Details from NCBI annotation

Gene Symbol Hoxd3
Gene Name homeobox D3, transcript variant X5
Entrez Gene ID 101722129

Database interlinks

Part of NW_004624787.1 (Scaffold)

For more information consult the page for NW_004624787.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

HOXD3 ENSCPOG00000006169 (Guinea pig)

Gene Details

homeobox D3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000018666, Guinea pig)

Protein Percentage 99.07%
CDS Percentage 96.14%
Ka/Ks Ratio 0.02599 (Ka = 0.0042, Ks = 0.1612)

HOXD3 ENSG00000128652 (Human)

Gene Details

homeobox D3

External Links

Gene Match (Ensembl Protein ID: ENSP00000424734, Human)

Protein Percentage 98.15%
CDS Percentage 92.9%
Ka/Ks Ratio 0.02857 (Ka = 0.0094, Ks = 0.3297)

Hoxd3 ENSMUSG00000079277 (Mouse)

Gene Details

homeobox D3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000051355, Mouse)

Protein Percentage 96.06%
CDS Percentage 91.51%
Ka/Ks Ratio 0.05282 (Ka = 0.0192, Ks = 0.3641)

Hoxd3 ENSRNOG00000001577 (Rat)

Gene Details

homeobox D3

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000034938, Rat)

Protein Percentage 96.99%
CDS Percentage 91.59%
Ka/Ks Ratio 0.03736 (Ka = 0.0148, Ks = 0.3948)

Genome Location

Sequence Coding sequence

Length: 1299 bp    Location: 13300967..13314623   Strand: +
>XM_004857728.1
ATGTTATTTGAGCAGGGTCAGCAAGCCCTGGAACTTCCTGAATGCACAATGCAGAAGGCTGCATACTATGAAAACCCAGGACTCTTCGGAGGCTATAGCTACAGCAAAGCCACTGACACTTATGGCTATGGTACCCCCCATCAGCCCTACCCACCCCCTGCTGCCGCCAACTCCCTGGACACTGATTACCCAGGTTCTGCCTGCTCCATCCAGAGCTCTGCACCTCTGCGAGCCCCAGCCCACAAGGGGGCTGAACTCAATGGCAGTTGCATGAGACCTGGCACTGGGAACAGCCAGGGTGGGGGTGGTGGCAGCCAGCCTCCTGGTCTGAACTCAGAGCAGCAGCCACCACAACCCCCCCCTCCACCACCCACTCTGCCCCCATCCTCACCTACCAATCCTGGAGGTGGAGTGCCTGCCAAGAAGGTCAAGGGTGGGCCCAATGCTTCCAACTCCTCAGCCACCATCAGCAAGCAGATCTTCCCCTGGATGAAAGAGTCCCGACAGAACTCCAAGCAGAAGAACAGCTGTGCCACTGCAGGAGAGAGCTGCGAGGACAAGAGCCCGCCAGGCCCGGCGTCCAAGCGGGTGCGCACGGCCTACACCAGTGCGCAGCTGGTGGAGTTGGAAAAGGAATTCCACTTCAACCGCTACTTGTGCCGGCCGCGCCGGGTGGAGATGGCCAACCTGCTGAATCTCACCGAGCGCCAGATCAAGATCTGGTTCCAGAACAGGCGCATGAAGTACAAGAAGGACCAGAAGGCCAAGGGCATCCTGCACTCGCCGGCCGGCCAGTCTCCGGAGCGCAGCCCGCCACTCGGCGGCGCCGCTGGCCACGTGGCCTACTCTGGGCAGCTGCCGCCGGTGCCAGGCCTGGCCTACGACGCACCCTCGCCGCCGGCTTTCGCCAAATCGCAGCCCAATATGTACGGCCTGGCCGCCTACACGGCGCCGCTCAGCAGCTGCCTCCCACAGCAGAAGCGCTACGCGGCGCCCGAGTTCGAGCCCCACCCCATGGCAAGCAACGGCGGCGGCTTCGCCAGCGCCAACCTGCAGGGCAGCCCTGTGTATGTGGGTGGCAACTTCGTCGACTCCATGGCGCCCGCCTCCGGGCCCGTCTTCAACCTGGGCCACCTCTCGCACCCATCTTCGGCTAGCGTGGACTACAGTTGCGCTGCGCAAATTCCTGGCAACCATCACCACGGACCGTGCGACCCTCATCCCACCTACACAGATCTTTCGGCTCACCACTCCTCTCAGGGACGCCTGCCCGAGGCCCCCAAACTGACACATCTGTAG

Related Sequences

XP_004857785.1 Protein

Hoxd3 PREDICTED: homeobox protein Hox-D3 isoform X5 [Heterocephalus glaber]

Length: 432 aa      View alignments
>XP_004857785.1
MLFEQGQQALELPECTMQKAAYYENPGLFGGYSYSKATDTYGYGTPHQPYPPPAAANSLDTDYPGSACSIQSSAPLRAPAHKGAELNGSCMRPGTGNSQGGGGGSQPPGLNSEQQPPQPPPPPPTLPPSSPTNPGGGVPAKKVKGGPNASNSSATISKQIFPWMKESRQNSKQKNSCATAGESCEDKSPPGPASKRVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKGILHSPAGQSPERSPPLGGAAGHVAYSGQLPPVPGLAYDAPSPPAFAKSQPNMYGLAAYTAPLSSCLPQQKRYAAPEFEPHPMASNGGGFASANLQGSPVYVGGNFVDSMAPASGPVFNLGHLSHPSSASVDYSCAAQIPGNHHHGPCDPHPTYTDLSAHHSSQGRLPEAPKLTHL