Details from NCBI annotation

Gene Symbol Vps4b
Gene Name vacuolar protein sorting 4 homolog B (S. cerevisiae)
Entrez Gene ID 101702359

Database interlinks

Part of NW_004624792.1 (Scaffold)

For more information consult the page for NW_004624792.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

VPS4B ENSCPOG00000014419 (Guinea pig)

Gene Details

vacuolar protein sorting 4 homolog B (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000019995, Guinea pig)

Protein Percentage 96.4%
CDS Percentage 94.29%
Ka/Ks Ratio 0.10176 (Ka = 0.0205, Ks = 0.2012)

VPS4B ENSG00000119541 (Human)

Gene Details

vacuolar protein sorting 4 homolog B (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSP00000238497, Human)

Protein Percentage 96.85%
CDS Percentage 92.79%
Ka/Ks Ratio 0.0513 (Ka = 0.0155, Ks = 0.3023)

Vps4b ENSMUSG00000009907 (Mouse)

Gene Details

vacuolar protein sorting 4b (yeast)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000092230, Mouse)

Protein Percentage 95.27%
CDS Percentage 89.34%
Ka/Ks Ratio 0.04608 (Ka = 0.0239, Ks = 0.5176)

Vps4b ENSRNOG00000002705 (Rat)

Gene Details

vacuolar protein sorting 4 homolog B (S. cerevisiae) (Vps4b), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000003715, Rat)

Protein Percentage 95.05%
CDS Percentage 88.14%
Ka/Ks Ratio 0.04189 (Ka = 0.0252, Ks = 0.6006)

Genome Location

Sequence Coding sequence

Length: 1335 bp    Location: 9128704..9098291   Strand: -
>XM_004858448.1
ATGGCATCCACTGGGTCCAATCTCCAGAAAGCAATAGATCTTGCTAACAAAGCAGCACAAGAAGACAAAGCTGGGAATTATGAGGAAGCCCTTCAACTCTATCAACATGCTGTACAATATTTTCTTCATGTAGTTAAATATGAAGCACAGGGTGATAAAGCCAAGCAAAGTATCAGGGCAAAGTGTACAGAATATCTTGATAGAGCAGAAAAACTAAAGGAGTATCTGAAGAAAAGAGAGAAAACCCCACAGAAGCCAGTGAAAGAGGGACAGCCAAGTCCAGCTGATGAGAAGGGGAATGACAGTGATGGGGAAGGAGAATCTGATGATCCTGAAAAAAAGAAACTACAGAATCAACTTCAAGGTGCCATCGTTATTGAGAGACCAAATGTGAAATGGAGCGACGTTGCTGGTCTTGAAGGAGCCAAAGAAGCACTTAAAGAGGCTGTGATTTTGCCCATTAAATTTCCCCATCTTTTTACAGGCAAGAGGACACCTTGGAGAGGAATCCTATTATTTGGGCCACCTGGAACAGGAAAATCCTATTTAGCCAAAGCTGTAGCAACAGAAGCAAACAACTCAACATTTTTTTCAATATCTTCCTCTGACCTTGTTTCTAAGTGGCTAGGTGAAAGTGAAAAACTGGTTAAGAATTTATTTCAGCTTGCCAGGGAGAACAAGCCTTCCATTATCTTCATTGATGAAATTGATTCTCTCTGTGGTTCAAGAAGTGAAAATGAAAGTGAAGCTGCACGTAGAATTAAGACAGAGTTTCTTGTGCAAATGCAAGGGGTTGGTGTGGACAATGATGGAATTTTGGTTCTGGGAGCTACAAACATACCCTGGGTTCTGGATTCTGCCATTAGGCGGAGATTTGAGAAACGAATCTACATTCCTTTGCCAGAAGCCCATGCCCGAGCAGCAATGTTTAAATTGCACTTGGGAACCACTCAGAACAGTCTAACAGAAGCAGACTTCCGAGAACTTGGGAAGAAAACTGATGGTTATTCAGGGGCAGATATAAGTATTATTGTTCGTGATGCGCTTATGCAGCCTGTTAGAAAAGTACAATCAGCTACTCATTTCAAAAGGGTTTGTGGACCTTCTCGAGCTGACCCCAACAACATCGTAGATGATCTGCTGACACCCTGCTCTCCGGGGGACCCTGGTGCCATTGAAATGACATGGATGGATGTCCCTGGAGATAAACTTTTGGAGCCAGTTGTTTCCATGTCGGATATGTTGCGGTCACTGTCTAACACAAAACCCACAGTCAATGAACACGACTTGTTGAAATTAAAGAAGTTTACAGAAGATTTTGGCCAAGAAGGCTAA

Related Sequences

XP_004858505.1 Protein

Vps4b PREDICTED: vacuolar protein sorting-associated protein 4B [Heterocephalus glaber]

Length: 444 aa      View alignments
>XP_004858505.1
MASTGSNLQKAIDLANKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKCTEYLDRAEKLKEYLKKREKTPQKPVKEGQPSPADEKGNDSDGEGESDDPEKKKLQNQLQGAIVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSRSENESEAARRIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRRRFEKRIYIPLPEAHARAAMFKLHLGTTQNSLTEADFRELGKKTDGYSGADISIIVRDALMQPVRKVQSATHFKRVCGPSRADPNNIVDDLLTPCSPGDPGAIEMTWMDVPGDKLLEPVVSMSDMLRSLSNTKPTVNEHDLLKLKKFTEDFGQEG