Details from NCBI annotation

Gene Symbol Ptprt
Gene Name protein tyrosine phosphatase, receptor type, T, transcript variant X2
Entrez Gene ID 101720013

Database interlinks

Part of NW_004624790.1 (Scaffold)

For more information consult the page for NW_004624790.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PTPRT ENSCPOG00000014543 (Guinea pig)

Gene Details

protein tyrosine phosphatase, receptor type, T

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013105, Guinea pig)

Protein Percentage 97.33%
CDS Percentage 92.36%
Ka/Ks Ratio 0.05694 (Ka = 0.0174, Ks = 0.3061)

PTPRT ENSG00000196090 (Human)

Gene Details

protein tyrosine phosphatase, receptor type, T

External Links

Gene Match (Ensembl Protein ID: ENSP00000362283, Human)

Protein Percentage 99.13%
CDS Percentage 92.01%
Ka/Ks Ratio 0.00937 (Ka = 0.0039, Ks = 0.4207)

Ptprt ENSMUSG00000053141 (Mouse)

Gene Details

protein tyrosine phosphatase, receptor type, T

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000105071, Mouse)

Protein Percentage 98.68%
CDS Percentage 90.69%
Ka/Ks Ratio 0.01384 (Ka = 0.0067, Ks = 0.4851)

Ptprt ENSRNOG00000032656 (Rat)

Gene Details

protein tyrosine phosphatase, receptor type, T (Ptprt), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000041324, Rat)

Protein Percentage 98.66%
CDS Percentage 90.39%
Ka/Ks Ratio 0.01384 (Ka = 0.0069, Ks = 0.5011)

Genome Location

Sequence Coding sequence

Length: 4290 bp    Location: 11368740..12144874   Strand: +
>XM_004858217.1
ATGCTGGACCCAGCAGTGCCCACAGGATCCTTCATGATGGTGAACAGCTCTGGGAGGGCCTCTGGCCAGAAGGCTCACCTTCTTCTGCCCACCTTGAAGGAGAACGACACCCACTGCATTGACTTTCATTACTACTTCTCCAGCCGTGACCGCTCCAGCCCGGGGGCTTTGAATGTCTACGTGAAGGTCAATGGTGGACCCCAGGGGAACCCTGTCTGGAATGTGTCTGGGGTAGTCACCGAGGGCTGGGTGAAGGCGGAACTTGCCATTAGCACCTTCTGGCCACATTACTACCAGGTGATTTTTGAATCCGTCTCTTTGAAAGGTCATCCTGGCTACATCGCTGTGGACGAGGTCCGGGTCCTTGCTCATCCATGCAGAAAAGCACCCCATTTTCTACGACTCCAAAACGTCGAGGTGAACGTGGGGCAGAATGCCACATTTCAGTGCATTGCTGGTGGGAAGTGGTCTCAGCATGACAAACTTTGGCTTCAGCAGTGGAATGGCAGAGACACGGCCCTCATGGTCACTCGTGTGGTTAACCACAGGCGTTTCTCGGCCACAGTCAGCGTGGCAGACACTGCCCAGCGCAGTGTCAGCAAATACCGCTGCGTGATCCGCTCGGATGGTGGGTCTGGCGTTTCCAACTACGCAGAGCTGATTGTGAAAGAGCCCCCCACGCCCATCGCGCCCCCGGAGCTGCTGGCGGTGGGGGCCACCTACCTGTGGATCAAGCCAAATGCCAACTCCATCATTGGGGATGGACCCATCATCCTGAAGGAGGTGGAGTACCGCACCACCACAGGCACTTGGGCCGAGACCCACATCGTTGACTCTCCTAACTATAAGCTGTGGCATCTGGACCCCGATGTGGAGTATGAGATCCGAGTGCTGCTTACAAGGCCAGGGGAAGGGGGAACAGGACCTCCAGGGCCTCCCCTCACCACTAGGACCAAGTGTGCCGACCCTGTGCATGGCCCACAGAATGTGGAGATTGTGGACATCCGAGCCCGGCAGCTGACCCTCCAGTGGGAGCCCTTTGGCTATGCAGTGACCCGCTGCCACAGCTACAATCTCACAGTGCAATACCAGTACGTGTTCAACCAGCAGCAGTACGAGGCTGAAGAGGTCATCCAGACCTCTTCCCATTACACCCTGCGGGGCCTGCGCCCCTTCATGACCATCAAGCTGCGGCTACTGCTGTCCAACCCTGAGGGACGGATGGAGAGTGAGGAGCTGGTGGTGCAGACTGAAGAGGATGTTCCGGGAGCTGTTCCTCTTGAATCCATCCAAGGGGGACCTTTTGAAGAGAAGATCTACATCCAGTGGAAACCTCCCAATGAAACCAATGGTGTCATCACACTCTACGAGATCAACTACAAGGCTGTTGGCTCCCTGGACCCAAGTGCTGACCTGTCCAGCCAGAGGGGGAAGGTGTTCAAGCTCCGGAATGAAACTCACCACCTTTTTGTGGGTCTGTATCCAGGGACCACCTATTCCTTCACCATCAAGGCCAGCACAGCCAAGGGCTTTGGGTCCCCAGTTACCACTCGGATTGCTACCAAAATTTCAGCTCCTTCGATGCCTGAATATGATACAGACACCCCACTGAATGAAACGGACACAACCATCACAGTAATGCTGAAACCAGCCCAGTCCAGGGGAGCTCCTGTCAGTGTGTATCAGCTGGTTGTCAAGGAGGAGCGACTTCAGAATTCACGAAGAGCAGCTGACATCATTGAGTGCTTCTCAGTACCTGTGAGCTATAGGAATGCCTCCAGCCTGGATTCTCTACACTACTTTGCTGCTGAATTGAAGCCCGCCAATCTGCCTGTCACCCAACCATTTACAGTGGGTGACAACAAAACATACAATGGCTACTGGAACCCCCCTCTCTCCCCACTGAAAAGCTACAGCATCTACTTCCAGGCACTCAGTAAAGCAAATGGAGAGACCAAAATCAACTGTGTTCGTCTGGCTACGAAAGGTGCCTCCTCACAGAACTCTAACACCGTGGAACCAGAGAAGCAGGTGGACAACACTGTGAAGATGGCTGGCGTGATCGCTGGCCTCCTCATGTTCATCATCATTCTACTGGGTGTGATGCTCACTATCAAAAGGAGAAATGCTTATTCCTACTCCTATTACTTGAAGCTGGCCAAGAAGCAGAAGGAGACACAGAGTGGAGCCCAGAGAGAGATGGGACCTGTGGCCTCAGCTGACAAACCCACCACCAAGCTCAGCACCAGCCGCAACGATGAAGGCTTCTCCTCTAGTTCCCAGGATGTTAATGGATTTACAGACGGCAGCCATGGGGAGCTGTCCCAGCCCACCCTCACGATCCAGACTCATCCCTACCGGACCTGTGACCCTGTGGAGATGAGCTACCCCCGGGACCAGTTCCAACCTGCCATCCGTGTAGCCGACCTGTTGCAGCACATCACCCAGATGAAGAGAGGCCAGGGCTACGGGTTCAAGGAGGAATATGAGAAAGATCTCTCTGATTACAGTGGAGGATGGATTGGAGGGGACAAACCCAAAGCAAGAGAACCCAAAGAGGAGATTCATGGGAAAGTATTTCTCCAGGCCTTACCAGAGGGGCAGACAGCTTCGTGGGATACAGCCAAGGAAGATGAAAACCGCAATAAGAATCGATATGGGAACATCATATCTTATGACCATTCCCGGGTGAGGCTGCTGGTGCTGGATGGAGACCCACACTCGGACTATATCAACGCCAACTACATTGATGGGTACCATCGACCACGGCACTACATTGCAACCCAAGGTCCCATGCAGGAGACGGTGAAGGACTTCTGGAGAATGATCTGGCAGGAGAACTCGGCCAGCATCGTCATGGTCACAAACCTGGTGGAAGTGGGCAGGCACCCAGCGGAACACACTGTGGGAAATGCCACGCTAGGCCGTGCGGCGTCCCCCGGAATGGTGAAGTGTGTGAGATACTGGCCAGATGACACAGAAGTCTATGGAGACATTAAAGTCACCCTGATTGAAACAGAGCCCCTAGCAGAATATGTCATCCGTACCTTCACAGTCCAGAAGAAAGGCTACCATGAGATCCGGGAACTCCGCCTCTTTCACTTCACCAGCTGGCCCGACCATGGCGTCCCCTGCTATGCCACTGGCCTTCTGGGCTTCGTCCGCCAGGTCAAGTTTCTCAATCCTCCAGAGGCTGGACCCATAGTGGTCCACTGCAGTGCTGGAGCTGGGAGGACTGGCTGCTTCATCGCCATTGATACCATGCTTGACATGGCTGAGAATGAAGGGGTGGTGGACATCTTCAACTGTGTGCGTGAGCTCCGAGCACAGAGAGTCAACTTGGTGCAGACAGAGGAGCAGTATGTGTTTGTGCACGACGCCATCCTGGAAGCATGTCTCTGCGGCAACACGGCCATCCCCGTGTGTGAGTTCCGCTCTCTCTACTACAACATCAGTAGGCTGGACCCTCAGACAAACTCCAGCCAGATCAAAGATGAGTTTCAGACACTCAACATTGTGACACCTCGAGTCCGGCCCGAGGACTGCAGCATCGGGCTCCTGCCCCGGAACCATGATAAGAATCGGAACATGGATGTCCTGCCTCTGGACCGCTGCCTGCCTTTCCTCATCTCAGTGGATGGAGAATCCAGCAACTATATCAATGCAGCACTGATGGATAGCCACAAGCAACCTGCCGCCTTTGTGGTCACCCAGCACCCTCTACCCAACACTGTGGCAGACTTCTGGAGGCTGGTGTTCGATTATAACTGCTCCTCCGTGGTGATGCTGAATGAGATGGACTCCACCCAGCTCTGCATGCAGTACTGGCCTGAGAAAACATCTGGGTGCTACGGGCCCATCCAGGTGGAGTTTGTCTCAGCAGACATCGACGAGGATATCATCCACAGAATATTCCGCATCTGCAACATGGCTCGGCCCCAGGATGGATATCGTATAGTCCAGCACCTCCAGTACATTGGCTGGCCTGCCTACCGGGACACACCCCCCTCCAAGCGCTCTCTGCTCAAAGTGGTCCGGAGGCTGGAGAAGTGGCAGGAGCAGTACGATGGGAGGGAGGGACGCACTGTGGTCCACTGCCTAAACGGGGGAGGTCGCAGTGGAACCTTTTGTGCCATCTGCAGCGTGTGTGAGATGATCCAGCAACAAAACATCATTGATGTGTTCCACATTGTGAAAACACTGCGGAATAACAAATCCAACATGGTGGAGACGCTGGAACAGTATAAATTTGTATACGAGGTGGCACTGGAATATTTAAGCTCCTTTTAG

Related Sequences

XP_004858274.1 Protein

Ptprt PREDICTED: receptor-type tyrosine-protein phosphatase T isoform X2 [Heterocephalus glaber]

Length: 1429 aa      View alignments
>XP_004858274.1
MLDPAVPTGSFMMVNSSGRASGQKAHLLLPTLKENDTHCIDFHYYFSSRDRSSPGALNVYVKVNGGPQGNPVWNVSGVVTEGWVKAELAISTFWPHYYQVIFESVSLKGHPGYIAVDEVRVLAHPCRKAPHFLRLQNVEVNVGQNATFQCIAGGKWSQHDKLWLQQWNGRDTALMVTRVVNHRRFSATVSVADTAQRSVSKYRCVIRSDGGSGVSNYAELIVKEPPTPIAPPELLAVGATYLWIKPNANSIIGDGPIILKEVEYRTTTGTWAETHIVDSPNYKLWHLDPDVEYEIRVLLTRPGEGGTGPPGPPLTTRTKCADPVHGPQNVEIVDIRARQLTLQWEPFGYAVTRCHSYNLTVQYQYVFNQQQYEAEEVIQTSSHYTLRGLRPFMTIKLRLLLSNPEGRMESEELVVQTEEDVPGAVPLESIQGGPFEEKIYIQWKPPNETNGVITLYEINYKAVGSLDPSADLSSQRGKVFKLRNETHHLFVGLYPGTTYSFTIKASTAKGFGSPVTTRIATKISAPSMPEYDTDTPLNETDTTITVMLKPAQSRGAPVSVYQLVVKEERLQNSRRAADIIECFSVPVSYRNASSLDSLHYFAAELKPANLPVTQPFTVGDNKTYNGYWNPPLSPLKSYSIYFQALSKANGETKINCVRLATKGASSQNSNTVEPEKQVDNTVKMAGVIAGLLMFIIILLGVMLTIKRRNAYSYSYYLKLAKKQKETQSGAQREMGPVASADKPTTKLSTSRNDEGFSSSSQDVNGFTDGSHGELSQPTLTIQTHPYRTCDPVEMSYPRDQFQPAIRVADLLQHITQMKRGQGYGFKEEYEKDLSDYSGGWIGGDKPKAREPKEEIHGKVFLQALPEGQTASWDTAKEDENRNKNRYGNIISYDHSRVRLLVLDGDPHSDYINANYIDGYHRPRHYIATQGPMQETVKDFWRMIWQENSASIVMVTNLVEVGRHPAEHTVGNATLGRAASPGMVKCVRYWPDDTEVYGDIKVTLIETEPLAEYVIRTFTVQKKGYHEIRELRLFHFTSWPDHGVPCYATGLLGFVRQVKFLNPPEAGPIVVHCSAGAGRTGCFIAIDTMLDMAENEGVVDIFNCVRELRAQRVNLVQTEEQYVFVHDAILEACLCGNTAIPVCEFRSLYYNISRLDPQTNSSQIKDEFQTLNIVTPRVRPEDCSIGLLPRNHDKNRNMDVLPLDRCLPFLISVDGESSNYINAALMDSHKQPAAFVVTQHPLPNTVADFWRLVFDYNCSSVVMLNEMDSTQLCMQYWPEKTSGCYGPIQVEFVSADIDEDIIHRIFRICNMARPQDGYRIVQHLQYIGWPAYRDTPPSKRSLLKVVRRLEKWQEQYDGREGRTVVHCLNGGGRSGTFCAICSVCEMIQQQNIIDVFHIVKTLRNNKSNMVETLEQYKFVYEVALEYLSSF