Sequence details NCBI ID: XM_004858348.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Rnls
Gene Name renalase, FAD-dependent amine oxidase, transcript variant X3
Entrez Gene ID 101715856

Database interlinks

Part of NW_004624791.1 (Scaffold)

For more information consult the page for NW_004624791.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RNLS ENSCPOG00000015490 (Guinea pig)

Gene Details

renalase, FAD-dependent amine oxidase

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013969, Guinea pig)

Protein Percentage 91.07%
CDS Percentage 92.46%
Ka/Ks Ratio 0.22454 (Ka = 0.044, Ks = 0.196)

RNLS ENSG00000184719 (Human)

Gene Details

renalase, FAD-dependent amine oxidase

External Links

Gene Match (Ensembl Protein ID: ENSP00000332530, Human)

Protein Percentage 87.21%
CDS Percentage 89.15%
Ka/Ks Ratio 0.26194 (Ka = 0.0706, Ks = 0.2696)

Rnls ENSMUSG00000071573 (Mouse)

Gene Details

renalase, FAD-dependent amine oxidase

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000093825, Mouse)

Protein Percentage 64.34%
CDS Percentage 74.94%
Ka/Ks Ratio 0.45813 (Ka = 0.2511, Ks = 0.5482)

Rnls ENSRNOG00000020705 (Rat)

Gene Details

renalase, FAD-dependent amine oxidase (Rnls), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000028098, Rat)

Protein Percentage 78.35%
CDS Percentage 81.53%
Ka/Ks Ratio 0.27191 (Ka = 0.1377, Ks = 0.5063)

Genome Location

Sequence Coding sequence

Length: 777 bp    Location: 14873710..14543577   Strand: -
Raw sequence   
>XM_004858348.1
ATGAAGCGGGTGCTGATCGTGGGCGCCGGGATGACAGGAAGCCTGTGCGCCGCCCTTCTGAGAAAAGTGTCCGGTACTCTCTACCTCGCCGTGTGGGACAAGGCTGGCGACTCAGGTGCAGAAGTCTACCTCAGACATTGTGTTACTCAGATCAACTTGAGAAATGGCAAGTGGGAAGTCTTCAAGGAAACAGGCTCCCCTGAGCAGTTTGATCTTGTTGTCCTTACAATTCCAGTTCCTCAGATTCTGCAGCTTCAAGGGGACTTTGCAAACTTAATTAGTGAATGCCAAAGACAGCAACTGGAGTCTGTAAGCTACTCGTCTCGCTATGCTCTGGGCCTCTTTTATGAAGCTGGCACGAAGATTGATGTCCCTTGGGCTGGGCAGTACATCACCAGTAATCCCTGCATACGCTTTGTCTCCATAGATAATAAGAAGCGCAATATAGAGTCGTCAGAAATCGGGCCTTCCCTGGTGATTCACACCACCGTCCCATTTGGAGTTACACACTTGGAACACAGCATTAAAGATGTACAGGAGTTAATCCTTCAGCAGCTGGAAAACATTTTGCCAGGTTTGCCTCAGCCAGTTGCTATCAAATGCCAGAAATGGAGACATTCACAGGTTACAAGTGGTCCTGCCAAATGCCCTGGCCAGATGACTCTTCATCTCAAACCTTTTCTTATGTGCGGAGGGGATGGATTTACTCAGTCCAACTTTGATGGCTGCATCACTTCTGCCCTATGTCTTCTGGAAGCTTTAAAGAATCATATTTAG

Related Sequences

XP_004858405.1 Protein

Rnls PREDICTED: renalase isoform X3 [Heterocephalus glaber]

Length: 258 aa      View alignments
>XP_004858405.1
MKRVLIVGAGMTGSLCAALLRKVSGTLYLAVWDKAGDSGAEVYLRHCVTQINLRNGKWEVFKETGSPEQFDLVVLTIPVPQILQLQGDFANLISECQRQQLESVSYSSRYALGLFYEAGTKIDVPWAGQYITSNPCIRFVSIDNKKRNIESSEIGPSLVIHTTVPFGVTHLEHSIKDVQELILQQLENILPGLPQPVAIKCQKWRHSQVTSGPAKCPGQMTLHLKPFLMCGGDGFTQSNFDGCITSALCLLEALKNHI