Details from NCBI annotation

Gene Symbol Hnf4a
Gene Name hepatocyte nuclear factor 4, alpha, transcript variant X1
Entrez Gene ID 101710133

Database interlinks

Part of NW_004624790.1 (Scaffold)

For more information consult the page for NW_004624790.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

HNF4A ENSCPOG00000006812 (Guinea pig)

Gene Details

hepatocyte nuclear factor 4, alpha

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006140, Guinea pig)

Protein Percentage 98.52%
CDS Percentage 94.59%
Ka/Ks Ratio 0.0221 (Ka = 0.0064, Ks = 0.2881)

HNF4A ENSG00000101076 (Human)

Gene Details

hepatocyte nuclear factor 4, alpha

External Links

Gene Match (Ensembl Protein ID: ENSP00000312987, Human)

Protein Percentage 97.89%
CDS Percentage 91.98%
Ka/Ks Ratio 0.01847 (Ka = 0.0092, Ks = 0.4959)

Hnf4a ENSMUSG00000017950 (Mouse)

Gene Details

hepatic nuclear factor 4, alpha

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000018094, Mouse)

Protein Percentage 96.41%
CDS Percentage 89.17%
Ka/Ks Ratio 0.02278 (Ka = 0.0159, Ks = 0.6966)

Hnf4a ENSRNOG00000008895 (Rat)

Gene Details

hepatocyte nuclear factor 4, alpha (Hnf4a), transcript variant 1, mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000011978, Rat)

Protein Percentage 96.62%
CDS Percentage 88.96%
Ka/Ks Ratio 0.02127 (Ka = 0.015, Ks = 0.7058)

Genome Location

Sequence Coding sequence

Length: 1425 bp    Location: 10064544..10041247   Strand: -
>XM_004858189.1
ATGCGCCTCTCCAAAACCCTGGTCGACATGGACATGGCCGACTACAGTGCTGCGCTGGACCCGGCCTACACCACCCTGGAATTCGAGAATGTTCAGGTGTTGGCGATGGGCAATGATACATCCCCATCAGAAGGTGCCAACCTCAACGCACCCAATAGCCTGGGTGTCAGTGCCCTGTGTGCCATCTGTGGGGACCGGGCCACAGGCAAGCACTATGGTGCCTCGAGCTGTGACGGCTGCAAAGGCTTCTTCCGGAGGAGTGTGAGGAAAAACCACATGTACTCCTGCAGATTCAGCAGGCAGTGTGTGGTAGACAAAGACAAGAGGAACCAGTGCCGCTACTGCAGGCTCAAGAAGTGCTTCCGGGCTGGCATGAAGAAGGAAGCTGTCCAGAATGAGCGGGACCGAATCAGCACACGGAGGTCCAGCTATGAGGACAGCAGCCTGCCCTCCATCAACGCGCTGCTGCAGGCAGAGGTCCTGTCCCAGCAGATTACCTCCCCTGTCTCTGGAATCAATGGTGACATTCGGGCTAAGAAGATTGCTAACATCGCAGACGTGTGTGAGTCCATGAAGGAGCAGCTGCTGGTATTGGTCGAGTGGGCCAAGTACATCCCAGCTTTCTGTGAGCTCCCCCTGGACGACCAGGTGGCCCTGCTCAGAGCCCACGCTGGCGAGCACCTACTGCTGGGAGCCACCAAGCGATCCATGGTGTTCAAGGACGTCCTGCTCCTGGGGAATGACTACATTGTGCCCCGGCACTGCCCAGAACTGGCGGAGATGAGCCGAGTGTCCATTCGCATCCTCGATGAGCTGGTGCTGCCCTTTCAGGAGCTGCAGATCGATGACAATGAGTATGCCTGTCTCAAAGCCATCATCTTCTTTGACCCAGATGCCAAGGGGCTGAGTGACCCAAGCAAGATCAAGCGTCTGCGCTCGCAGGTCCAGGTGAGCTTGGAGGACTACATCAATGACCGCCAGTATGATTCACGCGGCCGCTTTGGCGAGCTGCTGCTGCTGCTGCCCACGCTACAGAGCATCACCTGGCAGATGATCGAGCAGATACAATTCATCAAACTCTTCGGCATGGCCAAGATCGACAACTTGCTGCAGGAGATGCTGCTGGGAGGGTCCTCCAGTGATGCACCTCATGCTCACCACCCGCTGCACCCTCACCTGATGCAGGAACACATGGGCACCAATGTCATTGTTGCCAACACAATGCCCACTCACCTCAGCAACGGACAGATGTGTGAGTGGCCCCGACCCAGGGGGCAGGCAGCCACCCCTGAGACGCCACAACCCTCACCGCCAGGTGGCTCGGGGTCTGAGCCCTACAAGCTCCTGCCAGGAGCCATCGCCACAATCGTCAAGCCCCCCTCTGCCACACCCCAGCCGACCATTACCAAGCAAGAAGTCATCTAG

Related Sequences

XP_004858246.1 Protein

Hnf4a PREDICTED: hepatocyte nuclear factor 4-alpha isoform X1 [Heterocephalus glaber]

Length: 474 aa      View alignments
>XP_004858246.1
MRLSKTLVDMDMADYSAALDPAYTTLEFENVQVLAMGNDTSPSEGANLNAPNSLGVSALCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNERDRISTRRSSYEDSSLPSINALLQAEVLSQQITSPVSGINGDIRAKKIANIADVCESMKEQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLGNDYIVPRHCPELAEMSRVSIRILDELVLPFQELQIDDNEYACLKAIIFFDPDAKGLSDPSKIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKIDNLLQEMLLGGSSSDAPHAHHPLHPHLMQEHMGTNVIVANTMPTHLSNGQMCEWPRPRGQAATPETPQPSPPGGSGSEPYKLLPGAIATIVKPPSATPQPTITKQEVI