Details from NCBI annotation

Gene Symbol Ctsa
Gene Name cathepsin A, transcript variant X2
Entrez Gene ID 101720484

Database interlinks

Part of NW_004624790.1 (Scaffold)

For more information consult the page for NW_004624790.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CTSA ENSCPOG00000012819 (Guinea pig)

Gene Details

cathepsin A

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011539, Guinea pig)

Protein Percentage 87.79%
CDS Percentage 88.56%
Ka/Ks Ratio 0.18356 (Ka = 0.0701, Ks = 0.3821)

CTSA ENSG00000064601 (Human)

Gene Details

cathepsin A

External Links

Gene Match (Ensembl Protein ID: ENSP00000361562, Human)

Protein Percentage 84.84%
CDS Percentage 86.81%
Ka/Ks Ratio 0.19292 (Ka = 0.0853, Ks = 0.442)

Ctsa ENSMUSG00000017760 (Mouse)

Gene Details

cathepsin A

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000017904, Mouse)

Protein Percentage 83.97%
CDS Percentage 83.33%
Ka/Ks Ratio 0.12366 (Ka = 0.0906, Ks = 0.7324)

Ctsa ENSRNOG00000015857 (Rat)

Gene Details

cathepsin A (Ctsa), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000062425, Rat)

Protein Percentage 81.32%
CDS Percentage 81.76%
Ka/Ks Ratio 0.15721 (Ka = 0.1146, Ks = 0.7292)

Genome Location

Sequence Coding sequence

Length: 1479 bp    Location: 8692093..8686027   Strand: -
>XM_004858133.1
ATGGCCCAAGCCGCGCTGTCGCCGCTGTTCGTGCTACTGGTCGCGTCCTGGGCGGCCCGAGGTTGGGCGGCCCCTGACCAGGACGAGATCCAGTGCCTCCCCGGGCTAGCCAAACAGCCGTCTTTCCGCCAGTACTCTGGCTACCTCAGAGCCTCGGATTCCAAGCACTTCCACTACTGGTTTGTGGAGTCCCAGAAAGATCCAAAGAACAGCCCTGTGGTGCTTTGGCTCAACGGGGGTCCGGGCTGCAGCTCCCTGGATGGGTTCCTCACAGAGCATGGCCCCTTCCTGATCCAGCCAGATGGTGTCACTCTGAAGTACAACCCTTATTCTTGGAACTTGATTGCCAACATGTTGTATATCGAGTCCCCAGCTGGGGTGGGCTTCTCCTACTCTGATGACAAGGTTTATGCTACCAATGACACTGAGGTCGCCCAGAGCAATTTTGAAGCCCTTAAGGATTTCTTCCGCCTCTTTCCGGAGTATAAGAACAACAAACTTTTCCTGACTGGCGAGAGCTATGCCGGCATCTACATCCCCACCCTAGCTGTGCTGGTCATGCAGGATGACAGCATGAACCTTCAGGGGCTGGCTGTGGGCAATGGACTCTCCTCCTATGAGCAGAATGACAACTCACTGGTCTATTTTGCCTACTACCATGGCCTTCTGGGGAACAGGCTCTGGTCTTTGCTCCAGGCCCACTGCTGCTCTCAAAACAAGTGTAACTTCTATGACAACAAAGACCCAGAATGTGTGACAAATCTTCAGGAAGTGTCCCACATTGTGAGCAACTCTGGCCTCAACATCTACAACCTCTACGCCCCGTGTGCGGGGGGTGTGCCTGGCCATCTTAGGTATGAGAAGGACACTATCGTGGTCCAGGATTTCGGCAACATCTTCACTTGTCTGCCACTCAAGCGGACACAGCATCAGGCCCTGCTGCGTTCTGGGAACAAAGTACGCCTGGACCCCCCCTGCACCAACACCACAGCTCCCTCCACCTACCTCAACGACCCATACGTGCGGAAGGCCCTCCACATCCCTGAGCAGCTGCCCCCTTGGAACATGTGCAACTTCCTGGTCAATTTACAATATCGCCGTCTCTACCAAAATATGAACTCACAGTACCTGAAGCTGCTCAACTCACAGAAATACCAGATCCTGATATACAATGGAGACGTGGACATGGCCTGCAATTTCTTGGGGGATGAGTGGTTTGTGGATTCCCTCAACCAGAAGACGGAGGTGCAGCGGCGGCCCTGGCTAGTGGACTATGGGGACAGCGGGGAGCAGGTTGCTGGCTTCGTGAAGGAGTTCTCCTACATTGACTTCCTCACCATTAAGGTAGGGCCTGGGCCATGCCCTCCGGGTCACCACTGGGTTTTCAGTGAGGGAAGGAACGATGAAGGAAGTAATGGTGGGACCAGATTCTCACAAAGCTCTGCTTCCCCAGGGTGCTGGACACATGGTCCCCACTGA

Related Sequences

XP_004858190.1 Protein

Ctsa PREDICTED: lysosomal protective protein isoform X2 [Heterocephalus glaber]

Length: 492 aa      View alignments
>XP_004858190.1
MAQAALSPLFVLLVASWAARGWAAPDQDEIQCLPGLAKQPSFRQYSGYLRASDSKHFHYWFVESQKDPKNSPVVLWLNGGPGCSSLDGFLTEHGPFLIQPDGVTLKYNPYSWNLIANMLYIESPAGVGFSYSDDKVYATNDTEVAQSNFEALKDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDDSMNLQGLAVGNGLSSYEQNDNSLVYFAYYHGLLGNRLWSLLQAHCCSQNKCNFYDNKDPECVTNLQEVSHIVSNSGLNIYNLYAPCAGGVPGHLRYEKDTIVVQDFGNIFTCLPLKRTQHQALLRSGNKVRLDPPCTNTTAPSTYLNDPYVRKALHIPEQLPPWNMCNFLVNLQYRRLYQNMNSQYLKLLNSQKYQILIYNGDVDMACNFLGDEWFVDSLNQKTEVQRRPWLVDYGDSGEQVAGFVKEFSYIDFLTIKVGPGPCPPGHHWVFSEGRNDEGSNGGTRFSQSSASPGCWTHGPH