Sequence details NCBI ID: XM_004858411.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Malt1
Gene Name mucosa associated lymphoid tissue lymphoma translocation gene 1, transcript variant X2
Entrez Gene ID 101718499

Database interlinks

Part of NW_004624792.1 (Scaffold)

For more information consult the page for NW_004624792.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

MALT1 ENSCPOG00000012493 (Guinea pig)

Gene Details

mucosa associated lymphoid tissue lymphoma translocation gene 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011241, Guinea pig)

Protein Percentage 94.41%
CDS Percentage 93.01%
Ka/Ks Ratio 0.13101 (Ka = 0.0289, Ks = 0.2206)

MALT1 ENSG00000172175 (Human)

Gene Details

mucosa associated lymphoid tissue lymphoma translocation gene 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000319279, Human)

Protein Percentage 90.04%
CDS Percentage 87.7%
Ka/Ks Ratio 0.14336 (Ka = 0.0591, Ks = 0.4119)

Malt1 ENSMUSG00000032688 (Mouse)

Gene Details

mucosa associated lymphoid tissue lymphoma translocation gene 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000048376, Mouse)

Protein Percentage 87.68%
CDS Percentage 86.7%
Ka/Ks Ratio 0.1491 (Ka = 0.0651, Ks = 0.4367)

Malt1 ENSRNOG00000017181 (Rat)

Gene Details

Protein Malt1

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000059281, Rat)

Protein Percentage 88.67%
CDS Percentage 85.8%
Ka/Ks Ratio 0.11799 (Ka = 0.0609, Ks = 0.5161)

Genome Location

Sequence Coding sequence

Length: 2445 bp    Location: 4148272..4217658   Strand: +
Raw sequence   
>XM_004858411.1
ATGTCGCTGTGGGGGGAGCCGCTGCAGGCCCCGCTGCCCCCGGCCGCGCCCTCGGGGCCGCCACTCGCCGCTCAGGCCTGGACGACCGTCAGCAACCTGCGAGAGCCGCTGCTGCGGAGGCTCAGCGAGTGCTTGGACCGCGCGCCCGAGGGCCGGGGCTGGAGGCGGCTGGCCGAGCTGGCGGGCAGTCGGGGGCGCCTCCGGCTCAGTTGTCTGGACCTGGAGCAGTGTTCTCTTAAGGTATTGGAGCCTGAAGGAAGCCCAAGCCTGTGTTTACTGAAACTAATGGGTGAAAAAGGTTGTACAGTCACGGAATTGAGCGACTTCTTGCAGGCTATGGAACATACTGAGCTTCTTCAGCTTCTCAGCCCCCCAGGGATAAAGATCACTCTAAACCCAGAGTCAAAGGCAGTCTTGGCTGGACAGTTTGTGAAACTATGTTGCCGGGCAACTGGACATCCTTTTGTACAATACCAGTGGTTCAAAATGAATAAAGAGATTCCATATGGAAATGCATCAGAACTTATTTTTAACGCAGTGAGTGTAAAGGATACTGGCTTCTATGTCTGTCGTGTTAATAATAATTCTACATTTGAATTCAGCCAGTGGTCACAGCTAGATGTTTGTGAAGTGACAGAAGTAACAGAAACCTTCCAAAAACATTGGGATGAATCCAAGTTGCAAATCTGTGTTGAACCAAAGTCCCAGAAGCTAATGCCAGGAAGCACATTGGTTTTACAGTGTGTTGCTATTGGAAGCCCTATTCCTCACTACCAGTGGTTCAAAAATGAATCACCACTAACACATGAGACAAAAAAGGTATACATGGTGCCTTATGTGGATTTGGAACATCAAGGAACCTACTGGTGTCATGTATATAATGATCGAGATAGTCAAGACAGTATGAAGGTAGAAATCATCATAGATGAATTAAGTAATTTTGGCCATTCTGACAATAAAGAGCAAACAACTGACCAGTCTTTGGCAAAAGACAAAGTTGCTCTTTTGATAGGAAATATGAATTACTGGGAACACCCCAAGCTTAAAGCTCCCTTGGTGGATGTGTATGAGCTGACCAACTTGTTAAGACAGCTGGATTTCAAAGTCGTTTCATTGCTGGATCTAACCGAATATGAGATGCGTAATGCTGTGGATGAATTCTTACTACTTTTAGACAAAGGAGTGTATGGTTTACTGTATTATGCAGGACATGGTTATGAAAACTTCGGGAACAGCTTTATGGTCCCTGTTGATGCTCCAAATCCATATAGATCTGAAAATTGTCTGTGTGTACAAAATATACTGAAGTTGATGCAAGAAAAAGAAACTGGACTCAATGTGTTCTTGTTGGATATGTGTCGGAAAAGAAATGACTATGATGATACCATTCCAATCTTGGATGCACTCAAAGTCACTGCCAATATCGTGTTTGGATATGCCACGTGTCAAGGAGCAGAAGCTTTTGAAATCCAGCATTCTGGATTGGCAAATGGAATCTTTATGAAATTTTTAAAAGATAGATTACTTGAAGACAAGAAAATTACTGTGTTACTAGATGAAGTTGCAGAAGATATGGGCAAATGTCACCTTACCAAAGGTAAACAGGCTCTGGAGATTCGAAGCAGTTTGTCTGAAAAGAGAGCACTCACTGATCCGATTCAAGGGACAGCTTCTTCTGCAGAGTCTCTGGTGCGGAATCTGCAGTGGGCCAAGGCTCATGAACTTCCGGAAAGCATGTGTCTTAAATTTCAATGTGGTGTTCAGATTCAATTAGGATTTGCAGCTGAGTTTTCCAACGTCATGATAATCTATACAAGTATAGTCCATAAACCACCTGAGATAATAATGTGTGATGCCTATGTTACTGATTTTCCACTTGACCTAGATATTGACCCAAAAGATGCAAATAAAGGGACTCCGGAGGAAACTGGCAGCTACTTAGTATCAAAGGAGCTGCCCAAGCACTGCCTCTACACAAGACTCAGCTCCCTGCAAAAATTAAAGGAACATCTGATCTTTACAGTGTGTTTATCATATCAGTACTCAGGACTGGAGGACACTGTGGAAGAGAAACAGGAAGTGAATGTTGGGAAGCCTCTCATTGCTAAGTTAGACATGCACCGAAGTCTGGGCAGGAAGACTTGCTATCAGACATGCCTGATGTCTGACGGGCCATACCACAGCTCCACACCTGCCTCTGGGGGAACAGGGCATTATCCTTCATCTCAGGACTCATTCCATGGTGTCTACCATTCACATCTTGGTAATTCCGAGAGCGTTATGCCATCCGACAGATGTCATTGCAGCCGGACTCCTAATGCATTTATTTCAAGTTATCACACCCATCATTTTTCCTGTGGGCTTGCTAGGAGTAACATGCCAGTGGAGACAACCGATGAAATGCCATTCAGTTTCTCTGATGGGCTCAGGATTTCTGAAAAGTGA

Related Sequences

XP_004858468.1 Protein

Malt1 PREDICTED: mucosa-associated lymphoid tissue lymphoma translocation protein 1 isoform X2 [Heterocephalus glaber]

Length: 814 aa      View alignments
>XP_004858468.1
MSLWGEPLQAPLPPAAPSGPPLAAQAWTTVSNLREPLLRRLSECLDRAPEGRGWRRLAELAGSRGRLRLSCLDLEQCSLKVLEPEGSPSLCLLKLMGEKGCTVTELSDFLQAMEHTELLQLLSPPGIKITLNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPYGNASELIFNAVSVKDTGFYVCRVNNNSTFEFSQWSQLDVCEVTEVTETFQKHWDESKLQICVEPKSQKLMPGSTLVLQCVAIGSPIPHYQWFKNESPLTHETKKVYMVPYVDLEHQGTYWCHVYNDRDSQDSMKVEIIIDELSNFGHSDNKEQTTDQSLAKDKVALLIGNMNYWEHPKLKAPLVDVYELTNLLRQLDFKVVSLLDLTEYEMRNAVDEFLLLLDKGVYGLLYYAGHGYENFGNSFMVPVDAPNPYRSENCLCVQNILKLMQEKETGLNVFLLDMCRKRNDYDDTIPILDALKVTANIVFGYATCQGAEAFEIQHSGLANGIFMKFLKDRLLEDKKITVLLDEVAEDMGKCHLTKGKQALEIRSSLSEKRALTDPIQGTASSAESLVRNLQWAKAHELPESMCLKFQCGVQIQLGFAAEFSNVMIIYTSIVHKPPEIIMCDAYVTDFPLDLDIDPKDANKGTPEETGSYLVSKELPKHCLYTRLSSLQKLKEHLIFTVCLSYQYSGLEDTVEEKQEVNVGKPLIAKLDMHRSLGRKTCYQTCLMSDGPYHSSTPASGGTGHYPSSQDSFHGVYHSHLGNSESVMPSDRCHCSRTPNAFISSYHTHHFSCGLARSNMPVETTDEMPFSFSDGLRISEK