTGAGGAAAGCTTCAGGAAGTGTCAGGGCGGCTCAGCCCTGCCATGCTCGGGAAGGGGCAGATGTGAATGTGGAAAGTGCACTTGCTACCCACCGGGGGACCGCCGGGTGTACGGCAAGACCTGTGAGTGTGACAACCGCCACTGTGAGGACCTGGAAGGCGTGGTGTGTGGAGGTCACGGCACATGTTCTTGTGGTCGCTGTGTTTGTGAGCAAGGATGGTTTGGTGAGCTCTGCCAACATCCGCGGAAATGCAACATGACCGAAGAGCAAAGCAAGAGCCTGTGTGAATCAGCAGATGGCATATTGTGCTCGGGAAAGGGTTCTTGTCACTGTGGAAAGTGCATTTGTTCTGCCGAAGAGTGGTATATTTCCGGGGAATTCTGTGACTGTGATGACAGAGACTGCGACAAACACGATGGGCTCATTTGCACAGGGAATGGAATATGTAGCTGTGGAAACTGTGAATGCTGGGATGGATGGAATGGAAATGCATGTGAAATCTGGCTTGGCACCGAATATCCTTAA

Related Sequences

XP_004858641.1 Protein

Itgbl1 PREDICTED: integrin beta-like protein 1 isoform X2 [Heterocephalus glaber]

Length: 495 aa      View alignments
>XP_004858641.1
MRPPGLGGHLWLLLPPLLLAGLSAAPQSFSPSLRSWSGAPCRLSRTESERRCLAPGQAPGSALCHGRGRCDCGVCICHVTEPGTYFGPLCECHEWVCETYDGDTCAGHGTCDCGKCKCDLGWSGDACQYPTNCNLTKKKSNQMCKNSQDIVCSNAGTCHCGRCKCDDSDGNGLVYGKFCECDDRECIDDETEEICGGHGKCYCGNCYCEAGWHGDKCEFQCDITPWESKQKCTSPDGKICSNRGTCVCGECSCHDVDPTGDWGDIHGDTCECDERDCSSVYDRYSDDFCSGHGQCNCGRCDCKAGWYGKTCEHPRSCPLSAEESFRKCQGGSALPCSGRGRCECGKCTCYPPGDRRVYGKTCECDNRHCEDLEGVVCGGHGTCSCGRCVCEQGWFGELCQHPRKCNMTEEQSKSLCESADGILCSGKGSCHCGKCICSAEEWYISGEFCDCDDRDCDKHDGLICTGNGICSCGNCECWDGWNGNACEIWLGTEYP