Sequence details NCBI ID: XM_004858566.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Efnb2
Gene Name ephrin-B2, transcript variant X2
Entrez Gene ID 101723880

Database interlinks

Part of NW_004624793.1 (Scaffold)

For more information consult the page for NW_004624793.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

EFNB2 ENSCPOG00000003233 (Guinea pig)

Gene Details

ephrin-B2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002928, Guinea pig)

Protein Percentage 97.71%
CDS Percentage 95.04%
Ka/Ks Ratio 0.05541 (Ka = 0.0104, Ks = 0.1883)

EFNB2 ENSG00000125266 (Human)

Gene Details

ephrin-B2

External Links

Gene Match (Ensembl Protein ID: ENSP00000245323, Human)

Protein Percentage 95.03%
CDS Percentage 92.16%
Ka/Ks Ratio 0.06632 (Ka = 0.0234, Ks = 0.3525)

Efnb2 ENSMUSG00000001300 (Mouse)

Gene Details

ephrin B2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000001319, Mouse)

Protein Percentage 96.03%
CDS Percentage 90.95%
Ka/Ks Ratio 0.04334 (Ka = 0.0189, Ks = 0.4371)

Efnb2 ENSRNOG00000014648 (Rat)

Gene Details

ephrin B2 (Efnb2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000019675, Rat)

Protein Percentage 95.7%
CDS Percentage 91.06%
Ka/Ks Ratio 0.04347 (Ka = 0.0189, Ks = 0.4348)

Genome Location

Sequence Coding sequence

Length: 909 bp    Location: 5089692..5130048   Strand: +
Raw sequence   
>XM_004858566.1
ATGGGCGCGCGCAGGGACTCGGTGTGGAAGTACTGCTGGGGCGTGCTGATGGTTTTGTGCCGAACTGCGACCTCCAGGTCCCTAGTTTTAGAGCCTATCTATTGGAATTCCTCCAACTCCAAATTTCTACCTGGACAAGGACTGGTACTATACCCACAGATAGGAGACAAATTGGATATTATTTGCCCCAAAGTGGACTCTAAAACTGTTGGCCAATATGAATATTATAAAGTTTATATGGTTGATAAAGACCAAGCAGACAGATGCACTATTAAGAAGGAAAATACCCCACTGCTCAACTGTGCCCGTCCAGACCAGGATGTGAAATTTACTATCAAGTTCCAAGAGTTCAGCCCTAACCTCTGGGGTCTAGAATTTCAGAAGAACAAAGATTACTACATTATATATGCGAGTTCTGCTGGATCAACCAGGAATAGTGGTCCAACAAGACGTCCAGACCTAGAAGCTGGTACAAATGGAAGAAGTTCAACAACAAGTCCCTTTGTAAAACCAAATTCAGGTTCGAGCACAGACGGCAACAGCGCCGGACATTCGGGGAACAACCTCCTCGGTTCCGAAGTGGCCTTATTTGCAGGGATAGCGTCAGGATGCATCATCTTCATCGTCATCATCATCACGCTCGTGGTCCTGCTGCTCAAGTACCGCCGACGGCACCGCAAGCACTCGCCCCAGCACACGACCACGCTGTCTCTGAGCACCCTGGCCACGCCCAAGCGTGGCGGCAGCAACAACGGCTCGGAGCCCAGTGACATTATCATCCCGCTCAGGACTGCGGACAGCGTCTTCTGCCCGCACTACGAGAAGGTGAGCGGGGACTACGGGCACCCGGTGTACATAGTCCAGGAGATGCCCCCGCAGAGCCCCGCCAACATTTACTACAAGGTCTGA

Related Sequences

XP_004858623.1 Protein

Efnb2 PREDICTED: ephrin-B2 isoform X2 [Heterocephalus glaber]

Length: 302 aa      View alignments
>XP_004858623.1
MGARRDSVWKYCWGVLMVLCRTATSRSLVLEPIYWNSSNSKFLPGQGLVLYPQIGDKLDIICPKVDSKTVGQYEYYKVYMVDKDQADRCTIKKENTPLLNCARPDQDVKFTIKFQEFSPNLWGLEFQKNKDYYIIYASSAGSTRNSGPTRRPDLEAGTNGRSSTTSPFVKPNSGSSTDGNSAGHSGNNLLGSEVALFAGIASGCIIFIVIIITLVVLLLKYRRRHRKHSPQHTTTLSLSTLATPKRGGSNNGSEPSDIIIPLRTADSVFCPHYEKVSGDYGHPVYIVQEMPPQSPANIYYKV