Details from NCBI annotation

Gene Symbol Fam13c
Gene Name family with sequence similarity 13, member C, transcript variant X2
Entrez Gene ID 101724014

Database interlinks

Part of NW_004624791.1 (Scaffold)

For more information consult the page for NW_004624791.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

FAM13C ENSCPOG00000004183 (Guinea pig)

Gene Details

family with sequence similarity 13, member C

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003772, Guinea pig)

Protein Percentage 92.35%
CDS Percentage 93.1%
Ka/Ks Ratio 0.21269 (Ka = 0.0381, Ks = 0.1793)

FAM13C ENSG00000148541 (Human)

Gene Details

family with sequence similarity 13, member C

External Links

Gene Match (Ensembl Protein ID: ENSP00000362975, Human)

Protein Percentage 88.45%
CDS Percentage 89.25%
Ka/Ks Ratio 0.20083 (Ka = 0.0616, Ks = 0.3069)

Fam13c ENSMUSG00000043259 (Mouse)

Gene Details

family with sequence similarity 13, member C

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000051375, Mouse)

Protein Percentage 84.28%
CDS Percentage 82.89%
Ka/Ks Ratio 0.14382 (Ka = 0.0918, Ks = 0.6382)

Fam13c ENSRNOG00000000275 (Rat)

Gene Details

family with sequence similarity 13, member C

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000048490, Rat)

Protein Percentage 77.93%
CDS Percentage 77.76%
Ka/Ks Ratio 0.16666 (Ka = 0.1458, Ks = 0.8748)

Genome Location

Sequence Coding sequence

Length: 1806 bp    Location: 4175478..4297289   Strand: +
>XM_004858290.1
ATGTTTTCTTGTTTCTGTTTCAGCCTTCAGGATAATTCCTTCAGCAGCACCGCTGTAACAGAGTGTGACGAAGATACAGTTTCTCTACATGAAGACCAGACTGATTGTTCTAGTCTTAGAGATGAAAACAACAAAGAGAATTACCCGGACACTGGCGCTCGAGTAGAGGAGCACCAGCCCTCGTCGCATGAGGCGCAGCAGCATGTAGAGCAGACCTTGCTGCTGGACGGCTTGTTGCGACCCAGCATGGGCAATTTCAAGTCCCGGAAGCCCAAGTCCATCTTCAAAACTGAGAGCGGGAGGAGCCACGGAGAAAGTCAGGAGACAGAGCATGTGGTGCCCAGCCAGTCCGAGTGCCTGGGTAGAGCAGGAACACCAGTTTATGAGAGTCCACAAAACAACTCCTTCAGGTGCCAGGAAACAGTGCCACTCCAACCAAGAATAGACCAGAGGGCTGCCATTTGGCCAAAGGATGCTTTTGAAACTCAGCAAGACTTAAATGAAAATTCTTTGCTGAAGCTTCAAGCCCTTGAATCTGACTTGTGCTCTGCATTTTTGACAAACCAGGAAGCTGCTGCCCAGGTGCACGGAGTCAAGGACCCAGCCCCAACATCAAGCCAGAGTGTGCCGGCTGATGGAGCCAATTCTGCAGACTCCATGACAACCCACAAAGATGGGCAAAATGAAGCCGACAGCACACCAGAAGATGTGTCTGTGGGAACCAGCAGGCTGCTCTATCACATCACTGATGGTGATAACCCCCTGCTGTCACCTCGATGCTCCATCTTCAGCCAGAGCCAGAGATTCAACTTAGACCCTGAGTCAGCCCCTTCTCCACCCAGCACTCAGCAGTTTATGATGCCCCGAAGTTCCTCACGGTGCAGCTGCGGTGACGGCAAGGAGCCGCAGACCATTGCCCAGCTCACCAAGCATATCCAGAGTCTCAAGCGGAAAATCCGGAAATTTGAAGAAAAGTTTGAGCAAGAAAGGAAGTATCGGCCTTCACATGGTGACAAGACTTCTAATCCTGAAGTACTGAAATGGATGAACGATTTGGCTAAAGGTCGTAAACAGCTCAAAGAACTAAAGCTGAAACTATCAGAAGAACAAGGGAGTGCTCCTAAAGGCCCTCTGAGAAACCTGTCCTGTGAGCAACCTATTGTCCCAAGAGAAAATGGGAAGCCAGAAGCTACAGGCCCTGAGCCAAGCTCTTCTGGAGAGGAGACTTCAGATGCTGTGTGGACATACCTAAAGGAGAAGAGAGAGCACTTCCCTCCTGAGGAGGAGTCTAAGGTAATTAAGCAAGACAAGAATCTCATAAAGCCCTTTTATGATCGATACAGAATTATCAAGCAAATCTTGTCAACTCCTTCCCTTATACCAACAATTGAGGAAGAGGACTCTGATGAAGACTGTCAACAGGGAAGCCAACAACCTTTACCAGATTCAAGTTCTTACCTTCCTGTTGGTGACCACCTCGCCTACTCTGAGACAGAGCCTATTAGGGCCCTGATACCAGATGAAAAGAAAGAAGTAAAACAGCCCGCTCTCTCCATGTCTAATTTACATGAGGCTACTATGCCTGTACTTCTTGACCATCTCCGAGAAACTAGGGCTGACAAGAAGAGACTAAGGAAAGCCCTAAGAGAATTTGAAGAACAGTTTTTTAAACAAACAGGAAGAAGTCCACAAAAGGAAGATAGGATACCGATGGCAGATGAGTACTATGAATACAAGCACATAAAAGCCAAACTGAGACTATTAGAGGTCCTCATCAGCAAGCAAGACGTGGCCAAAACTATTTGA

Related Sequences

XP_004858347.1 Protein

Fam13c PREDICTED: protein FAM13C isoform X2 [Heterocephalus glaber]

Length: 601 aa      View alignments
>XP_004858347.1
MFSCFCFSLQDNSFSSTAVTECDEDTVSLHEDQTDCSSLRDENNKENYPDTGARVEEHQPSSHEAQQHVEQTLLLDGLLRPSMGNFKSRKPKSIFKTESGRSHGESQETEHVVPSQSECLGRAGTPVYESPQNNSFRCQETVPLQPRIDQRAAIWPKDAFETQQDLNENSLLKLQALESDLCSAFLTNQEAAAQVHGVKDPAPTSSQSVPADGANSADSMTTHKDGQNEADSTPEDVSVGTSRLLYHITDGDNPLLSPRCSIFSQSQRFNLDPESAPSPPSTQQFMMPRSSSRCSCGDGKEPQTIAQLTKHIQSLKRKIRKFEEKFEQERKYRPSHGDKTSNPEVLKWMNDLAKGRKQLKELKLKLSEEQGSAPKGPLRNLSCEQPIVPRENGKPEATGPEPSSSGEETSDAVWTYLKEKREHFPPEEESKVIKQDKNLIKPFYDRYRIIKQILSTPSLIPTIEEEDSDEDCQQGSQQPLPDSSSYLPVGDHLAYSETEPIRALIPDEKKEVKQPALSMSNLHEATMPVLLDHLRETRADKKRLRKALREFEEQFFKQTGRSPQKEDRIPMADEYYEYKHIKAKLRLLEVLISKQDVAKTI