Sequence details NCBI ID: XM_004857721.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Hoxd9
Gene Name homeobox D9
Entrez Gene ID 101721176

Database interlinks

Part of NW_004624787.1 (Scaffold)

For more information consult the page for NW_004624787.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

HOXD9 ENSCPOG00000015006 (Guinea pig)

Gene Details

homeobox D9

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013524, Guinea pig)

Protein Percentage 97.94%
CDS Percentage 95.97%
Ka/Ks Ratio 0.05231 (Ka = 0.0092, Ks = 0.1751)

HOXD9 ENSG00000128709 (Human)

Gene Details

homeobox D9

External Links

Gene Match (Ensembl Protein ID: ENSP00000249499, Human)

Protein Percentage 91.12%
CDS Percentage 92.41%
Ka/Ks Ratio 0.15619 (Ka = 0.0403, Ks = 0.258)

Hoxd9 ENSMUSG00000043342 (Mouse)

Gene Details

homeobox D9

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000058490, Mouse)

Protein Percentage 91.96%
CDS Percentage 90.97%
Ka/Ks Ratio 0.10598 (Ka = 0.0394, Ks = 0.3714)

Genome Location

Sequence Coding sequence

Length: 1020 bp    Location: 13250056..13265531   Strand: +
Raw sequence   
>XM_004857721.1
ATGTCCTCCAGTGGCACCCTCAGTAACTACTACGTGGACTCGCTCATAGGCCATGAGGGCGACGAGGTTTTCGCCGCGCGCTTCGGGCCGCCGGGACCAGGCGCTCAGGGCCGGCCTGCAGGTGTGGCCGATGGCCCGGCCGCCGCCGCCGAGTTCACCTCGTGTAGTTTTGCCCCCAAATCGGCCGTGTTCTCCGCCTCGTGGTCCGCGGTGCCCGCCCAGCCCCCGGCGGCGGCGGCGATGAGCGGCCTTTACCACCCGTACGTGCCCCCGCCGCCCCTGGCTGCCGCCGCCTCCGAGCCCGGCCGCTACGTGCGCTCCTGGATGGAGCCGCTGCCCGGCTTCCCCGGTGGTGCGAGCGGCGGCGGCGGTGGAGGAGGAGGCGGTGGCCCGGGCCCCGGTCCCAGCCCCGGCCCCGGAGGCCCAGCCAACGGGCGCCACTATGGGATTAAGCCTGAAACCGGAGCGGCCCCGGCCCCCGCCGCAGCCTCCACCTCCTCCTCTACTTCCTCGTCCTCCTCCTCCAAACGGACTGAGTGCTCAGCGGCCCGGGAGTCCCAGGGGAGCGGCGGCACCGAGTTCTCGTGCAACTCGTTCCTGCGGGACAAGGCGACCGCGACGGCGGGGGGAACCGGGCCCCGGGCAGCGATCCGGGCCGGGCCTGGTGCAGGCGGCTCCTCGGAGCCCTCGGCTTGCAGCGATCACCCGAGCCCCGGCTGCCCGCTGAAGGAGGAGGAGAAGCAGCATCCGCAGGCTCCGCAGCAGCAACTTGACCCAAACAACCCCGCAGCGAACTGGATCCACGCTCGTTCCACCCGGAAAAAGCGCTGTCCCTACACCAAATACCAGACGCTTGAGCTGGAGAAGGAATTTCTCTTCAACATGTACCTCACCCGGGACCGGCGCTACGAGGTGGCCAGGATTCTGAACCTCACAGAGAGACAGGTCAAAATATGGTTCCAGAACCGTAGGATGAAAATGAAAAAGATGAGCAAGGAGAAATGCCCAAAAGGAGACTGA

Related Sequences

XP_004857778.1 Protein

Hoxd9 PREDICTED: homeobox protein Hox-D9 [Heterocephalus glaber]

Length: 339 aa      View alignments
>XP_004857778.1
MSSSGTLSNYYVDSLIGHEGDEVFAARFGPPGPGAQGRPAGVADGPAAAAEFTSCSFAPKSAVFSASWSAVPAQPPAAAAMSGLYHPYVPPPPLAAAASEPGRYVRSWMEPLPGFPGGASGGGGGGGGGGPGPGPSPGPGGPANGRHYGIKPETGAAPAPAAASTSSSTSSSSSSKRTECSAARESQGSGGTEFSCNSFLRDKATATAGGTGPRAAIRAGPGAGGSSEPSACSDHPSPGCPLKEEEKQHPQAPQQQLDPNNPAANWIHARSTRKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARILNLTERQVKIWFQNRRMKMKKMSKEKCPKGD