Details from NCBI annotation

Gene Symbol Sgms1
Gene Name sphingomyelin synthase 1, transcript variant X5
Entrez Gene ID 101710267

Database interlinks

Part of NW_004624791.1 (Scaffold)

For more information consult the page for NW_004624791.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SGMS1 ENSCPOG00000014981 (Guinea pig)

Gene Details

sphingomyelin synthase 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013503, Guinea pig)

Protein Percentage 96.6%
CDS Percentage 95.23%
Ka/Ks Ratio 0.11485 (Ka = 0.0165, Ks = 0.1436)

SGMS1 ENSG00000198964 (Human)

Gene Details

sphingomyelin synthase 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000354829, Human)

Protein Percentage 96.6%
CDS Percentage 95.47%
Ka/Ks Ratio 0.12304 (Ka = 0.0164, Ks = 0.1337)

Sgms1 ENSMUSG00000040451 (Mouse)

Gene Details

sphingomyelin synthase 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000117336, Mouse)

Protein Percentage 96.12%
CDS Percentage 92.96%
Ka/Ks Ratio 0.07192 (Ka = 0.0185, Ks = 0.2567)

Sgms1 ENSRNOG00000012536 (Rat)

Gene Details

sphingomyelin synthase 1 (Sgms1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000051643, Rat)

Protein Percentage 95.39%
CDS Percentage 91.91%
Ka/Ks Ratio 0.07496 (Ka = 0.0223, Ks = 0.2972)

Genome Location

Sequence Coding sequence

Length: 1239 bp    Location: 13218063..13096268   Strand: -
>XM_004858333.1
ATGAAGGAAGTGGTTTATTGGTCACCCAAGAAGGTGGCAGACTGGCTCCTGGAGAATGCTATGCCAGAATACTGTGAACCTCTGGAACATTTCACAGGCCAAGACTTAATCACCCTAACCCAAGAGGATTTCACAAAACCCCCCTTGTGCCGAGTCTCCTCAGACAACGGGCAGCGGCTCTTGGACATGATAGAGACCCTGAAAATGGAGCACCACATGGAAGTACACAAGAATGGCCACGCCAATGGGCACCTCATTGGCGTAGACCTCTCCACCCCTGATGGCAGCTTCAACGTCAAGACAAAACCCAATGGGATACCAAATGGGTATAGGAAAGAGATGATACAGATCCCCATGCCAGAACTGGAACGCTCCCAGTACCCCATGGAGTGGGGCAAGACTTTTCTGGCCTTTCTTTATGCACTTTCCTGTTTTGTCCTCACCACAGTGATGATCTCGGTCGTCCATGAACGAGTACCTCCTAAGGAGGTGCAGCCTCCACTACCAGACACATTTTTTGACCATTTTAACCGGGTGCAGTGGGCCTTTTCTATTTGTGAAATTAATGGCATGATCCTTGTAGGACTTTGGTTAATTCAGTGGCTGCTCTTAAAATACAAGTCTATTATTAGCAGAAGATTTTTCTGCATAGTTGGCACGCTGTACCTGTATCGGTGTATTACAATGTATGTAACTACACTCCCAGTACCTGGTATGCATTTCAACTGTTCTCCGAAGCTTTTTGGTGACTGGGAAGCCCAAGTGCGAAGAATAATGAAGCTAATTGCTGGAGGTGGTTTGTCTATCACTGGTTCTCACAACATGTGTGGGGACTATCTGTACAGCGGGCACACGGTCATGCTAACACTCACCTACTTATTTATCAAAGAGTATTCCCCTCGACGACTCTGGTGGTACCACTGGATTTGCTGGCTTCTCAGTGTCGTTGGAATCTTCTGTATTCTCTTAGCGCATGACCACTACACTGTGGACGTGGTGGTGGCATATTACATCACCACAAGACTCTTCTGGTGGTATCACACTATGGCCAATCAGCAAGTGCTAAAGGAAGCTTCCCAGATGAACCTCCTGGCCAGGGTGTGGTGGTACAGGCCATTTCAGTACTTTGAAAAGAACGTTCAGGGAATTGTACCTCGATCTTACCATTGGCCTTTTCCCTGGCCAGTAGTCCACCTTGGTAAGCAAGTTAAATACAGCCGGTTGGTGAACGACACATAA

Related Sequences

XP_004858390.1 Protein

Sgms1 PREDICTED: phosphatidylcholine:ceramide cholinephosphotransferase 1 isoform X5 [Heterocephalus glaber]

Length: 412 aa      View alignments
>XP_004858390.1
MKEVVYWSPKKVADWLLENAMPEYCEPLEHFTGQDLITLTQEDFTKPPLCRVSSDNGQRLLDMIETLKMEHHMEVHKNGHANGHLIGVDLSTPDGSFNVKTKPNGIPNGYRKEMIQIPMPELERSQYPMEWGKTFLAFLYALSCFVLTTVMISVVHERVPPKEVQPPLPDTFFDHFNRVQWAFSICEINGMILVGLWLIQWLLLKYKSIISRRFFCIVGTLYLYRCITMYVTTLPVPGMHFNCSPKLFGDWEAQVRRIMKLIAGGGLSITGSHNMCGDYLYSGHTVMLTLTYLFIKEYSPRRLWWYHWICWLLSVVGIFCILLAHDHYTVDVVVAYYITTRLFWWYHTMANQQVLKEASQMNLLARVWWYRPFQYFEKNVQGIVPRSYHWPFPWPVVHLGKQVKYSRLVNDT