Details from NCBI annotation

Gene Symbol Stau1
Gene Name staufen double-stranded RNA binding protein 1, transcript variant X2
Entrez Gene ID 101704614

Database interlinks

Part of NW_004624790.1 (Scaffold)

For more information consult the page for NW_004624790.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

STAU1 ENSCPOG00000005566 (Guinea pig)

Gene Details

staufen double-stranded RNA binding protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005013, Guinea pig)

Protein Percentage 98.07%
CDS Percentage 95.08%
Ka/Ks Ratio 0.05106 (Ka = 0.0091, Ks = 0.1775)

STAU1 ENSG00000124214 (Human)

Gene Details

staufen double-stranded RNA binding protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000360922, Human)

Protein Percentage 96.88%
CDS Percentage 93.3%
Ka/Ks Ratio 0.0633 (Ka = 0.0151, Ks = 0.2381)

Stau1 ENSMUSG00000039536 (Mouse)

Gene Details

staufen (RNA binding protein) homolog 1 (Drosophila)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000104861, Mouse)

Protein Percentage 91.41%
CDS Percentage 85.55%
Ka/Ks Ratio 0.07103 (Ka = 0.0454, Ks = 0.6395)

Stau1 ENSRNOG00000007781 (Rat)

Gene Details

staufen double-stranded RNA binding protein 1 (Stau1), transcript variant 1, mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000010633, Rat)

Protein Percentage 92.02%
CDS Percentage 86.03%
Ka/Ks Ratio 0.0665 (Ka = 0.0415, Ks = 0.6235)

Genome Location

Sequence Coding sequence

Length: 1734 bp    Location: 6173079..6229670   Strand: +
>XM_004858079.1
ATGTCTCAAGTTCAAGTGCAAGTTCAGAACCCATCTGCTGCTCTCTCAGGGAGCCAAATACTGAACAAGAACCAATCTCTTCTCTCACAGCCTTTGATGAGTATTCCTTCTACTGCTAGTTCTCTGCCCTCTGAAAATGCAGGTAGACCTATTCAAAACTCTGCTTTACCCTCTGCATCTATTACATCTGCCAGTGCAGCTGCAGAAAGCATAACTCCTACCATTGAGCTAAATGCACTGTGCGTGAAACTTGGAAAAAAACCAATGTATAAGCCTGTTGATCCCTACTCTCGGATGCAGTCCACCTATAACTACAACATGAGAGGAGGTGCTTACCCACCGAGGTATTTTTACCCATTTCCAGTTCCACCTTTACTTTATCAAGTTGAACTTTCTGTGGGAGGACAGCAATTTAATGGGAAAGGAAAGACGAGACAGGCTGCGAAACATGATGCTGCTGCTAAAGCCTTGAGGATCCTGCAGAATGAGCCCCCGCCAGAGAGGCTGGAGATGAATGGAAGAGAATCAGAAGAAGAAAATCTCAATAAATCTGAAATAAGTCAAGTGTTTGAAATTGCACTTAAGCGGAACTTGCCTGTGAATTTCGAGGTGGCCCGGGAGAGCGGCCCACCCCACATGAAGAACTTTGTGACCAGGGTTTCGGTTGGGGAGTTTATAGGGGAAGGGGAAGGGAAGAGCAAAAAGATTTCCAAGAAGAACGCCGCTATTGCTGTTCTTGAGGAGTTGAAGAAGCTGCCACCTTTGCCTGCAGTCGAGCGAGTGAAGCCACGAATAAAAAAGAAAACCAAACCTACAGGCAAGTTACAGACAAGCCCAGAATATGGCCAAGGGATGAATCCGATTAGCAGACTGGCCCAGATCCAGCAGGCCAAAAAGGAGAAGGAACCAGAGTACATTCTCCTCACAGAGCGAGGCCTCCCACGCCGCAGGGAGTTCGTGATGCAGGTGAAGGTCGGAAACCACACTGCAGAAGGAACGGGCACCAACAAGAAGGTGGCCAAACGCAACGCAGCTGAAAACATGCTGGAGATCCTTGGTTTCAAAGTTCCTCAAGCTCAGCCCACCAAACCAGCACTCAAGTCAGAGGAGAAGACACCAGTAAAGAAACCAGGGGATGGAAGAAAAGTAACCTTTTTTGAACCTGGTTCTGGGGATGAAAATGGGACTAGTCATAAAGAGGATGAATTTAGGATGCCTTATCTTAGTCATCAGCAGCTGCCTGCTGGAATTCTTCCCATGGTGCCTGAGGTTGCCCAGGCTGTAGGAGTCAGTCAAGGACACCATACCAAAGATTTCTCCAGAGCGGCTCCAAATCCTGCTAAGGCTACAGTAACTGCCATGATAGCCCGAGAATTGTTGTATGGGGGCACTTCGCCCACAGCGGAGACCATTTTAAAGAATAACATCTCTTCGGGCCACGTACCCCATGGACCTCTCACAAGACCCTCTGAGCAGCTGGACTATCTCTCCACTGTCCAGGGATTCCAGGTTGAATACAAAGACTTCCCCAAAAACAACAAGAACGAATTTGTATCTCTTATAAATTGCTCCTCTCAGCCACCTCTGATCAGCCACGGTATTGGCAAGGATGTGGAGTCCTGCCATGATATGGCTGCGCTGAATATTTTAAAATTGCTGTCAGAGTTGGACCAACAAAGTACAGAGATGCCAAGAACCGGAAATGGACCAGTGTCTGTGTGTGGGAGGTGCTGA

Related Sequences

XP_004858136.1 Protein

Stau1 PREDICTED: double-stranded RNA-binding protein Staufen homolog 1 isoform X2 [Heterocephalus glaber]

Length: 577 aa      View alignments
>XP_004858136.1
MSQVQVQVQNPSAALSGSQILNKNQSLLSQPLMSIPSTASSLPSENAGRPIQNSALPSASITSASAAAESITPTIELNALCVKLGKKPMYKPVDPYSRMQSTYNYNMRGGAYPPRYFYPFPVPPLLYQVELSVGGQQFNGKGKTRQAAKHDAAAKALRILQNEPPPERLEMNGRESEEENLNKSEISQVFEIALKRNLPVNFEVARESGPPHMKNFVTRVSVGEFIGEGEGKSKKISKKNAAIAVLEELKKLPPLPAVERVKPRIKKKTKPTGKLQTSPEYGQGMNPISRLAQIQQAKKEKEPEYILLTERGLPRRREFVMQVKVGNHTAEGTGTNKKVAKRNAAENMLEILGFKVPQAQPTKPALKSEEKTPVKKPGDGRKVTFFEPGSGDENGTSHKEDEFRMPYLSHQQLPAGILPMVPEVAQAVGVSQGHHTKDFSRAAPNPAKATVTAMIARELLYGGTSPTAETILKNNISSGHVPHGPLTRPSEQLDYLSTVQGFQVEYKDFPKNNKNEFVSLINCSSQPPLISHGIGKDVESCHDMAALNILKLLSELDQQSTEMPRTGNGPVSVCGRC