Sequence details NCBI ID: XM_004858026.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Pfdn4
Gene Name prefoldin subunit 4, transcript variant X5
Entrez Gene ID 101715033

Database interlinks

Part of NW_004624790.1 (Scaffold)

For more information consult the page for NW_004624790.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PFDN4 ENSCPOG00000012478 (Guinea pig)

Gene Details

prefoldin subunit 4

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011228, Guinea pig)

Protein Percentage 91.79%
CDS Percentage 90.3%
Ka/Ks Ratio 0.14408 (Ka = 0.0525, Ks = 0.3643)

PFDN4 ENSG00000101132 (Human)

Gene Details

prefoldin subunit 4

External Links

Gene Match (Ensembl Protein ID: ENSP00000360473, Human)

Protein Percentage 97.76%
CDS Percentage 93.28%
Ka/Ks Ratio 0.03305 (Ka = 0.0106, Ks = 0.3203)

Pfdn4 ENSMUSG00000052033 (Mouse)

Gene Details

prefoldin 4

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000070596, Mouse)

Protein Percentage 94.78%
CDS Percentage 87.56%
Ka/Ks Ratio 0.02739 (Ka = 0.0228, Ks = 0.8317)

Genome Location

Sequence Coding sequence

Length: 405 bp    Location: 2162643..2151588   Strand: -
Raw sequence   
>XM_004858026.1
ATGGCGGCCACCATGAAGAAGGCGGCTGCAGAAGATGTCAATGTTACTTTCGAAGATCAACAAAAAATAAATAAATTTGCGCGGAATACGAGTAGAATCACAGAGCTAAAGGAAGAAATAGAAGTAAAAAAGAAACAACTGCAGAATTTAGAAGATGCTTGTGACGACATCATGCTCGCAGATGATGACAGCTTAATGATACCTTACCAGATTGGTGACATTTTCATTAGCCATTCTCAAGAAGAAACACAAGACATGTTAGAGGAAGCAAAGAAAAATTTGCAAGAAGAAATTGATGCCTTAGAATCCAGAGTAGAATCAATTCAGCGGGTGTTAGCAGATTTGAAAGTTCAGTTATATGCAAAATTTGGCAGCAACATAAACCTTGAAGCTGATGAAAGTTAA

Related Sequences

XP_004858083.1 Protein

Pfdn4 PREDICTED: prefoldin subunit 4 isoform X5 [Heterocephalus glaber]

Length: 134 aa      
>XP_004858083.1
MAATMKKAAAEDVNVTFEDQQKINKFARNTSRITELKEEIEVKKKQLQNLEDACDDIMLADDDSLMIPYQIGDIFISHSQEETQDMLEEAKKNLQEEIDALESRVESIQRVLADLKVQLYAKFGSNINLEADES