Gene Symbol | Col4a1 |
---|---|
Gene Name | collagen, type IV, alpha 1 |
Entrez Gene ID | 101718501 |
For more information consult the page for NW_004624793.1 (Scaffold)
The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.
Protein Percentage | 91.37% |
---|---|
CDS Percentage | 87.83% |
Ka/Ks Ratio | 0.15213 (Ka = 0.0523, Ks = 0.3438) |
collagen, type IV, alpha 1
Protein Percentage | 89.69% |
---|---|
CDS Percentage | 82.54% |
Ka/Ks Ratio | 0.09488 (Ka = 0.0678, Ks = 0.715) |
collagen, type IV, alpha 1
Protein Percentage | 90.23% |
---|---|
CDS Percentage | 82.2% |
Ka/Ks Ratio | 0.08464 (Ka = 0.064, Ks = 0.7557) |
collagen, type IV, alpha 1 (Col4a1), mRNA
Protein Percentage | 89.87% |
---|---|
CDS Percentage | 82.46% |
Ka/Ks Ratio | 0.09246 (Ka = 0.0663, Ks = 0.7172) |
>XM_004858556.1 ATGGGGCCCCGGCTCGGCCTCTGGCTGCTGCTGCTGCCCGCCGCCCTTCTGCTCCACGAGGAGCGCGGGCGGGCCGCCGCCAAGGGTGGGTGTGATGGTGCTGGTGGTTGTGGAAAATGTGACTGCCACGGAGTGAAAGGACAAAAGGGAGAGAGAGGCCTCCCGGGCCTGCAAGGTGTCATTGGGTTTCCGGGAATGCAAGGACCCGAGGGGCCGCACGGACCCCCAGGACTGAAGGGCGACGCTGGAGAACCTGGGCTTCCTGGCACGAAAGGGACACGTGGGCCACCTGGAGCATCCGGTTACCCTGGAAACCCAGGACTTCCGGGTATCCCTGGCCAGGATGGTCCCCCGGGGCCCCAAGGCATCCCGGGATGCAACGGTACAAAGGGTGAGAGAGGACCTTCCGGGCCACCGGGCTTGCCTGGGTTCGCTGGAAATCCCGGACCGCCGGGGCCCCCAGGAATGAAGGGGGACCCGGGTGAAATACTCCGCCACGTGCCTGGAACGCTGCTGAAAGGAGAGCGTGGATTCCCGGGAGCCCCGGGGACGCCCGGCTCTCCAGGACTGCCAGGGCTCCAGGGACCCGTGGGCCCCCCCGGATTTACCGGACCGCCAGGTCCCCCAGGCCCTCCCGGTCCCCCAGGTGAAAAGGGGCAGATGGGCTCGAGTTTTCAGGGGCCGAAAGGTGACAAGGGTGACCAGGGCGTCAGCGGGCCTCCCGGAGTGCCTGGCCAGGCACAGGTGAAGCAGAAGGGGGACTTCATCCCGACAGGGGAGAAGGGTCAGAAAGGTGAACCCGGCTTTCAGGGAATGCCAGGGGTTGGAGAGAAAGGCGAACCAGGAAAGCCCGGGCCTCGGGGAAAACCTGGAAAAGATGGTGAAAGGGGAGAGAGGGGGAGTCCGGGCCTCCCTGGCGACTCGGGGTACCCAGGGCTCCCGGGCCGGCTGGGCCCCAAGGGAGACAAAGGCGAAGCTGGTCCTCCAGGCGCCCCGGGAATTGTCATAGGCACCGGACCTCTGGGAGAAAAGGGAGACCGAGGCTACCCAGGCTCTCCTGGGCTGAGAGGGGAGCCAGGCCCCAAAGGTTACCCTGGAATTCCAGGCCAGCCAGGCCCTCCAGGCCTTCCCACCCCAGGGCAGCCTGGTTCTCCCGGCTTCCCCGGTGTAAGAGGAGAAAAAGGCGACCAAGGACCCCCAGGCGCATCTCTGCCCGGACCCAGTGGAAGGGACGGGGTCCCCGGACCCCCTGGCCTCCCCGGACCCCCTGGGCAGCCAGGCCACACCAACGGCATCGTGGAGTGTCAGCCCGGACCGCCAGGCGACCAGGGTCCACCCGGGACTCCCGGACAGCCGGGATTTTCGGGCGAAGCTGGAGAAAAAGGCCAGAAAGGAGACAGCTGCCTCATCTGCGACATGGAAGGACTCCGAGGGCCCCCCGGGCCACAGGGGCCCCCAGGAGAGATCGGTTTCCCAGGACAGCCAGGGGCCAAAGGTGACAGAGGCCTGCCAGGCAGGGATGGCCTCGAAGGGGTGCCTGGTCCACAAGGTACCCCGGGGCTGATGGGCCAGCCAGGAGCTAAGGGAGAGCCTGGCGAGATCATCTTCGATGCGCGGCTGAAAGGTGACAAAGGAGACCCAGGTTTTCCAGGACAGCCCGGTGTGCCCGGAAGAGCAGGATCCCCCGGAAGAGATGGCCACCCAGGACTTCCCGGCCCCAAAGGCTCCCCGGGCTCAGTAGGACTCAAGGGAGAACGTGGCCCCCCTGGAGGAGCTGGCTTCCCTGGCAACCGTGGTGACATCGGCCCGCCTGGGCCTCCGGGATTTGGTCCGACTGGCCCCATCGGTGTAAAAGGACAAGCAGGCTTTCCCGGGAGCCCTGGAGTCCCAGGCCTGCCAGGTCCAAAAGGCGAAGCGGGAAGGGCTGTTCCCTTACCTGGCCCCCCTGGAGCGGATGGGCTCCCAGGGTCCCCCGGATTCCCCGGACCCCAAGGTGACCGAGGCTTCCCTGGGACCCCAGGCCGGCCAGGCCTCCCTGGGGAGAAGGGCGCTGTGGGCCAGCCAGGGATTGGATTTCCTGGGCCTCCGGGCCCCAAAGGTGTGGATGGCTTACCCGGAGACGTGGGACCTCCCGGAAGCCCAGGCCGCCCGGGATTTAACGGCTTGCCTGGCAGCCCAGGTGTACCCGGCCAGAAGGGAGAGCCTGGAGTAGGTCTCCCTGGGCTTAAAGGACTGCCCGGCCTTCCTGGCATCCCTGGCACCCCTGGAGAGAAGGGCAGCATCGGGGGACCAGGCATCCCTGGGGAACACGGAGCGCTTGGCCCCCCTGGGCTTCAGGGCATCAGAGGTGACCCCGGACCTCCTGGAGCACAGGGCCCCGCAGGCCCACCGGGGCCACCGGGCCTCGGTCCCCCTGGAGCCATGGGACCCCCCGGAGGACAGGGCCTACCAGGGTCGTCAGGCCCTCCTGGACTGAAAGGAGAGAAGGGATTCCCCGGGTTCCCAGGACTGGACATGCCCGGCCCTAAAGGAGACAAAGGGACCCAAGGACTTCCTGGCCTCACAGGACAATCGGGGCTGCCTGGCCTTCCTGGACAGCAGGGCACACCTGGAATTCCGGGGTTCCCAGGTCTCAAGGGAGAGATGGGCATCATGGGCGCCCCGGGGCAGCCGGGCTTGCCAGGACCACTGGGCACCCCGGGATTGCCTGGTGAAAAAGGGGACCACGGCTTCCCGGGCTCCTCGGGACCCAGGGGAGACCCTGGCTTGAAAGGTGAAAAAGGGGATGCCGGGCTCCCTGGCAAGCCGGGGACCATGGATAAACTGGACATGGGCAGCGTGAAGGGAGAGAAGGGAGACCAAGGAGAGAAAGGACAAATTGGACCCACTGGTGACAAAGGATCCCGAGGTGACCCTGGAACCCCAGGAGTGCCCGGCAAAGATGGGCAGGCGGGGTACCCGGGACAGCCAGGACCCAAGGGCGACCCAGGTATAAGCGGCACGCCGGGTGCTCCCGGGCTGCCTGGACCCAAAGGATCGGTTGGTGGCATGGGCCTGCCAGGGACACCTGGAGAAAAGGGCGCGCCGGGCATCCCTGGCCTGCAGGGCCTCCCCGGCTCGCCTGGACTGAAAGGGGCAAAGGGAGAGAAGGGACAGGCAGGCCTGCCTGGCATCGGAATTCCTGGGCGACCCGGAGACAAGGGAGACCAGGGGCTGGCAGGCTTCCCTGGCAGCCCTGGAGAGAAGGGAGAGAAAGGCAGTGCCGGGATGCCCGGTGTGCCGGGGTCTCCGGGCCCCAAAGGGTCTCCAGGCAGCGTCGGCTACCCAGGAAGCCCGGGTTTGCCCGGGGAGAAGGGTGATAAGGGCCTTCCGGGACTGAGCGGCATCCCCGGAGTCAAAGGAGAAGCAGGTCTCCCCGGGACACCTGGCCTCTCGGGCCCAGCTGGCCAGAAGGGCGAGCCCGGCAGCGACGGCATCCCGGGATCAGCAGGGGAGAAGGGCGAGCCAGGTCTCCCCGGACGAGGTTTCCCAGGGTTCCCAGGGGCCAAAGGAGACAAAGGTTCAAAGGGTGAAGTGGGCGTCCCCGGCCTGGCCGGGAGCCCCGGATTTCCTGGATCCAAAGGCGAGCAAGGGTTGATGGGTCCTCCAGGGCCCCAAGGACAGCCCGGCATACCTGGTGCTCCTGGCCACGCCGTGGAGGGTCCCAAAGGAGACCGGGGACCACAGGGACAACCTGGCCTGCCGGGGCTTCCGGGACCCATGGGGCCTCCAGGGCTGCCTGGGCTGGACGGACTGAAAGGAGAAAAGGGGAACCCAGGCTGGCCGGGGGCGCCTGGCGTCCCAGGGCCCAAGGGAGACCTGGGGTTCCAGGGCCTGCCGGGTATTGGCGGCTCTCCGGGAATCGCAGGCTCTAAGGGCGACATGGGGCCCCCAGGAGTTCCCGGATTCCATGGTCAGAAAGGTCTTCCTGGTATCCAGGGATTGAAAGGCGATCAGGGCGATCAAGGCCTTCCCGGTCCTAAAGGTCTTCAAGGTCCCCCCGGCCCTCCAGGTCCCTATGATGTCATCAAAGGCGATCCAGGCGTTCCTGGTCCTGAGGGTCCCCAAGGTCTGAAAGGGCTCCAGGGACCCCCAGGACCCAAAGGGCAGCAAGGTGTGACCGGCTCTGCAGGTGTCCCTGGACCTCAAGGAAACCCAGGCTATGATGGCGCCCCTGGCCAGAAAGGAGAGACGGGTCCCTTCGGGCCTCCTGGGCCCAGAGGATTCCCCGGCCCCCCAGGGCCTGATGGGCTGCCAGGATCCATGGGGCCCCCCGGCACCCCATCCGTTGACCATGGCTTCCTGCTGACCAGGCACAGCCAGACGACCGAGGACCCGCTGTGTCCGCCAGGGACCAAGATCCTTTACCACGGCTACTCTCTGCTCTACGTGCAGGGCAACGAGCGGGCCCACGGCCAGGACCTGGGCACGGCTGGCAGCTGCCTGCGCAAGTTCAGCACCATGCCCTTCCTGTTCTGCAACATCAACAACGTCTGCAACTTCGCCTCCCGCAACGACTACTCCTACTGGCTGTCCACGCCCGAGCCCATGCCCATGAGCATGGCACCCATCTCCGGGGACAACATCCGGCCCTTCATCAGCAGGTGCTCCGTGTGTGAGGCGCCCGCCATGGTGATGGCCGTGCACAGCCAGACTATCCAGATCCCGCAGTGCCCCAGCGGGTGGTCCTCACTCTGGATCGGCTACTCCTTCGTGATGCACACCAGCGCGGGTGCCGAGGGCTCCGGCCAAGCCCTGGCGTCGCCCGGGTCCTGCCTGGAGGAGTTCAGAAGCGCACCCTTCATTGAGTGCCACGGCCGCGGGACCTGCAATTACTACGCCAATGCTTATAGCTTCTGGCTGGCCACCATTGAGAGGAACGAGATGTTCAAGAAGCCCACACCCTCCACCTTGAAGGCCGGAGAGCTTCGCACCCACGTCAGCCGCTGCCAAGTGTGCATGCGAAGAACATAA
Col4a1 PREDICTED: collagen alpha-1(IV) chain [Heterocephalus glaber]
Length: 1670 aa View alignments>XP_004858613.1 MGPRLGLWLLLLPAALLLHEERGRAAAKGGCDGAGGCGKCDCHGVKGQKGERGLPGLQGVIGFPGMQGPEGPHGPPGLKGDAGEPGLPGTKGTRGPPGASGYPGNPGLPGIPGQDGPPGPQGIPGCNGTKGERGPSGPPGLPGFAGNPGPPGPPGMKGDPGEILRHVPGTLLKGERGFPGAPGTPGSPGLPGLQGPVGPPGFTGPPGPPGPPGPPGEKGQMGSSFQGPKGDKGDQGVSGPPGVPGQAQVKQKGDFIPTGEKGQKGEPGFQGMPGVGEKGEPGKPGPRGKPGKDGERGERGSPGLPGDSGYPGLPGRLGPKGDKGEAGPPGAPGIVIGTGPLGEKGDRGYPGSPGLRGEPGPKGYPGIPGQPGPPGLPTPGQPGSPGFPGVRGEKGDQGPPGASLPGPSGRDGVPGPPGLPGPPGQPGHTNGIVECQPGPPGDQGPPGTPGQPGFSGEAGEKGQKGDSCLICDMEGLRGPPGPQGPPGEIGFPGQPGAKGDRGLPGRDGLEGVPGPQGTPGLMGQPGAKGEPGEIIFDARLKGDKGDPGFPGQPGVPGRAGSPGRDGHPGLPGPKGSPGSVGLKGERGPPGGAGFPGNRGDIGPPGPPGFGPTGPIGVKGQAGFPGSPGVPGLPGPKGEAGRAVPLPGPPGADGLPGSPGFPGPQGDRGFPGTPGRPGLPGEKGAVGQPGIGFPGPPGPKGVDGLPGDVGPPGSPGRPGFNGLPGSPGVPGQKGEPGVGLPGLKGLPGLPGIPGTPGEKGSIGGPGIPGEHGALGPPGLQGIRGDPGPPGAQGPAGPPGPPGLGPPGAMGPPGGQGLPGSSGPPGLKGEKGFPGFPGLDMPGPKGDKGTQGLPGLTGQSGLPGLPGQQGTPGIPGFPGLKGEMGIMGAPGQPGLPGPLGTPGLPGEKGDHGFPGSSGPRGDPGLKGEKGDAGLPGKPGTMDKLDMGSVKGEKGDQGEKGQIGPTGDKGSRGDPGTPGVPGKDGQAGYPGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGLPGTPGEKGAPGIPGLQGLPGSPGLKGAKGEKGQAGLPGIGIPGRPGDKGDQGLAGFPGSPGEKGEKGSAGMPGVPGSPGPKGSPGSVGYPGSPGLPGEKGDKGLPGLSGIPGVKGEAGLPGTPGLSGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGFPGAKGDKGSKGEVGVPGLAGSPGFPGSKGEQGLMGPPGPQGQPGIPGAPGHAVEGPKGDRGPQGQPGLPGLPGPMGPPGLPGLDGLKGEKGNPGWPGAPGVPGPKGDLGFQGLPGIGGSPGIAGSKGDMGPPGVPGFHGQKGLPGIQGLKGDQGDQGLPGPKGLQGPPGPPGPYDVIKGDPGVPGPEGPQGLKGLQGPPGPKGQQGVTGSAGVPGPQGNPGYDGAPGQKGETGPFGPPGPRGFPGPPGPDGLPGSMGPPGTPSVDHGFLLTRHSQTTEDPLCPPGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTMPFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPISGDNIRPFISRCSVCEAPAMVMAVHSQTIQIPQCPSGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRGTCNYYANAYSFWLATIERNEMFKKPTPSTLKAGELRTHVSRCQVCMRRT