Sequence details NCBI ID: XM_004858064.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Snai1
Gene Name snail family zinc finger 1
Entrez Gene ID 101699876

Database interlinks

Part of NW_004624790.1 (Scaffold)

For more information consult the page for NW_004624790.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SNAI1 ENSCPOG00000026663 (Guinea pig)

Gene Details

snail family zinc finger 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000017729, Guinea pig)

Protein Percentage 95.08%
CDS Percentage 92.68%
Ka/Ks Ratio 0.04631 (Ka = 0.0205, Ks = 0.4432)

SNAI1 ENSG00000124216 (Human)

Gene Details

snail family zinc finger 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000244050, Human)

Protein Percentage 92.05%
CDS Percentage 88.26%
Ka/Ks Ratio 0.06143 (Ka = 0.0405, Ks = 0.6596)

Snai1 ENSMUSG00000042821 (Mouse)

Gene Details

snail homolog 1 (Drosophila)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000050581, Mouse)

Protein Percentage 88.26%
CDS Percentage 83.33%
Ka/Ks Ratio 0.04074 (Ka = 0.0605, Ks = 1.484)

Snai1 ENSRNOG00000009594 (Rat)

Gene Details

snail family zinc finger 1 (Snai1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000012939, Rat)

Protein Percentage 89.77%
CDS Percentage 84.47%
Ka/Ks Ratio 0.04114 (Ka = 0.0516, Ks = 1.2543)

Genome Location

Sequence Coding sequence

Length: 795 bp    Location: 5515189..5509543   Strand: -
Raw sequence   
>XM_004858064.1
ATGCCGCGCTCTTTCCTAGTAAGGAAGCCCTCTGACCCCAACCGCAAGCCAAACTACAGCGAGCTGCAAGATTCCTCTCCGGAGTTTACCTTCCAGCAGCCCTACGACCAGGCCCACCTGCTGGCAGCCATCCCGCCCCCGGAGGTCCTCAACCCCACGGCCTCTCTGCCTACACTCATCTGGGATTCTGTCCTGGCGCCTCTGGCCCAACCCCTCGGCTGGGCCTCGCTTCAGCCCCAGGAGAGCCCCAGGGCGGCTGAGCTGACCTCCCTGTCTGACGAGGACAGTGGGAAGGGCTCCCAGCCCCCCAGCCCACCCTCGCCAGCTCCTTCGTCCTTCTCCTCCACCTCCACCTCTTCCCTGGAGGCGGAGGCCTACGCTGCTTTCCCAGGCTTGGGCCAACTGCCCAAGCAGCTGGCTCGGCTCTCTGTGGCCAAGGACCTCCAGTCTCGAAAGGCTTTCAACTGCAAATACTGCAACAAGGAATACCTCAGCCTGGGCGCCCTTAAGATGCACATCCGGAGCCACACGCTGCCCTGCGTCTGCGCCACCTGTGGGAAGGCCTTCTCCCGGCCCTGGCTGCTACAGGGCCACGTCCGGACCCACACCGGTGAGAAGCCCTTCTCCTGCTCCCACTGTAGCCGTGCCTTCGCCGATCGCTCCAACCTACGTGCTCACCTGCAGACCCACTCAGACGTGAAGAAGTACCAGTGCAAGATGTGCTCCCGCACCTTCTCCCGCATGTCCCTGCTCCACAAACACCAAGAGTCCGGCTGCTTGGGGGGGCCCCGCTGA

Related Sequences

XP_004858121.1 Protein

Snai1 PREDICTED: zinc finger protein SNAI1 [Heterocephalus glaber]

Length: 264 aa      View alignments
>XP_004858121.1
MPRSFLVRKPSDPNRKPNYSELQDSSPEFTFQQPYDQAHLLAAIPPPEVLNPTASLPTLIWDSVLAPLAQPLGWASLQPQESPRAAELTSLSDEDSGKGSQPPSPPSPAPSSFSSTSTSSLEAEAYAAFPGLGQLPKQLARLSVAKDLQSRKAFNCKYCNKEYLSLGALKMHIRSHTLPCVCATCGKAFSRPWLLQGHVRTHTGEKPFSCSHCSRAFADRSNLRAHLQTHSDVKKYQCKMCSRTFSRMSLLHKHQESGCLGGPR