Details from NCBI annotation

Gene Symbol Arid5b
Gene Name AT rich interactive domain 5B (MRF1-like), transcript variant X1
Entrez Gene ID 101714679

Database interlinks

Part of NW_004624791.1 (Scaffold)

For more information consult the page for NW_004624791.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ARID5B ENSCPOG00000003685 (Guinea pig)

Gene Details

AT rich interactive domain 5B (MRF1-like)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003325, Guinea pig)

Protein Percentage 96.4%
CDS Percentage 94.44%
Ka/Ks Ratio 0.10967 (Ka = 0.0186, Ks = 0.1693)

ARID5B ENSG00000150347 (Human)

Gene Details

AT rich interactive domain 5B (MRF1-like)

External Links

Gene Match (Ensembl Protein ID: ENSP00000279873, Human)

Protein Percentage 93.43%
CDS Percentage 91.52%
Ka/Ks Ratio 0.12174 (Ka = 0.0338, Ks = 0.2773)

Arid5b ENSMUSG00000019947 (Mouse)

Gene Details

AT rich interactive domain 5B (MRF1-like)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000020106, Mouse)

Protein Percentage 88.72%
CDS Percentage 85.13%
Ka/Ks Ratio 0.10108 (Ka = 0.0611, Ks = 0.6049)

Genome Location

Sequence Coding sequence

Length: 3582 bp    Location: 1785455..1610169   Strand: -
>XM_004858263.1
ATGGAGCCCAACTCACTCCAGTGGGTCGGCTCACCGTGTGGCTTGCACGGACCTTACATTTTCTACAAGGCTTTTCAATTCCACCTTGAAGGCAAACCAAGAATTTTGTCCCTTGGCGACTTTTTCTTTGTAAGATGTACGCCAAAGGATCCGATTTGCATAGCGGAGCTCCAGCTGTTGTGGGAAGAAAGGACCAGCCGGCAACTTTTATCCAGCTCTAAACTTTATTTTCTCCCCGAAGACACTCCCCAGGGCAGAAATAGCGACCATGGCGAGGATGAAGTCATTGCTGTTTCTGAAAAGGTGATTGTGAAACTTGAAGACCTGGTCAAGTGGGTACATTCTGATTTCTCCAAGTGGAGATGCGGTCTCCAGGCTGGGCCAGTGAAAACGGAAACCTTGGGAAGAAATGGACAGAAGGAAGCTCTGCTGAAGTACAGACAGTCCACCCTCAACAGTGGACTCAACTTCAAAGACGTTCTCAAGGAAAAGGCTGACCTTGGGGAGGACGAGGAAGAAACGAATGTAATCGTTCTCAGCTACCCTCAGTACTGCCGGTACCGCTCTATGCTGAAGCGCATCCAGGATAAGCCATCTTCCATTCTAACGGACCAGTTTGCATTAGCCCTGGGGGGCATTGCAGTGGTCAGCAGGAACCCCCAGATCCTGTACTGTCGAGACACGTTTGACCACCCCACTCTCATAGAAAATGAGAGTATATGCGATGAGTTTGCGCCAAATCTTAAAGGTAGACCACGCAAAAAGAAAGCATGCCCACAGAGAAGAGATTCCTTCAGTGGAGTTAAGGATTCCAACAATAATTCTGATGGAAAAGCTGTTGCCAAGGTGAAATGTGAGGCCAGGTCAGCCTTGGCCAAGCCAAAGAATAACCATAATAACTGTAAAAAAGTCTCAAATGAAGAAAAACCAAAGCTGGCCATTGGTGAAGAATGCAGGGCAGATGAACAGGCCTTCTTGGTGGCACTTTATAAATACATGAAAGAAAGAAAAACGCCAATAGAAAGAATACCCTATTTAGGTTTTAAACAGATTAACCTTTGGACTATGTTTCAAGCTGCTCAAAAACTGGGAGGATATGAAACAATAACAGCCCGCCGCCAATGGAAACATATTTATGATGAATTAGGTGGTAATCCTGGGAGCACCAGCGCTGCCACTTGTACCCGCAGGCATTATGAAAGATTAATCCTACCTTATGAAAGGTTTATTAAGGGAGAGGAAGATAAGCCCTTGCCTCCAATCAAACCTCGGAAACAGGAGAACAGTTCACAAGAGAATGAGAATAAAACAAAAGTATCAGGAACCAAACGCATCAAACATGAAATACTTAAGAGCAAGAAAGAAAAAGAGAATGCACCGAAGCCCCAGGATGCATCCGAGGTTTCATCAGAGCCAGAGAAAGAACAAGAGTCTTTAAACCAGAAAAGCATCGCAGAACCTCTCATGGCAGCAGATGTGAAGAAAAAAGCAGAAGGGTACCAGGATTTTGCAGCAAGGTCCCTGGCATCCAGAGCAGACCCAGAAAAGGACAATGAAACAGACCAAGGTTCTAACAGTGAGAAGGAGGCCGAGGAGGTGGGCGAGAAGGGACCTGCAGCTCCACTCCCCAGCATGCCCCTGGCCCCGGAGAGGGACCCAGTGCCCATCCCTGGGGCTGGCAAACAGTCCCTGGCCTCTCCTGATGCCCCCGTGGATACAAAGCAGGAATCCAAATCCTGCTGTTTTACAGAGAACACTGAAAATGACCCCCAAGATGCATCCTTTCCTGGCTTCTCCACCACACAGCCACCACTGGCAAACCAGAATGAGACAGAGGATGACAAACTGCCTGCAATGGCAGATTACATTGCCAACTGCACTGTGAAGGTAGACCAGCTGGGCAGTGATGACATCCACAATGCACTAAAGCAGACCCCAAAGGTCCTTGTGGTCCAGTCATTTGACATGTTCAAAGACAAAGATTTGACTGGGCCCATGAACGAAAACCATGGACTTAATTACACACCCCTGCTCTACTCCAGGGGCAATCCAGGCATCATGTCCCCACTGGCCAAGAAAAAGCTTTTGTCCCAAGTGAGTGGTGCCAGCCTCTCTAGCAGCTACCCCTATGGCTCCCCACCCCCTTTGATCAGCAAAAAGAAACTGATTGCCAGGGATGACTTGTGTTCCGGTTTGTCCCAGGCCCACCACAGCCAAAGCACTGACCACATGGCGGTCAGCAGGCCATCAGTGATTCAGCACGTCCAGAGTTTCAAAAGCAAGCCCTCAGAGGAGAGGAAGAGCATCGGTGATATATTCAAGCATGACAAACTGAGTCGATCGGATGCCCACCGCTGTAGCTTCTCCAAGCATCATTTTAACTCCCTGGCTGACTCCTATGTCTTGAAGCAAGAAATTCAGGAGGGCAAGGATAAACTTTTAGAGAAAAGGGCGCTCCCCCATTCCCACATGCCTAGCTTCCTGGCAGATTTCTACTCGTCCCCACATCTCCATAGCCTCTATCGACATACAGAACACCACCTTCATAATGAACAATCATCCAAGTACGCTTCCAGGGACATGTACAGGGAGTCAGAAAGCAGTTCTTTCGCTTCCCACAAACACCAAGAAAAGCTCCATGTAAATTATCTCGCGTCTCTTCATCTGCAAGACAAAAAATTGGCTGCAGAAAAGTTGGCCACAGCAGAAATCTCTACAGATGATCAGCCAACAGATCTGAGCCTCCCCAAGAACCCACACAAACTGACCAGTAAGGTCCTGGGCCTGGCCCATTCAGCCACAGGGCCCCAAGAGAGCAAAGGTGTCTCCCAATTCCAGGTCATCAGCAGCCAGAGTCGAGACTGTCACCCCAAAGCCTGTCGGGTCTCACCCATGACCATGTCGGGTCCTAAAAAATACCCCGAATCACTTTCAAGATCCGGAAAATCTCACCATGTGAGACTGGAGAATTTCAGAAAGATGGAAGGCATGGTCCATCCTATCCTGCATCGGAAAATGAGTCCTCAGAACATTGGTGCTGCGCGTCCCATAAAGCGAAGCCTGGAGGATTTGGACCTTGTGATTGCTGGGAAAAAGGCCCGAGCGGTGTCTCCCTTGGACCCAGCCAAGGAGGCTTCCGGGAAGGAGAAGTCTTCTGAGCAGGAGAGTGAAGGCACCAAGGCCACCTACGGAGGGCATTCTGGTGGAGGATCAGAAGGCCACAAGCTCCCCCTGTCCTCCCCAATCTTCCCAGGTTTGTATTCTGGGAGCCTGTGTAACTCGGGCCTTAACTCCAGGCTCCCAGCTGGGTATTCTCACTCTCTGCAGTACTTGAAAAACCAGACTGTGCTTTCTCCACTCATGCAGCCTCTGGCTTTCCACTCACTTGTGATGCAAAGAGGAATTTTTACATCACCAACAAATTCTCAGCAGCTGTACAGACACTTGGCTGCGGCCACGCCTGTGGGAAGTTCATATGGGGACCTTTTGCACAACAGCATTTACCCTTTAGCTGCTATAAATCCTCAAGCTGCCTTTCCACCTTCCCAGCTGTCGTCCGTACATCCCAGTACGAAACTGTAA

Related Sequences

XP_004858320.1 Protein

Arid5b PREDICTED: AT-rich interactive domain-containing protein 5B isoform X1 [Heterocephalus glaber]

Length: 1193 aa     
>XP_004858320.1
MEPNSLQWVGSPCGLHGPYIFYKAFQFHLEGKPRILSLGDFFFVRCTPKDPICIAELQLLWEERTSRQLLSSSKLYFLPEDTPQGRNSDHGEDEVIAVSEKVIVKLEDLVKWVHSDFSKWRCGLQAGPVKTETLGRNGQKEALLKYRQSTLNSGLNFKDVLKEKADLGEDEEETNVIVLSYPQYCRYRSMLKRIQDKPSSILTDQFALALGGIAVVSRNPQILYCRDTFDHPTLIENESICDEFAPNLKGRPRKKKACPQRRDSFSGVKDSNNNSDGKAVAKVKCEARSALAKPKNNHNNCKKVSNEEKPKLAIGEECRADEQAFLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQKLGGYETITARRQWKHIYDELGGNPGSTSAATCTRRHYERLILPYERFIKGEEDKPLPPIKPRKQENSSQENENKTKVSGTKRIKHEILKSKKEKENAPKPQDASEVSSEPEKEQESLNQKSIAEPLMAADVKKKAEGYQDFAARSLASRADPEKDNETDQGSNSEKEAEEVGEKGPAAPLPSMPLAPERDPVPIPGAGKQSLASPDAPVDTKQESKSCCFTENTENDPQDASFPGFSTTQPPLANQNETEDDKLPAMADYIANCTVKVDQLGSDDIHNALKQTPKVLVVQSFDMFKDKDLTGPMNENHGLNYTPLLYSRGNPGIMSPLAKKKLLSQVSGASLSSSYPYGSPPPLISKKKLIARDDLCSGLSQAHHSQSTDHMAVSRPSVIQHVQSFKSKPSEERKSIGDIFKHDKLSRSDAHRCSFSKHHFNSLADSYVLKQEIQEGKDKLLEKRALPHSHMPSFLADFYSSPHLHSLYRHTEHHLHNEQSSKYASRDMYRESESSSFASHKHQEKLHVNYLASLHLQDKKLAAEKLATAEISTDDQPTDLSLPKNPHKLTSKVLGLAHSATGPQESKGVSQFQVISSQSRDCHPKACRVSPMTMSGPKKYPESLSRSGKSHHVRLENFRKMEGMVHPILHRKMSPQNIGAARPIKRSLEDLDLVIAGKKARAVSPLDPAKEASGKEKSSEQESEGTKATYGGHSGGGSEGHKLPLSSPIFPGLYSGSLCNSGLNSRLPAGYSHSLQYLKNQTVLSPLMQPLAFHSLVMQRGIFTSPTNSQQLYRHLAAATPVGSSYGDLLHNSIYPLAAINPQAAFPPSQLSSVHPSTKL