Details from NCBI annotation

Gene Symbol Cstf1
Gene Name cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa, transcript variant X2
Entrez Gene ID 101711727

Database interlinks

Part of NW_004624790.1 (Scaffold)

For more information consult the page for NW_004624790.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CSTF1 ENSCPOG00000004957 (Guinea pig)

Gene Details

cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004461, Guinea pig)

Protein Percentage 99.77%
CDS Percentage 89.33%
Ka/Ks Ratio 0.0016 (Ka = 0.001, Ks = 0.6471)

CSTF1 ENSG00000101138 (Human)

Gene Details

cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa

External Links

Gene Match (Ensembl Protein ID: ENSP00000217109, Human)

Protein Percentage 99.54%
CDS Percentage 91.72%
Ka/Ks Ratio 0.00525 (Ka = 0.0021, Ks = 0.4067)

Cstf1 ENSMUSG00000027498 (Mouse)

Gene Details

cleavage stimulation factor, 3' pre-RNA, subunit 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000112076, Mouse)

Protein Percentage 99.54%
CDS Percentage 87.63%
Ka/Ks Ratio 0.00261 (Ka = 0.0021, Ks = 0.8028)

Cstf1 ENSRNOG00000004775 (Rat)

Gene Details

cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa (Cstf1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000051976, Rat)

Protein Percentage 99.54%
CDS Percentage 87.47%
Ka/Ks Ratio 0.00251 (Ka = 0.0021, Ks = 0.8266)

Genome Location

Sequence Coding sequence

Length: 1296 bp    Location: 143771..132363   Strand: -
>XM_004858016.1
ATGTACAGAACCAGAGTGGGCTTGAAGGACCGACAGCAGCTCTACAAGCTGATCATTAGCCAGCTGCTCTACGATGGCTATATCAGCATTGCCAATGGCCTCATCAATGAAATCAAACCCCAGTCTGTCTGTGCACCTTCAGAGCAGCTCCTGCATCTCATCAAACTAGGAATGGAAAATGATGACACTGCAGTTCAGTATGCAATTGGTCGTTCAGATACAGTTGCCCCTGGCACAGGGATTGACTTGGAATTTGATGCAGATGTCCAGACCATGTCCCCAGAGGCTTCTGAGTATGAAACATGCTATGTCACATCCCATAAAGGACCCTGTCGCGTCGCCACGTACAGCAGAGATGGGCAGTTAATAGCCACAGGGTCTGCTGATGCTTCTATAAAGATCCTCGACACAGAAAGAATGTTGGCCAAAAGTGCCATGCCAATAGAGGTCATGATGAATGAGACTGCACAGCAGAACATGGAAAACCATCCAGTGATCCGAACTCTTTACGACCATGTCGATGAAGTCACGTGTCTCGCTTTCCACCCAACAGAACAGATCCTGGCCTCTGGTTCAAGGGATTATACTCTTAAATTGTTTGATTATTCCAAACCATCTGCAAAAAGAGCCTTCAAATACATTCAGGAAGCAGAAATGTTACGCTCCATCTCCTTTCACCCTTCTGGAGACTTTATACTTGTTGGGACTCAGCACCCTACGCTACGCCTTTATGATATCAACACCTTTCAGTGTTTCGTCTCTTGCAATCCTCAAGACCAGCACACCGATGCTATATGTTCTGTTAATTACAATCCCAGTGCCAACATGTATGTAACTGGTAGCAAGGACGGCTGCATCAAATTATGGGATGGTGTTTCAAATCGATGCATCACAACTTTTGAAAAAGCACATGATGGTGCTGAAGTCTGTTCTGCCATTTTTTCCAAAAATTCTAAATACATTCTGTCAAGCGGAAAAGACTCTGTAGCTAAACTTTGGGAGATATCAACGGGACGAACACTGGTCAGATACACAGGTGCAGGTCTGAGTGGACGGCAGGTGCACCGGACACAGGCTGTCTTTAACCACACCGAGGACTATGTGCTGCTGCCTGATGAGAGGACAATCAGCCTCTGCTGCTGGGACTCGAGGACAGCGGAGCGCAGAAACCTCCTCTCCCTGGGCCACAACAACATCGTGCGCTGCATCGTGCACTCACCCACCAACCCTGGCTTTATGACGTGCAGTGATGACTTCAGAGCGCGGTTTTGGTACCGAAGATCAACCACGGACTGA

Related Sequences

XP_004858073.1 Protein

Cstf1 PREDICTED: cleavage stimulation factor subunit 1 isoform X2 [Heterocephalus glaber]

Length: 431 aa      View alignments
>XP_004858073.1
MYRTRVGLKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMENDDTAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPTLRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSANMYVTGSKDGCIKLWDGVSNRCITTFEKAHDGAEVCSAIFSKNSKYILSSGKDSVAKLWEISTGRTLVRYTGAGLSGRQVHRTQAVFNHTEDYVLLPDERTISLCCWDSRTAERRNLLSLGHNNIVRCIVHSPTNPGFMTCSDDFRARFWYRRSTTD