Details from NCBI annotation

Gene Symbol Champ1
Gene Name chromosome alignment maintaining phosphoprotein 1, transcript variant X4
Entrez Gene ID 101722945

Database interlinks

Part of NW_004624793.1 (Scaffold)

For more information consult the page for NW_004624793.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CHAMP1 ENSCPOG00000014363 (Guinea pig)

Gene Details

chromosome alignment maintaining phosphoprotein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000018130, Guinea pig)

Protein Percentage 90.51%
CDS Percentage 92.24%
Ka/Ks Ratio 0.28997 (Ka = 0.0504, Ks = 0.174)

CHAMP1 ENSG00000198824 (Human)

Gene Details

chromosome alignment maintaining phosphoprotein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000354730, Human)

Protein Percentage 85.13%
CDS Percentage 85.46%
Ka/Ks Ratio 0.1927 (Ka = 0.0862, Ks = 0.4473)

Champ1 ENSMUSG00000047710 (Mouse)

Gene Details

chromosome alignment maintaining phosphoprotein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000057270, Mouse)

Protein Percentage 76.32%
CDS Percentage 78.61%
Ka/Ks Ratio 0.22312 (Ka = 0.1501, Ks = 0.673)

Champ1 ENSRNOG00000000112 (Rat)

Gene Details

chromosome alignment maintaining phosphoprotein 1 (Champ1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000000124, Rat)

Protein Percentage 78.04%
CDS Percentage 79.67%
Ka/Ks Ratio 0.21138 (Ka = 0.1371, Ks = 0.6485)

Genome Location

Sequence Coding sequence

Length: 2427 bp    Location: 116497..109854   Strand: -
>XM_004858475.1
ATGGAAGTATTCCAGGAGCTGCGTCAGCCTCCCACACGTCTGGAGTGTGAGCACTGCACTTTCAGAGGCACAGATTATGAAAATGTGCAGATCCACGTAGGCACCGTCCATCCGGAACTCTGTGATGACATGGATGCTGGGGGGTTAGGGAAAATGATATTTTACCAGAAAAGCGCAAAGCTTTTTCACTGCCATAAATGCTTTTTTACCAGCAAGATGTACTCCAACGTGTACTATCATATCACATCCAAACATGCAGCCCCAGAGAAGTGGAACGATAGACCAAAAAACCAGTTGAGCAAAGAAATTGAGCCTGTGAACAGCCCTTCTGTTCCTGAACATCAGAAAACACCCTGTAACTCAGCAGATCTGAAGTCTGCACCTCTTCTTTCTGCAGAAACTCAAAAACTTGGTCCAGTTCTTTCTCCAGAGTCTCCAACACCTGCTCTTTTTACTCCCATGGAACTTGAGAAAACTGGCCCTGTTGTTTCTCCTGAGCCCCAGGCACCTCTTCCTCTTGAGCCTTTGAAATCTGCTCCTGTTTCTTCTCCTGAACTTTCAAAACCAGCCCCTTTTGCTTCTGAATCACAGAAGCCTGTTCCTTCTCCAGAGCCACAGAAACCTGCCCCTGTATCTCCTGAACCAGTGAAAGCTGGTCTTCCTAACCCCAAGCCTCAGAAGCACTCTCATTTCACAGAGACAGGAGGGGCTCCTTCGGCCTCATCTCCAGAGTCACCGGTTCTGTCTCCTTCCCCTGACCCTTGGGGGCCATCCCCAACTGCATCTCCAGAATCTCGGAAGCCAGCCCAGACTGCCTCCCCTGAGCCAAGGAAGCTGTCCCCATCAGAATCGCCTGAACCTTGGAAGCCATTCCCTGCTGTCTCCCCAGAGCCCCGGAGACCAGCCCCAGCTGTGTCGCCAGGTTCCTGGAAGCCAGGCCCACCTGGATCCCCAAGGCCTTGGAAATCGAGTCCTTCTGCATCATCAGGTCCATGGAAGCCAACTAAACCTGCTCCATCCGTGTCTCCTGGACCCTGGAAGCCAATTCCTTCTCTATCACCTGGACCCTGGAAACCAGCTTCATCTGTATCCCCTGCATCCTGGAAGTCATCTTCAGTCTCACCAGGTTCCTGGAAAACTCCACCCACATCTCCAGAGTCATGGAAGTCTGGCCCACCTGAGCTTCGAAAGACAACTCCTACCCTGTCACCAGAACATTGGAAAGCAGTTCCCCCAGTATCTCCTGAGATTCGCAAACCGGGCCCACCACTCTCCCCAGAGCTCCGCAGCCCAGCCGGCTCTCCGGAGCTCAGGAAGCCCTCAGGGTCGCCAGACCTTTGGAAGCTTTCTCCTGATCATCGGAAAACTTCTCCTGCCTCCCTGGATTTTTCTGAGTCTCAGAAAAGTTCCCGTGGTGGTTCTCCTGATCTCTGGAAGTCTTCCTTCATCATGGAATCTCAGAAACCCACTGTCTTCCCTGACACCTGGAAATCAGGTCCATCAGAGTCTCCCAAATTGGCCTCAGATATCTGGAAACCTGTTCCCTCCATTGATGCTGAGCCTAGAAAATCCATGCTGTTTCCTGAGCCCACCAAAACCGCCCCTCCTGCTTCTCCTGAGCCACGGAAACGTGTGCTTTTCCCAGAGGCCCGGAAGCATCCTCTTTTTTCTGAGTTCCCCAAATCTGCTGTGTTCTCAGAGTCTCAGAAGATAGCTGAGCTTGGTGATGAGCTACAGACAGATGCCGTACGTGACCCAAAGTGTGATATTTTGGTTCAAGAAGAGCTTCTGGTGACACCGAAAAAAATTTTAGAAGATGCCTTGTTTCCCTCCTCCAAGAAACTCAAGAAGGACAGCCAGGAGCACTCAGATGCCGAGCTGAGCAGCAGTGAGTACATCAGAACAGATTTGGATGCCACAGACATGAAGGGCCAAGAGTCAAGCAGTGACCAAGAGCAGGTAGATGTAGACTCTGTTGATTTTGGCAAAGAGAACAAAATGGACATGCACAGTCCAGAGCAGTCCCGACATGTGCTGCAGTTCACTGAAGAAAAAGAAGCATTTATCTCTGAAGAGGAGATTGCAAAATACATGAAGCGTGGAAAAGGAAAGTATTACTGCAAAATTTGTTGCTGTCGTGCTATGAAGAAAGGTGCTGTTTTGCATCATTTGGTTAATAAGCATAATGTCCACAGCCCTTACAAGTGCACAATTTGTGGAAAGGCATTTCTTTTAGAATCTCTCCTTAAAAATCATGTAGCAGCCCATGGGCAAAGTTTACTTAAATGTCCACGCTGTAATTTTGAGTCAAATTTCCCAAGAGGCTTCAAGAAACATTTAACTCATTGTCAAAGCCGGCATAACGAAGAGGCAAATAAAAAGCTGATGGAAGCTTTTGAATCACCCCTGGAGGAGCAGCAGATTTGA

Related Sequences

XP_004858532.1 Protein

Champ1 PREDICTED: chromosome alignment-maintaining phosphoprotein 1 isoform X4 [Heterocephalus glaber]

Length: 808 aa      View alignments
>XP_004858532.1
MEVFQELRQPPTRLECEHCTFRGTDYENVQIHVGTVHPELCDDMDAGGLGKMIFYQKSAKLFHCHKCFFTSKMYSNVYYHITSKHAAPEKWNDRPKNQLSKEIEPVNSPSVPEHQKTPCNSADLKSAPLLSAETQKLGPVLSPESPTPALFTPMELEKTGPVVSPEPQAPLPLEPLKSAPVSSPELSKPAPFASESQKPVPSPEPQKPAPVSPEPVKAGLPNPKPQKHSHFTETGGAPSASSPESPVLSPSPDPWGPSPTASPESRKPAQTASPEPRKLSPSESPEPWKPFPAVSPEPRRPAPAVSPGSWKPGPPGSPRPWKSSPSASSGPWKPTKPAPSVSPGPWKPIPSLSPGPWKPASSVSPASWKSSSVSPGSWKTPPTSPESWKSGPPELRKTTPTLSPEHWKAVPPVSPEIRKPGPPLSPELRSPAGSPELRKPSGSPDLWKLSPDHRKTSPASLDFSESQKSSRGGSPDLWKSSFIMESQKPTVFPDTWKSGPSESPKLASDIWKPVPSIDAEPRKSMLFPEPTKTAPPASPEPRKRVLFPEARKHPLFSEFPKSAVFSESQKIAELGDELQTDAVRDPKCDILVQEELLVTPKKILEDALFPSSKKLKKDSQEHSDAELSSSEYIRTDLDATDMKGQESSSDQEQVDVDSVDFGKENKMDMHSPEQSRHVLQFTEEKEAFISEEEIAKYMKRGKGKYYCKICCCRAMKKGAVLHHLVNKHNVHSPYKCTICGKAFLLESLLKNHVAAHGQSLLKCPRCNFESNFPRGFKKHLTHCQSRHNEEANKKLMEAFESPLEEQQI