Details from NCBI annotation

Gene Symbol Pabpc1l
Gene Name poly(A) binding protein, cytoplasmic 1-like
Entrez Gene ID 101704744

Database interlinks

Part of NW_004624790.1 (Scaffold)

For more information consult the page for NW_004624790.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PABPC1L ENSCPOG00000013633 (Guinea pig)

Gene Details

poly(A) binding protein, cytoplasmic 1-like

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012273, Guinea pig)

Protein Percentage 94.4%
CDS Percentage 93.52%
Ka/Ks Ratio 0.13227 (Ka = 0.0283, Ks = 0.2143)

PABPC1L ENSG00000101104 (Human)

Gene Details

poly(A) binding protein, cytoplasmic 1-like

External Links

Gene Match (Ensembl Protein ID: ENSP00000255136, Human)

Protein Percentage 85.34%
CDS Percentage 86.6%
Ka/Ks Ratio 0.17623 (Ka = 0.0807, Ks = 0.4578)

Pabpc1l ENSMUSG00000054582 (Mouse)

Gene Details

poly(A) binding protein, cytoplasmic 1-like

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000096701, Mouse)

Protein Percentage 77.67%
CDS Percentage 81.06%
Ka/Ks Ratio 0.17227 (Ka = 0.1253, Ks = 0.7272)

Pabpc1l ENSRNOG00000012750 (Rat)

Gene Details

Protein Pabpc1l

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000052046, Rat)

Protein Percentage 78.33%
CDS Percentage 81.83%
Ka/Ks Ratio 0.1792 (Ka = 0.1211, Ks = 0.6755)

Genome Location

Sequence Coding sequence

Length: 1842 bp    Location: 9571097..9545782   Strand: -
>XM_004858177.1
ATGCAAGCCGGCGGCCAGGGCTACCCCCTCTCCTCGCTCTACGTGGGCGACCTGCATCCGGACGTGACCGAGGCCATGCTCTACGAGACGTTCTCTCCAGTCGGCCCCATCCTGTCCATCCGCGTGTGTCGCGACGTGGCCACTCGGCGCTCGTTGGGTTATGCCTACATCAACTTTCAGCAGCCAGCAGACGCGGAACGGGCACTGGACACAATGAACTTTGAGGTGATCAAAGGCCAACCCATCCGAATTATGTGGTCTCAGCGAGACCCAGGACTTCGAAAGTCAGGTGTGGGCAACGTCTTCATAAAGAACTTGGAGGATTCCATTGACAGCAAGGCTTTGTATGATACCTTCTCTACCTTTGGGAACATCCTCTCTTGCAAGGTGGCGTGTGATGAGCATGGCTCTCGTGGCTTCGGCTTTGTGCATTTTGAGACCAATGAGGCTGCACAACAGGCCATCAGCACCATGAATGGAATGCTGCTGAATGACCGCAAAGTTTTTGTTGGCCACTTCAAGTCTCACCGGGAACGGGAGGCAGAGCTAGGGGCTCAAGCCCTGGCGTTCACCAACATCTATGTGAAGAACCTCCACGTGGACATGGATGAGCAGGGCCTGCAGGACCTCTTCTTTGAGTTTGGAAAGATGCTGAGTGTGAAGGTGATGAGGGACAACAGTGGCCACTCCCGGGGCTTTGGCTTTGTTAACTTTGAGAAGCATGAGGAAGCCCAGAAGGCTGTGGACCACATGAACGGAAAGGAGGTGAGTGGGCAGCAGCTGTATGTGGGCCGGGCCCAGAAGCGAGGAGAGCGGCAGAATGAACTGAAGCGCAGGTTTGAGCAGATGAAGCAGGACCGGCAGACCCGCTACCAGGGTGTGAACCTGTATGTGAAGAACCTGGACGACTCCATCAGTGATGAGAAACTGAGGACAGTGTTCTCTCCCTACGGAGTGATTACCAGTGCGAAGGTGATGACAGAGGGTGGCCACAGCAAGGGATTTGGCTTTGTGTGTTTTTCCTCTCCAGAAGAGGCGACAAAGGCCGTGACAGAGATGAACGGGTGTATTGTGGGCACCAAGCCGCTGTACGTGGCACTGGCCCAGCGTAAAGAGGAACGGAAGGCCATCTTGACCAACCAGTACATGCAGCGCCTCTCCACGGTGCAGGCCTTGGGCCGCCCCGTCATGGGCTCCTTCCAGCAGCCCAACAGCTACTTCCTGCCCGCTGTGGCCCAGCCTCCAGCCCAGGCTACATGCTATGGTGGCTCTGGCTCCGTGGCCCCCGTCCAGCCTGCCCCCAGGTGGACAGCCCAGCCACAGAGAGCGTCATCTGTCTGCCCTCCAACTGCCTCAGTGGTCCGGCCACCAGGCTTGCCCCGGCGCCCCCGGGCCCATGTCAGCAGTGTCAGGCAGGCCTCTACCCAGGTGCCGTACCTGGCACCCCACACCAAGAAAGTGGCCAACATTGGTACCCAGACTATGGGAGCCAGCAGGGCATGCTCTACAGAAGGGCCATCTCTCTCAGCTGTACTTACGGCCCATGGGGTCCCGGAGCCTGCTGTGCACGTCCCTGGCCAAGAGCCCCTGACTGCGTCTATGCTGGCTGCAGCGCCGCTCCATGAGCAAAAGCAGATGATTGGGGAGCGTCTCTATCGTCTTATCCCTGAGGTTTATGCTGCGCTGGCTGGCAAGATCACAGGCATGCTGCTGGAGATCGACAATTCAGAGCTGCTGCTCATGCTAGAGTCTCCAGAGTCCCTCCAAGCTAAGGTAGAAGAGGCGGTGGCGGTACTACAGGCACACCAAGCCATGGAGCAGCCGAAGGAGTACATGCATTGA

Related Sequences

XP_004858234.1 Protein

Pabpc1l PREDICTED: polyadenylate-binding protein 1-like [Heterocephalus glaber]

Length: 613 aa      View alignments
>XP_004858234.1
MQAGGQGYPLSSLYVGDLHPDVTEAMLYETFSPVGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDTMNFEVIKGQPIRIMWSQRDPGLRKSGVGNVFIKNLEDSIDSKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETNEAAQQAISTMNGMLLNDRKVFVGHFKSHREREAELGAQALAFTNIYVKNLHVDMDEQGLQDLFFEFGKMLSVKVMRDNSGHSRGFGFVNFEKHEEAQKAVDHMNGKEVSGQQLYVGRAQKRGERQNELKRRFEQMKQDRQTRYQGVNLYVKNLDDSISDEKLRTVFSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGCIVGTKPLYVALAQRKEERKAILTNQYMQRLSTVQALGRPVMGSFQQPNSYFLPAVAQPPAQATCYGGSGSVAPVQPAPRWTAQPQRASSVCPPTASVVRPPGLPRRPRAHVSSVRQASTQVPYLAPHTKKVANIGTQTMGASRACSTEGPSLSAVLTAHGVPEPAVHVPGQEPLTASMLAAAPLHEQKQMIGERLYRLIPEVYAALAGKITGMLLEIDNSELLLMLESPESLQAKVEEAVAVLQAHQAMEQPKEYMH