Sequence details NCBI ID: XM_004858144.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Tnnc2
Gene Name troponin C type 2 (fast)
Entrez Gene ID 101724013

Database interlinks

Part of NW_004624790.1 (Scaffold)

For more information consult the page for NW_004624790.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TNNC2 ENSCPOG00000026055 (Guinea pig)

Gene Details

troponin C type 2 (fast)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000014481, Guinea pig)

Protein Percentage 98.13%
CDS Percentage 95.42%
Ka/Ks Ratio 0.03789 (Ka = 0.0104, Ks = 0.2742)

TNNC2 ENSG00000101470 (Human)

Gene Details

troponin C type 2 (fast)

External Links

Gene Match (Ensembl Protein ID: ENSP00000361636, Human)

Protein Percentage 98.75%
CDS Percentage 95.0%
Ka/Ks Ratio 0.01147 (Ka = 0.005, Ks = 0.4358)

Tnnc2 ENSMUSG00000017300 (Mouse)

Gene Details

troponin C2, fast

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000099384, Mouse)

Protein Percentage 98.75%
CDS Percentage 90.83%
Ka/Ks Ratio 0.00633 (Ka = 0.0055, Ks = 0.863)

Tnnc2 ENSRNOG00000015155 (Rat)

Gene Details

troponin C type 2 (fast) (Tnnc2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000020348, Rat)

Protein Percentage 99.38%
CDS Percentage 91.88%
Ka/Ks Ratio 0.00405 (Ka = 0.0027, Ks = 0.667)

Genome Location

Sequence Coding sequence

Length: 483 bp    Location: 8748985..8751721   Strand: +
Raw sequence   
>XM_004858144.1
ATGACGGACCAGCAGGCTGAGGCCCGGTCCTACCTCAGCGAGGAGATGATTGCTGAGTTCAAGGCTGCCTTTGACATGTTTGATGCTGATGGTGGTGGGGACATCAGCGTCAAAGAGTTGGGCACCGTGATGAGGATGCTGGGCCAGACACCCACCAAAGAGGAGCTGGATGCCATCATCGAGGAGGTGGATGAGGATGGCAGTGGCACCATCGACTTCGAGGAGTTCTTGGTCATGATGGTGCGCCAGATGAAGGAGGACGCCAAGGGGAAGAGCGAGGAGGAGCTGGCCGAGTGTTTCCGCGTTTTCGACAGGAACGCAGACGGTTACATCGACGCTGAGGAGCTGGCCGAGATTTTCAGGGCTTCTGGGGAGCACGTGACGGACGAGGAGATCGAATCCCTGATGAAAGACGGGGACAAGAACAACGACGGCCGCATTGACTTCGACGAGTTCCTGAAGATGATGGAGGGCGTGCAGTAA

Related Sequences

XP_004858201.1 Protein

Tnnc2 PREDICTED: troponin C, skeletal muscle [Heterocephalus glaber]

Length: 160 aa      View alignments
>XP_004858201.1
MTDQQAEARSYLSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRVFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKMMEGVQ