Sequence details NCBI ID: XM_004858014.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Cass4
Gene Name Cas scaffolding protein family member 4, transcript variant X2
Entrez Gene ID 101711096

Database interlinks

Part of NW_004624790.1 (Scaffold)

For more information consult the page for NW_004624790.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CASS4 ENSCPOG00000026525 (Guinea pig)

Gene Details

Cas scaffolding protein family member 4

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000019439, Guinea pig)

Protein Percentage 73.7%
CDS Percentage 80.82%
Ka/Ks Ratio 0.343 (Ka = 0.165, Ks = 0.481)

CASS4 ENSG00000087589 (Human)

Gene Details

Cas scaffolding protein family member 4

External Links

Gene Match (Ensembl Protein ID: ENSP00000360387, Human)

Protein Percentage 69.78%
CDS Percentage 78.32%
Ka/Ks Ratio 0.37912 (Ka = 0.1957, Ks = 0.5161)

Cass4 ENSMUSG00000074570 (Mouse)

Gene Details

Cas scaffolding protein family member 4

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000104764, Mouse)

Protein Percentage 64.91%
CDS Percentage 74.03%
Ka/Ks Ratio 0.31487 (Ka = 0.2349, Ks = 0.746)

Cass4 ENSRNOG00000021560 (Rat)

Gene Details

Cas scaffolding protein family member 4 (Cass4), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000037343, Rat)

Protein Percentage 64.3%
CDS Percentage 72.66%
Ka/Ks Ratio 0.27263 (Ka = 0.2398, Ks = 0.8796)

Genome Location

Sequence Coding sequence

Length: 2349 bp    Location: 112894..70646   Strand: -
Raw sequence   
>XM_004858014.1
ATGAGGGGAACCGGCTCCAGGGACGGTGTGCCCAAGACACTCCTGGCCAGAGCACTTTACAACAACCGCCCTGACTGCTCCGACGAGCTGGCTTTCTCCAGGGGGGACATCCTGACCATTCTGGAGCAAAACGTGCCAGAAAGTGAGGGCTGGTGGAAGTGTCTGCTTCATGGCAAGCAAGGCCTGGCCCCAGCCAACCGCCTCCAGATCCTCACAGAGGCCTCTGAAGACGGATCCTGCCCTGCTCTCAGCTGTCCTCCCACCAGCGAGGAGGAGACCTACCAGGTGCCCACCATGCTGCGCTCCTTACCGCCAGGGCCCGTGTATGAGCCGATGAAGAGCTGGGTGGAGGGGTCCCCACCTCCCACTGCCCAAGTCTACGAATTCCCTGATCCACCTTCCAGAGCCAGAATCGTCTGTGAAAAGACTCTAAGCTTTCCAAATCAGGCCCTCTTCGAGCTTCCCAGACCTTCGAGGGCCTCGGCGCCAGCCCTGCTCTCCCAGGTGTACGATGTGCCTGCCCACAGCCAGCCCTCCTTGGCCTTTAATGAGCCAGCGAAGCACCAGTTATATGATATACCAACTAGCCCCCACAAGGCAGCCTTCCAGCTCCCACCCAAACAAGCAAGTGGCCAGAGCGTTCCCCCGACACCAGCGCTGGACTTCAGAAGAGGTGGTTACAAGACATTGCCAACCCCTCAGAAATCAGGATGGATTTATGACACACCAGTGCCTCTGGCAAAGGCCACTGTCAGAAATGCATCTCCAACCGGCTTCACAGAAGAGTCAAAGCCAAATGCTGTCCCCAGTTCGGCAGCCACTGCCCTCAGTCCCCAGGGCAGCAGAGACTGGGTCCTCCATCCGCAGCTGTGTGACAATGTGCCCAGGCAGAAAAAGCTCAGCCTTCCTGAAATCCCTTCCTCTTCCTTCCCAGCACCCAATAACACAGTCCCTTCAGATGCAGGCATCAGCTACAAGGTGCCTTCAAGCTTTCTGATTCCCCGAGTGGAGCAGCAGAACACCAAGCCTAATATTTACGACATCCCTAAAGCAAGCTCAAGTGCATCTCAGGCTGAGAAAGAGTTTCAAAAAGCCAAGGAGGCTCCAGAGAATTCCACGGGCCTCAATTCCTGCCCATTCTCAAGATACACAACCACTCTGTCTCCTGAGCTGGACAGATTGTCTCTTTCCAGCTCCGACAGCAGAGCCAGTGTTCTTTCTTCATGCTCCTCTACATCCACTGACTCCTCCTTCAGCTCCTCCTCCTCAGAGTCAGCCAAGGAGCTCTGTCTGGATGTGGACTCAGCCAAAGACATGGCAATGGCCCTGCAGCACAAGGTGGTCAGCTCTGCAGCTGGCCTACTGCTGTTTGTGAGTAGGAACTGGAGGCTCCGAGACTCCCTGGAGGTCCATATCCATGCGATCCACAGGGCCGCAGACCACATAGCAGAGTCCCTGAGACAATTCCTGGATTTTGCCCAGGGAGTTCGTGGGATCACCTGCAACCTCAGTAACAGTCACCTTCAGGCCAGAATTCAGGATCAGCTACAGACAATCTCCAACTCCTACCAGAGCCTGCTGGAAGCAAAGGAATGCCTGGACAGCTGCAAGTGGTCTCTCGACGTTCTTTTGGTGGACAAAGTCCAAAACAGCATGGATGACCTTGAGAGGCTTGTCATGGTTGCACAGACGGTTCCTGAAGATGTCAAGAGGTTTGTCTCCATTGTCATCGCTAACGGGAGGCTCCTTTTTAAGCAGAACTGTGAAAAAGAAGATACAGTACAGTTGCCCCCAAATGCAGAATTCAAATGTGCGAAATGTGTCCAGCTTCCTCAAAGAGAAACGGAATCCTACCAAAAGAACACTCCTTCTAATAAACAGTGGGGAAATGAACACTCCCCTAAACTAGCAGAGAAAAACAGGACAGCTGTCTGTGAACAGAATCCCAGCTTGCTACCCCAGCCCTGGAGCGGGCCGGCCCCCGAGAGGAAAGTCCCCCTTTCTGAGCACTGCCGGCTGTACTTCGGAGCACTCTTCAAAGCCGTGCGCGTGTTCCACGGCAGCCTCAGCGCCGGCCAGCCGCCCGAGGTCTTCATCACGCAGAGCAAGCTGGTCATCACGGTGGGGCAGAAGCTGGTGGACACGCTGTGCAAGGAGACCCGGGAGAGGGACGTGCGCAACGAGATCCTCCGCAGCAGCGGCCGCCTGTGCGGGCTGCTCAAGTCCCTGGCGCTGGCCACCAAGGATGCGGTGCTCAAGTACCCGAGCCCTGAGGCCCTGGGGCTGCTCCAGGCCGAGGCTGAGAAGCTGGAGCATCATGCGAGGCAGTTCAGAGAGATGTTGGAATGA

Related Sequences

XP_004858071.1 Protein

Cass4 PREDICTED: cas scaffolding protein family member 4 isoform X2 [Heterocephalus glaber]

Length: 782 aa      View alignments
>XP_004858071.1
MRGTGSRDGVPKTLLARALYNNRPDCSDELAFSRGDILTILEQNVPESEGWWKCLLHGKQGLAPANRLQILTEASEDGSCPALSCPPTSEEETYQVPTMLRSLPPGPVYEPMKSWVEGSPPPTAQVYEFPDPPSRARIVCEKTLSFPNQALFELPRPSRASAPALLSQVYDVPAHSQPSLAFNEPAKHQLYDIPTSPHKAAFQLPPKQASGQSVPPTPALDFRRGGYKTLPTPQKSGWIYDTPVPLAKATVRNASPTGFTEESKPNAVPSSAATALSPQGSRDWVLHPQLCDNVPRQKKLSLPEIPSSSFPAPNNTVPSDAGISYKVPSSFLIPRVEQQNTKPNIYDIPKASSSASQAEKEFQKAKEAPENSTGLNSCPFSRYTTTLSPELDRLSLSSSDSRASVLSSCSSTSTDSSFSSSSSESAKELCLDVDSAKDMAMALQHKVVSSAAGLLLFVSRNWRLRDSLEVHIHAIHRAADHIAESLRQFLDFAQGVRGITCNLSNSHLQARIQDQLQTISNSYQSLLEAKECLDSCKWSLDVLLVDKVQNSMDDLERLVMVAQTVPEDVKRFVSIVIANGRLLFKQNCEKEDTVQLPPNAEFKCAKCVQLPQRETESYQKNTPSNKQWGNEHSPKLAEKNRTAVCEQNPSLLPQPWSGPAPERKVPLSEHCRLYFGALFKAVRVFHGSLSAGQPPEVFITQSKLVITVGQKLVDTLCKETRERDVRNEILRSSGRLCGLLKSLALATKDAVLKYPSPEALGLLQAEAEKLEHHARQFREMLE