Details from NCBI annotation

Gene Symbol Lamp1
Gene Name lysosomal-associated membrane protein 1, transcript variant X2
Entrez Gene ID 101702697

Database interlinks

Part of NW_004624793.1 (Scaffold)

For more information consult the page for NW_004624793.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LAMP1 ENSCPOG00000021441 (Guinea pig)

Gene Details

lysosomal-associated membrane protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000015749, Guinea pig)

Protein Percentage 74.94%
CDS Percentage 79.71%
Ka/Ks Ratio 0.224 (Ka = 0.1541, Ks = 0.6877)

LAMP1 ENSG00000185896 (Human)

Gene Details

lysosomal-associated membrane protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000333298, Human)

Protein Percentage 66.99%
CDS Percentage 72.17%
Ka/Ks Ratio 0.17497 (Ka = 0.2204, Ks = 1.2598)

Lamp1 ENSMUSG00000031447 (Mouse)

Gene Details

lysosomal-associated membrane protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000033824, Mouse)

Protein Percentage 63.61%
CDS Percentage 70.71%
Ka/Ks Ratio 0.22813 (Ka = 0.2545, Ks = 1.1154)

Lamp1 ENSRNOG00000019629 (Rat)

Gene Details

lysosomal-associated membrane protein 1 (Lamp1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000026580, Rat)

Protein Percentage 61.98%
CDS Percentage 70.86%
Ka/Ks Ratio 0.25447 (Ka = 0.2674, Ks = 1.0507)

Genome Location

Sequence Coding sequence

Length: 1485 bp    Location: 675675..661320   Strand: -
>XM_004858503.1
ATGGGGCGCCGGGAGATCTCCGCACTCCTGCGCGACCTCTCGCGAGACCTCCGATCACGTGATGCGGGCGCGGCGGCTCACGTGACGGGTGCTACCGGCCGCGGGGTCTCGTCGGTGCCGGCGCTCTGCATCCGGGCCTGTCGCGTCGCTCGACGGGGCACTCGCCGTCCCTACCCGGCCGTTCCAGCCTCGCGCCCCTGCCGTCCTTGCTCGCCGGTCTGTGCCTCGGCGTCTCGCGCTATGGCTGCTTCTCGAGGCGCCCGGCGGCCGCTGCTGCTGCTCCTGCTCGGATTATTGAGCCTCACGTGTGGAGCCTCGGCGGTGTTCGAGGTGAAAGACGGCAATGGGACAATGTGTATAAAGGCCAACTTCTCTGCTGCCTTCCAGACGAGCTATGAGACTGGGAACGGGCCTCAGAATGCGACCTTTCACCTGCCATCCTCCGCACACGTACTCAGTAACAGCTCATGCGGTGGAGTCAACGCCTCCCAGCCCAGCCTGGCCATCGGCTTTGGAGGACATTCGCTGACCCTGGAATTCACACGGAACACCACCCGCTACCTCGTCCAGCTCCTGCGCTTCTCCTATGATCTGGCGGACACAGATGTCTTCCCCAACGCAAGCTTCAAGGGAGTCAAGACTGAGGCTTCCACAACTGACATTCAGGCAGACATAGACAGAAAGTACCACTGCACCAGCGCCATCCAGGTGCACATGAGGAATGTGACTGTGACACTCTCTGACACCACCATCCAGGCCTACCTGACCAACGGCAGCTTCAGCAAGGCAGAGACGCGCTGCAAGCAGGACCTGGCCCCCCCGACCTCCGCGCCCCCTACACCGCCCAAGCCCCCCGCACCGCCGAGCCCTGCACCGCCCAGCCCCTCCGTGTACACGTACAACGTGAATGGCAGCAACGGGACCTGCCTGCTGGCCAGGATGGCGCTGCAGCTGAACATCTCCTATGCACGGAAGGACAACACGACCGTGACCAGAGTGGTCAACATCAAGCCCGGTACGACTGCGGAGGGGAGCTGTGGTGCCGACCTGGTGTCCCTGGAGATACACAGTGAGAACATCGTGGTCCTGGGCTTGCACTTCCGAATGAATTCGAGTGCCAGCCGCTTCTTCCTGGAAACAGTCGAGTTGAACATGACTGTCCCTGATGCCCCAGGGCCCACTGTCCAGGCAGCCAATAACTCGCTGAGAGCCCTGCAGGCCACCATCGGGAGCTCCTACAGGTGCACCACCGAGGAACGCCTGCGTATCACACCCTCCTTCTTCCTCAACCTCTTCAGCGTGCAGGTCCAGGCTTTCAAGGTCGAAGGGAACAGGTTCGGGTCTGCCGAGGAGTGTCTGCTGGACGGGAGCGGCATGCTGATCCCCATCGCCGTGGGCGGCGCCCTGGCGGGGCTCGTGCTCATCGTGCTCATCGCCTACCTCATCGGCAGGAAGAGGAGTCACGCCGGCTACCAGACCATCTAG

Related Sequences

XP_004858560.1 Protein

Lamp1 PREDICTED: lysosome-associated membrane glycoprotein 1 isoform X2 [Heterocephalus glaber]

Length: 494 aa      View alignments
>XP_004858560.1
MGRREISALLRDLSRDLRSRDAGAAAHVTGATGRGVSSVPALCIRACRVARRGTRRPYPAVPASRPCRPCSPVCASASRAMAASRGARRPLLLLLLGLLSLTCGASAVFEVKDGNGTMCIKANFSAAFQTSYETGNGPQNATFHLPSSAHVLSNSSCGGVNASQPSLAIGFGGHSLTLEFTRNTTRYLVQLLRFSYDLADTDVFPNASFKGVKTEASTTDIQADIDRKYHCTSAIQVHMRNVTVTLSDTTIQAYLTNGSFSKAETRCKQDLAPPTSAPPTPPKPPAPPSPAPPSPSVYTYNVNGSNGTCLLARMALQLNISYARKDNTTVTRVVNIKPGTTAEGSCGADLVSLEIHSENIVVLGLHFRMNSSASRFFLETVELNMTVPDAPGPTVQAANNSLRALQATIGSSYRCTTEERLRITPSFFLNLFSVQVQAFKVEGNRFGSAEECLLDGSGMLIPIAVGGALAGLVLIVLIAYLIGRKRSHAGYQTI