Details from NCBI annotation

Gene Symbol Ift52
Gene Name intraflagellar transport 52 homolog (Chlamydomonas), transcript variant X1
Entrez Gene ID 101716194

Database interlinks

Part of NW_004624790.1 (Scaffold)

For more information consult the page for NW_004624790.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

IFT52 ENSCPOG00000027175 (Guinea pig)

Gene Details

intraflagellar transport 52 homolog (Chlamydomonas)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000016817, Guinea pig)

Protein Percentage 94.82%
CDS Percentage 92.71%
Ka/Ks Ratio 0.12972 (Ka = 0.0302, Ks = 0.2327)

IFT52 ENSG00000101052 (Human)

Gene Details

intraflagellar transport 52 homolog (Chlamydomonas)

External Links

Gene Match (Ensembl Protein ID: ENSP00000362121, Human)

Protein Percentage 92.68%
CDS Percentage 90.77%
Ka/Ks Ratio 0.13448 (Ka = 0.0393, Ks = 0.2923)

Ift52 ENSMUSG00000017858 (Mouse)

Gene Details

intraflagellar transport 52

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000018002, Mouse)

Protein Percentage 95.29%
CDS Percentage 89.25%
Ka/Ks Ratio 0.04873 (Ka = 0.0233, Ks = 0.4772)

Ift52 ENSRNOG00000007692 (Rat)

Gene Details

intraflagellar transport protein 52 homolog

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000059169, Rat)

Protein Percentage 82.11%
CDS Percentage 81.39%
Ka/Ks Ratio 0.21495 (Ka = 0.1292, Ks = 0.601)

Genome Location

Sequence Coding sequence

Length: 1341 bp    Location: 10726269..10677894   Strand: -
>XM_004858205.1
ATGGTGGTCACTGGGCCTCAGGCAACCATGGAGAAGGATGTTCGGAGCACCATTCTTATAAATGCATACAAAAAGGAGGTATTTACCATCAACAGTGGCTATAAATCCATGCAGAAAAGGCTTCGAAGTAATTGGAAGATTCAGAGTTTAAAAGATGAAATCACATCTGAGAAGCTAATTGGGGTGAAACTGTGGATTACAGCCGGGCCAAGGGAAAAATTTACTGCGGCTGAGTTTGAAGTCCTAAAGAAGTACCTGGACAGTGGTGGAGATATCCTTGTGATGCTAGGAGAAGGTGGAGAATCCAGATTTGACACCAATATTAACTTTCTACTAGAAGAATATGGAATCATGGTTAACAATGATGCTGTGGTTAGAAATGTGTATTACAAGTATTTTCATCCTAAGGAAGCTCTGGTTTCCAATGGAGTTTTGAACAGGGAAATTAGTCGAGCTGCAGGAAAGGCTGTGCCTGGAATCATTGATGAGGAGACCAGCGGAAACAATGCCCAGGCTCTCACCTTTGTCTATCCATTCGGTGCCACATTGAGTGTCATGAAACCAGCAGTGGCTGTTCTGTCCACAGGCTCTGTCTGCTTCCCGCTTAACAGACCCATTCTGGCTTTCTATCACTCGAAGAACCAAGGTGGGAAGCTGGCAGTGCTTGGTTCATGTCACATGTTCAGTGACCAATATTTGGATAAAGAAGAAAACAGCAAAATTATGGATGTTGTTTTCCAGTGGCTCACAACAGGAGACATCCATCTGAACCAGATTGATGCTGAGGACCCAGAGATCTCTGATTACATGATGCTGCCGGACACTGCCACTCTGTCAGAGCGGTTGCGAGTATGTCTCCAGGAGGGCGATGAGAACCCGCGTGACTTCACCACCCTCTTTGACTTGTCTGTTTACCAGCTGGATACCACCTCCCTCCTCAAGGTCATCAAGGCTCATGAGCAGCTAAATGTGAAACATGAACCACTCCAGCTCATCCAGCCTCAATTTGAGATGCCGCTGCCTGCCCTTCAGCCTGCTGTTTTCCCTCCCAGCTTCAGGGAATTGCCACCTCCTCCTCTGGAACTGTTTGACTTAGATGAGACGTTTTCCTCCGAGAAGGCCCGGCTTGCTCAGATTACCAATAAGTGTACTGAAGAAGACCTGGAATTCTATGTCAGGAAGTGTGGTGACATTCTTGGAGTAACCAGTAAGCTACCAAAGGATCAACAGGATGCCAAACATATCCTTGAGCACATCTTCTTCCAAGTGGTGGAATTCAAGAAACTGAACCAGGAACATGATGTGGATACAAGTGAAATGGCATTCCAAAACAATTTCTGA

Related Sequences

XP_004858262.1 Protein

Ift52 PREDICTED: intraflagellar transport protein 52 homolog isoform X1 [Heterocephalus glaber]

Length: 446 aa      View alignments
>XP_004858262.1
MVVTGPQATMEKDVRSTILINAYKKEVFTINSGYKSMQKRLRSNWKIQSLKDEITSEKLIGVKLWITAGPREKFTAAEFEVLKKYLDSGGDILVMLGEGGESRFDTNINFLLEEYGIMVNNDAVVRNVYYKYFHPKEALVSNGVLNREISRAAGKAVPGIIDEETSGNNAQALTFVYPFGATLSVMKPAVAVLSTGSVCFPLNRPILAFYHSKNQGGKLAVLGSCHMFSDQYLDKEENSKIMDVVFQWLTTGDIHLNQIDAEDPEISDYMMLPDTATLSERLRVCLQEGDENPRDFTTLFDLSVYQLDTTSLLKVIKAHEQLNVKHEPLQLIQPQFEMPLPALQPAVFPPSFRELPPPPLELFDLDETFSSEKARLAQITNKCTEEDLEFYVRKCGDILGVTSKLPKDQQDAKHILEHIFFQVVEFKKLNQEHDVDTSEMAFQNNF