Sequence details NCBI ID: XM_004858041.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Atp9a
Gene Name ATPase, class II, type 9A, transcript variant X1
Entrez Gene ID 101721413

Database interlinks

Part of NW_004624790.1 (Scaffold)

For more information consult the page for NW_004624790.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ATP9A ENSCPOG00000012747 (Guinea pig)

Gene Details

ATPase, class II, type 9A

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011470, Guinea pig)

Protein Percentage 98.73%
CDS Percentage 93.0%
Ka/Ks Ratio 0.01097 (Ka = 0.005, Ks = 0.4558)

ATP9A ENSG00000054793 (Human)

Gene Details

ATPase, class II, type 9A

External Links

Gene Match (Ensembl Protein ID: ENSP00000342481, Human)

Protein Percentage 98.25%
CDS Percentage 90.29%
Ka/Ks Ratio 0.01418 (Ka = 0.0087, Ks = 0.6145)

Atp9a ENSMUSG00000027546 (Mouse)

Gene Details

ATPase, class II, type 9A

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000029060, Mouse)

Protein Percentage 97.18%
CDS Percentage 87.86%
Ka/Ks Ratio 0.01345 (Ka = 0.0133, Ks = 0.9856)

Atp9a ENSRNOG00000049484 (Rat)

Gene Details

ATPase, class II, type 9A

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000064988, Rat)

Protein Percentage 93.1%
CDS Percentage 85.03%
Ka/Ks Ratio 0.03443 (Ka = 0.0412, Ks = 1.1969)

Genome Location

Sequence Coding sequence

Length: 3093 bp    Location: 4197945..4328920   Strand: +
Raw sequence   
>XM_004858041.1
ATGTGTCATGGACCCAGGTGCTGTGAGTGGCTGCGATGCTGTGGTGGAGGGGAGCCCAGACCTCGCACTGTCTGGCTGGGACACCCGGAGAAGAGGGACCAGAGGTACCCTCGAAATGTCATCAACAACCAGAAGTACAATTTCTTCACCTTTCTTCCCGGGGTGCTGTTCAACCAGTTCAAGTACTTCTTCAACCTCTATTTCTTACTTCTCGCCTGTTCCCAGTTTGTCCCTGAGATGCGGCTTGGCGCCCTCTATACCTACTGGGTTCCGCTGGGCTTCGTGCTAGCTGTCACCGTCATCCGTGAGGCGGTGGAGGAGATCCGATGCTACGTGCGGGACAAGGAAGTCAACTCGCAGGTCTACAGCCGGCTCACAGCAAGAGGGACAGTGAAAGTGAAGAGTTCCAGCATCCAGGTGGGCGATCTCATCATTGTTGAGAAGAACCAGCGGGTCCCCGCCGACGTGATCTTCCTGAGGACATCAGAAAAAAATGGCTCTTGCTTCTTGCGGACAGACCAGCTGGACGGGGAGACAGACTGGAAGCTGCGGCTGCCTGTGGCCTGCACACAGCGGCTCCCCACGGCCTCCGACCTTCTCCAGATTCGTGCCTATGTGTACGCAGAGGAGCCGAACATCGACATTCACAACTTTGTAGGAACTTTCACCAGGGAGGACAGCGACCCTCCCATCAGCGAGAGCCTGAGTGTAGAGAACACGCTGTGGGCTGGCACTGTGATTGCGTCAGGCACTGTTGTGGGTGTCGTTCTTTACACCGGCAGAGAACTCCGGAGCGTCATGAATACTTCCAACCCCCGAAGCAAGATCGGCCTGTTTGACCTGGAGGTGAACTGCCTCACCAAGATCCTCTTTGGCGCTCTGGTGGTGGTGTCACTGGTCATGGTCGCCCTCCAGCACTTTGCTGGCCGCTGGTACCTACAGATCATCCGCTTCCTCCTCTTGTTTTCCAACATCATTCCCATCAGTCTGCGTGTCAACCTGGACATGGGCAAGATCGTGTACAGCTGGGTGATTCGGAGGGATTCGAAGATCCCCGGGACTGTGGTTCGGTCCAGCACGATTCCCGAGCAGCTGGGCAGGATTTCGTACTTACTCACAGACAAGACAGGAACTCTGACCCAGAACGAGATGGTTTTCAAACGGCTACACCTGGGCACAGTGGCCTATGGCCTCGACTCCATGGATGAAGTACAGAGCCACATATTCAGTATTTACACCCAGCAGTCCCAGGAGCCCCCAGCTCAGAAGGGACCCACGGTTACCACCAAGGTCCGGCGGACCATGAGCAGCCGCGTGCACGAAGCCGTGAAGGCCATCGCGCTGTGCCACAATGTGACTCCCGTGTACGAGTCCAACAGTGTGACGGACCAGGCCGAGGCCGAGAAGCAGTACGAGGACTCCTGTCGCGTGTACCAGGCGTCGAGCCCAGACGAGGTGGCCCTGGTCCAGTGGACAGAGAGCGTGGGCCTCACCCTGGTGGGCCGAGACCAGTCTTCTGTGCAGCTGAGGACCCCTGGTGACCAGATCTTGAACTTCACCATCCTGCAGATCTTCCCTTTCACCTACGAAAGCAAGCGCATGGGCATCATCGTGCGGGACGAATCCACTGGAGAAATCACATTTTACATGAAGGGGGCTGATGTCGTCATGGCTGGCATTGTGCAGTACAACGACTGGCTGGAGGAGGAGTGTGGCAACATGGCCCGGGAAGGGCTGCGGGTGCTCGTGGTGGCCAAGAAGTCCCTGGCGGAAGAGCAGTACCAAGACTTTGAGGCCCGCTATGTCCAAGCCAAGCTGAGCGTGCACGACCGCTCCCTCAAAGTGGCCACGGTGATCGAGAGCCTGGAGATGGAAATGGAGCTGCTGTGCCTGACAGGCGTGGAGGACCAGCTCCAAGCTGACGTGCGGCCCACGCTGGAGACCCTGAGGAACGCGGGCATCAAGGTCTGGATGCTGACGGGAGACAAGCTGGAGACAGCCACGTGCACGGCCAAGAATGCACATCTGGTGACCAGAAACCAGGACATCCACGTATTCCGGCTGGTGACTAACCGCGGCGAGGCCCACCTTGAGCTGAACGCCTTCCGCAGGAAGCATGACTGCGCCCTGGTCATCTCTGGGGACTCCCTGGAGGTGTGCCTCAAATACTACGAGTATGAGTTCATGGAGCTGGCCTGCCAGTGCCCAGCCGTGGTCTGCTGCCGCTGCGCCCCCACCCAGAAGGCCCAGATAGTGCGCCTACTCCAAGAACGTACCGGAAAGCTCACCTGTGCAGTAGGTGATGGAGGCAATGACGTCAGCATGATCCAGGAGGCGGACTGTGGCGTGGGAGTGGAAGGCAAGGAAGGAAAACAAGCTTCGCTGGCCGCAGACTTCTCTGTCACTCAGTTTAAGCATCTCGGCCGGTTGCTCATGGTGCATGGCCGGAACAGTTACAAGCGCTCAGCTGCTCTCAGCCAGTTTGTGATCCACAGGAGCCTCTGCATCAGCACCATGCAGGCTGTCTTCTCCTCCGTGTTCTACTTCGCCTCTGTTCCTCTCTACCAGGGATTCCTCATCATTGGGTACTCCACAGTTTACACCATGTTCCCCGTGTTCTCGCTGGTCCTGGACAAGGACGTCAAGTCGGAAGTGGCCATGCTGTACCCGGAGCTCTACAAAGACCTGCTCAAGGGACGACCGTTGTCCTACAAGACGTTCTTAATCTGGGTTTTGATTAGCATCTATCAAGGGAGCACCATCATGTATGGGGCACTGCTGCTGTTTGAGTCGGAGTTCGTGCACATCGTGGCCATCTCCTTCACGTCGCTGATCCTCACCGAGCTGCTCATGGTGGCACTGACCATCCAGACCTGGCACTGGCTCATGACGGTGGCCGAGCTGCTCAGCCTGGCCTGCTACATCGCCTCCCTGGTGTTCCTACATGAGTTCATTGATGTGTACTTCATCGCCACCCTGTCGTTCCTCTGGAAAGTCTCTGTCATCACTCTGGTCAGCTGTCTCCCCCTCTACGTCCTCAAGTACCTGCGAAGACGATTCTCCCCCCCTAGCTACTCGAAGCTCACATCGTAG

Related Sequences

XP_004858098.1 Protein

Atp9a PREDICTED: probable phospholipid-transporting ATPase IIA isoform X1 [Heterocephalus glaber]

Length: 1030 aa      View alignments
>XP_004858098.1
MCHGPRCCEWLRCCGGGEPRPRTVWLGHPEKRDQRYPRNVINNQKYNFFTFLPGVLFNQFKYFFNLYFLLLACSQFVPEMRLGALYTYWVPLGFVLAVTVIREAVEEIRCYVRDKEVNSQVYSRLTARGTVKVKSSSIQVGDLIIVEKNQRVPADVIFLRTSEKNGSCFLRTDQLDGETDWKLRLPVACTQRLPTASDLLQIRAYVYAEEPNIDIHNFVGTFTREDSDPPISESLSVENTLWAGTVIASGTVVGVVLYTGRELRSVMNTSNPRSKIGLFDLEVNCLTKILFGALVVVSLVMVALQHFAGRWYLQIIRFLLLFSNIIPISLRVNLDMGKIVYSWVIRRDSKIPGTVVRSSTIPEQLGRISYLLTDKTGTLTQNEMVFKRLHLGTVAYGLDSMDEVQSHIFSIYTQQSQEPPAQKGPTVTTKVRRTMSSRVHEAVKAIALCHNVTPVYESNSVTDQAEAEKQYEDSCRVYQASSPDEVALVQWTESVGLTLVGRDQSSVQLRTPGDQILNFTILQIFPFTYESKRMGIIVRDESTGEITFYMKGADVVMAGIVQYNDWLEEECGNMAREGLRVLVVAKKSLAEEQYQDFEARYVQAKLSVHDRSLKVATVIESLEMEMELLCLTGVEDQLQADVRPTLETLRNAGIKVWMLTGDKLETATCTAKNAHLVTRNQDIHVFRLVTNRGEAHLELNAFRRKHDCALVISGDSLEVCLKYYEYEFMELACQCPAVVCCRCAPTQKAQIVRLLQERTGKLTCAVGDGGNDVSMIQEADCGVGVEGKEGKQASLAADFSVTQFKHLGRLLMVHGRNSYKRSAALSQFVIHRSLCISTMQAVFSSVFYFASVPLYQGFLIIGYSTVYTMFPVFSLVLDKDVKSEVAMLYPELYKDLLKGRPLSYKTFLIWVLISIYQGSTIMYGALLLFESEFVHIVAISFTSLILTELLMVALTIQTWHWLMTVAELLSLACYIASLVFLHEFIDVYFIATLSFLWKVSVITLVSCLPLYVLKYLRRRFSPPSYSKLTS