Sequence details NCBI ID: XM_004858059.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Cebpb
Gene Name CCAAT/enhancer binding protein (C/EBP), beta
Entrez Gene ID 101698039

This gene is present in the GenAge database and has been identified as potentially important to ageing in humans.

Database interlinks

Part of NW_004624790.1 (Scaffold)

For more information consult the page for NW_004624790.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CEBPB ENSCPOG00000000811 (Guinea pig)

Gene Details

CCAAT/enhancer binding protein (C/EBP), beta

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000017331, Guinea pig)

Protein Percentage 98.25%
CDS Percentage 97.51%
Ka/Ks Ratio 0.01976 (Ka = 0.0063, Ks = 0.3211)

CEBPB ENSG00000172216 (Human)

Gene Details

CCAAT/enhancer binding protein (C/EBP), beta

External Links

Gene Match (Ensembl Protein ID: ENSP00000305422, Human)

Protein Percentage 97.08%
CDS Percentage 97.56%
Ka/Ks Ratio 0.08537 (Ka = 0.0113, Ks = 0.1328)

Cebpb ENSMUSG00000056501 (Mouse)

Gene Details

CCAAT/enhancer binding protein (C/EBP), beta

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000069850, Mouse)

Protein Percentage 82.77%
CDS Percentage 86.15%
Ka/Ks Ratio 0.10165 (Ka = 0.0878, Ks = 0.8633)

Cebpb ENSRNOG00000049393 (Rat)

Gene Details

CCAAT/enhancer binding protein (C/EBP), beta (Cebpb), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000065222, Rat)

Protein Percentage 82.09%
CDS Percentage 85.25%
Ka/Ks Ratio 0.09178 (Ka = 0.0914, Ks = 0.9958)

Genome Location

Sequence Coding sequence

Length: 1029 bp    Location: 5369605..5367810   Strand: -
Raw sequence   
>XM_004858059.1
ATGCAACGCCTGGTGGCCTGGGACCCAGCATGTCTCCCCCTGCCGCCGCCGCCGCCCGCCTTTAAATCCATGGAAGTGGCCAACTTCTACTACGAGGCGGACTGCTTGGCTGCTGCGTACGGCGGCAAGGCGGCCCCCGCGGCGCCCCCCGCGGCCAGACCTGGGCCGCGCGCCCCCGCCGGCGAGCTGGGCAGCATCGGCGACCACGAGCGCGCCATCGACTTCAGCCCGTACCTGGAGCCGCTGGGCGCGCCGCAGGCCCCGGCGCCGGCCACGGCCACGGACACCTTCGAGGCGGCTCCGCCCGTGCCCGCCCCCGCGCCCGCCTCCTCCGGGCAGCACCACGACTTCCTCTCCGATCTCTTCTCCGACGACTACGGGGGCAAGAACTGCAAGAAGGCGGCCGAGTACGGCTACGTGAGCCTGGGGCGCCTGGGGACCGCCAAGGGCCCGCTGCACCCCGGCTGCTTCGCGCCTCTGCACCCGCCGCCCCCGCCGCCCGCCGAGCTCAAGGCGGAGCCGGGCTTCGAGCCCGCGGACTGCAAGCGGAAGGAGGAGGCCGGGGCGCCGGGCGGCGGCGCAGGCATGGCGGCGGGCTTCCCGTACGCGCTGCGCGCCTACCTCGGCTACCAGTCGGTGCCGAGCGGCAGCAGCGGGAGCCTCTCCACGTCCTCGTCGTCCAGCCCGCCCGGCACGCCGAGCCCGGCCGACGCCAAGGCGCCCACTGCCGCCTGCTACCCTGGGGCCGCGCCGGCGCCCGCGCAGGTCAAGAGCAAGGCCAAGAAGACGGTGGACAAGCACAGCGACGAGTACAAGATCCGGCGCGAGCGCAACAACATCGCCGTGCGCAAGAGCCGCGACAAGGCCAAGATGCGCAACCTGGAGACGCAGCACAAAGTCCTGGAGCTCACGGCCGAGAACGAGCGGCTCCAGAAGAAGGTGGAGCAGCTGTCGCGCGAGCTCAGCACCCTGCGGAACTTGTTCAAGCAGCTGCCCGAGCCCCTGCTCGCCTCCTCCGGCCACTGCTAG

Related Sequences

XP_004858116.1 Protein

Cebpb PREDICTED: CCAAT/enhancer-binding protein beta [Heterocephalus glaber]

Length: 342 aa      View alignments
>XP_004858116.1
MQRLVAWDPACLPLPPPPPAFKSMEVANFYYEADCLAAAYGGKAAPAAPPAARPGPRAPAGELGSIGDHERAIDFSPYLEPLGAPQAPAPATATDTFEAAPPVPAPAPASSGQHHDFLSDLFSDDYGGKNCKKAAEYGYVSLGRLGTAKGPLHPGCFAPLHPPPPPPAELKAEPGFEPADCKRKEEAGAPGGGAGMAAGFPYALRAYLGYQSVPSGSSGSLSTSSSSSPPGTPSPADAKAPTAACYPGAAPAPAQVKSKAKKTVDKHSDEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVEQLSRELSTLRNLFKQLPEPLLASSGHC