Details from NCBI annotation

Gene Symbol Cggbp1
Gene Name CGG triplet repeat binding protein 1, transcript variant X3
Entrez Gene ID 101719300

Database interlinks

Part of NW_004624789.1 (Scaffold)

For more information consult the page for NW_004624789.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CGGBP1 ENSCPOG00000027232 (Guinea pig)

Gene Details

CGG triplet repeat binding protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000015440, Guinea pig)

Protein Percentage 100.0%
CDS Percentage 97.21%
Ka/Ks Ratio 0.001 (Ka = 0.0001, Ks = 0.1106)

CGGBP1 ENSG00000163320 (Human)

Gene Details

CGG triplet repeat binding protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000381429, Human)

Protein Percentage 99.4%
CDS Percentage 96.81%
Ka/Ks Ratio 0.01954 (Ka = 0.0027, Ks = 0.1358)

Cggbp1 ENSMUSG00000054604 (Mouse)

Gene Details

CGG triplet repeat binding protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000065845, Mouse)

Protein Percentage 97.6%
CDS Percentage 91.62%
Ka/Ks Ratio 0.02675 (Ka = 0.0107, Ks = 0.3998)

Cggbp1 ENSRNOG00000000718 (Rat)

Gene Details

CGG triplet repeat binding protein 1 (Cggbp1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000000909, Rat)

Protein Percentage 99.4%
CDS Percentage 91.82%
Ka/Ks Ratio 0.00681 (Ka = 0.0027, Ks = 0.3999)

Genome Location

Sequence Coding sequence

Length: 504 bp    Location: 4448694..4443389   Strand: -
>XM_004857912.1
ATGGAACGATTTGTAGTAACAGCACCACCTGCTCGAAACCGTTCTAAGACTGCTTTGTATGTGACTCCCCTGGATCGAGTCACTGAGTTTGGAGGTGAGCTTCATGAAGATGGAGGAAAACTCTTCTGTACTTCTTGCAATGTGGTTCTGAATCATGTTCGCAAGTCTGCCATTAGTGACCACCTCAAGTCAAAGACTCATACCAAGAGGAAGGCAGAATTTGAAGAGCAGAATGTGAGAAAGAAGCAGAGGCCTCTAACTGCATCTCTTCAGTGCAACAGTACTGCGCAAACAGAAAAAGTCAGTGTTATCCAGGACTTTGTGAAAATGTGCCTGGAAGCCAACATCCCCCTTGAGAAGGCTGATCACCCAGCAGTCCGTGCTTTCCTGACTCGCCATGTGAAGAATGGAGGCTCCATACCTAAGTCAGACCAACTAAGGAGAGCTTATCTGCCTGACGGATATGAGAATGAGAATCAGCTCCTCAACTCACAGGATTGTTGA

Related Sequences

XP_004857969.1 Protein

Cggbp1 PREDICTED: CGG triplet repeat-binding protein 1 isoform X3 [Heterocephalus glaber]

Length: 167 aa      View alignments
>XP_004857969.1
MERFVVTAPPARNRSKTALYVTPLDRVTEFGGELHEDGGKLFCTSCNVVLNHVRKSAISDHLKSKTHTKRKAEFEEQNVRKKQRPLTASLQCNSTAQTEKVSVIQDFVKMCLEANIPLEKADHPAVRAFLTRHVKNGGSIPKSDQLRRAYLPDGYENENQLLNSQDC