Details from NCBI annotation

Gene Symbol Rarb
Gene Name retinoic acid receptor, beta, transcript variant X2
Entrez Gene ID 101724485

Database interlinks

Part of NW_004624788.1 (Scaffold)

For more information consult the page for NW_004624788.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

NRARS ENSCPOG00000015410 (Guinea pig)

Gene Details

Cavia porcellus retinoic acid receptor, beta (Rarb), mRNA.

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013894, Guinea pig)

Protein Percentage 99.02%
CDS Percentage 95.93%
Ka/Ks Ratio 0.05791 (Ka = 0.0089, Ks = 0.1535)

RARB ENSG00000077092 (Human)

Gene Details

retinoic acid receptor, beta

External Links

Gene Match (Ensembl Protein ID: ENSP00000332296, Human)

Protein Percentage 99.33%
CDS Percentage 95.46%
Ka/Ks Ratio 0.01874 (Ka = 0.0032, Ks = 0.1706)

Rarb ENSMUSG00000017491 (Mouse)

Gene Details

retinoic acid receptor, beta

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000067694, Mouse)

Protein Percentage 98.44%
CDS Percentage 91.15%
Ka/Ks Ratio 0.02036 (Ka = 0.0083, Ks = 0.4081)

Rarb ENSRNOG00000024061 (Rat)

Gene Details

retinoic acid receptor, beta (Rarb), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000036260, Rat)

Protein Percentage 89.29%
CDS Percentage 84.23%
Ka/Ks Ratio 0.11342 (Ka = 0.074, Ks = 0.6522)

Genome Location

Sequence Coding sequence

Length: 1347 bp    Location: 3330624..3493140   Strand: +
>XM_004857787.1
ATGTTTGACTGTATGGATGTTCTGTCAGTGAGTCCTGGGCAAATCCTGGATTTCTACACTGCGAGCCCGTCTTCCTGCATGCTCCAGGAGAAAGCTCTCAAAGCATGCTTCAGTGGATTGACCCAAAGCGAATGGCAGCATCGGCACACTGCTCAATCGATTGAAACACAGAGCACCAGCTCTGAGGAGCTCGTGCCAAGCCCACCGTCTCCACTGCCTCCCCCACGAGTGTACAAGCCCTGCTTCGTGTGCCAGGACAAATCATCAGGATACCACTATGGGGTCAGTGCCTGTGAGGGATGTAAGGGCTTTTTCCGCAGAAGTATTCAGAAGAACATGATTTATACTTGTCATCGAGATAAGAATTGTGTTATTAATAAAGTCACCAGGAATCGATGCCAGTACTGTCGACTCCAGAAGTGCTTTGAAGTGGGAATGTCCAAAGAATCTGTCAGGAATGACAGGAACAAGAAAAAGAAGGAGCCTTCGAAGCAGGAATGCACAGAGAGCTATGAGATGACAGCTGAGCTGGACGATCTCACAGAGAAGATCCGGAAGGCTCACCAGGAAACCTTCCCCTCACTCTGCCAGCTGGGTAAATACACCACGAATTCCAGCGCTGACCATCGAGTCCGACTGGACCTGGGCCTCTGGGACAAGTTCAGCGAACTGGCCACCAAGTGCATTATTAAGATTGTGGAGTTTGCTAAACGTCTGCCAGGCTTCACCAGCTTGACCATCGCAGACCAGATCACCCTGCTGAAGGCCGCCTGCCTGGACATCCTGATTCTTAGAATTTGCACCAGATATACCCCAGAACAAGACACCATGACTTTTTCAGATGGCCTTACCCTAAATCGAACTCAGATGCACAATGCTGGATTTGGTCCTCTGACTGATCTTGTATTCACCTTTGCCAACCAGCTCCTGCCTTTGGAAATGGATGACACAGAAACAGGCCTTCTCAGTGCCATCTGCTTAATCTGTGGAGACCGTCAGGACCTTGAGGAACCAACAAAAGTAGATAAGCTACAAGAACCACTGCTGGAAGCACTAAAAATTTATATCAGAAAGAGGCGACCCAGCAAGCCTCATATGTTTCCAAAGATATTAATGAAAATCACAGATCTCCGCAGCATCAGTGCTAAAGGTGCGGAACGAGTAATTACCTTGAAAATGGAAATTCCTGGATCAATGCCACCTCTCATTCAGGAGATGCTGGAGAATTCTGAAGGACATGAACCTTTGACTCCAAGTTCAAGTGGGAACACAGCAGAGCACAGTCCCAGCATCTCGCCTAGCTCAGTGGAAAACAGTGGAGTCAGTCAGTCACCACTGGTGCAATAA

Related Sequences

XP_004857844.1 Protein

Rarb PREDICTED: retinoic acid receptor beta isoform X2 [Heterocephalus glaber]

Length: 448 aa      View alignments
>XP_004857844.1
MFDCMDVLSVSPGQILDFYTASPSSCMLQEKALKACFSGLTQSEWQHRHTAQSIETQSTSSEELVPSPPSPLPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMIYTCHRDKNCVINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKEPSKQECTESYEMTAELDDLTEKIRKAHQETFPSLCQLGKYTTNSSADHRVRLDLGLWDKFSELATKCIIKIVEFAKRLPGFTSLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFTFANQLLPLEMDDTETGLLSAICLICGDRQDLEEPTKVDKLQEPLLEALKIYIRKRRPSKPHMFPKILMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGHEPLTPSSSGNTAEHSPSISPSSVENSGVSQSPLVQ