Details from NCBI annotation

Gene Symbol Pcnp
Gene Name PEST proteolytic signal containing nuclear protein, transcript variant X1
Entrez Gene ID 101721054

Database interlinks

Part of NW_004624789.1 (Scaffold)

For more information consult the page for NW_004624789.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PCNP ENSCPOG00000010610 (Guinea pig)

Gene Details

PEST proteolytic signal containing nuclear protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009527, Guinea pig)

Protein Percentage 98.31%
CDS Percentage 98.31%
Ka/Ks Ratio 0.15892 (Ka = 0.0075, Ks = 0.0473)

PCNP ENSG00000081154 (Human)

Gene Details

PEST proteolytic signal containing nuclear protein

External Links

Gene Match (Ensembl Protein ID: ENSP00000265260, Human)

Protein Percentage 98.31%
CDS Percentage 97.38%
Ka/Ks Ratio 0.09234 (Ka = 0.0077, Ks = 0.0838)

Pcnp ENSMUSG00000071533 (Mouse)

Gene Details

PEST proteolytic signal containing nuclear protein

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000110087, Mouse)

Protein Percentage 96.07%
CDS Percentage 92.7%
Ka/Ks Ratio 0.0637 (Ka = 0.0183, Ks = 0.2873)

Pcnp ENSRNOG00000028411 (Rat)

Gene Details

PEST proteolytic signal containing nuclear protein (Pcnp), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000039022, Rat)

Protein Percentage 86.52%
CDS Percentage 85.77%
Ka/Ks Ratio 0.17779 (Ka = 0.0874, Ks = 0.4915)

Genome Location

Sequence Coding sequence

Length: 537 bp    Location: 15429792..15448422   Strand: +
>XM_004857989.1
ATGGCGGACGGAAAGGCGGGAGAGGAGAAGCCTGAGAAGCCGAAGCGAGCTGGAGCCGCCGGAGGACCTGAAGAAGAAGCAGAAAAACCTGTGAAAACTAAGACTGTTTCTTCCAGTAATGGAGGGGAAAGTTCCAGTCGCAGCGCTGAAAAGCGATCAGCTGAAGAAGAAGCTGCAGACCTCCCAACAAAGCCTACAAAGATCTCCAAGTTTGGATTTGCCATAGGTAGTCAGACAACAAAGAAAGCATCAGCTATATCCATCAAACTTGGATCAAGTAAGCCTAAAGAAACTGTTCCAACTCTTGCTCCAAAAACCCTTTCAGTAGCAGCAGCTTTTAATGAAGATGAAGATAGTGAACCAGAGGAAATGCCTCCAGAAGCAAAGATGAGGATGAAGAATATTGGAAGGGATACACCAACATCAGCTGGACCAAACTCTTTCAATAAAGGAAAGCATGGGTTTTCTGATAACCAGAAGCTATGGGAACGAAATATAAAATCTCACCTTGGAAATGTCCATGACCAAGACAATTAA

Related Sequences

XP_004858046.1 Protein

Pcnp PREDICTED: PEST proteolytic signal-containing nuclear protein isoform X1 [Heterocephalus glaber]

Length: 178 aa      View alignments
>XP_004858046.1
MADGKAGEEKPEKPKRAGAAGGPEEEAEKPVKTKTVSSSNGGESSSRSAEKRSAEEEAADLPTKPTKISKFGFAIGSQTTKKASAISIKLGSSKPKETVPTLAPKTLSVAAAFNEDEDSEPEEMPPEAKMRMKNIGRDTPTSAGPNSFNKGKHGFSDNQKLWERNIKSHLGNVHDQDN