Sequence details NCBI ID: XM_004857710.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Atf2
Gene Name activating transcription factor 2, transcript variant X1
Entrez Gene ID 101717365

This gene is present in the GenAge database and has been identified as potentially important to ageing in humans.

Database interlinks

Part of NW_004624787.1 (Scaffold)

For more information consult the page for NW_004624787.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ATF2 ENSCPOG00000004637 (Guinea pig)

Gene Details

activating transcription factor 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004179, Guinea pig)

Protein Percentage 98.81%
CDS Percentage 96.44%
Ka/Ks Ratio 0.04431 (Ka = 0.0056, Ks = 0.1272)

ATF2 ENSG00000115966 (Human)

Gene Details

activating transcription factor 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000264110, Human)

Protein Percentage 98.61%
CDS Percentage 95.18%
Ka/Ks Ratio 0.03491 (Ka = 0.0065, Ks = 0.1861)

Atf2 ENSMUSG00000027104 (Mouse)

Gene Details

activating transcription factor 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000058521, Mouse)

Protein Percentage 99.18%
CDS Percentage 93.5%
Ka/Ks Ratio 0.01398 (Ka = 0.0039, Ks = 0.2777)

Atf2 ENSRNOG00000001597 (Rat)

Gene Details

activating transcription factor 2 (Atf2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000002174, Rat)

Protein Percentage 98.56%
CDS Percentage 92.74%
Ka/Ks Ratio 0.02656 (Ka = 0.0079, Ks = 0.2976)

Genome Location

Sequence Coding sequence

Length: 1518 bp    Location: 12338083..12243903   Strand: -
Raw sequence   
>XM_004857710.1
ATGAAATTCAAGTTACATGTGAAAGCTGCCGGGCAATACAAGGACCTGTGGAATATGAGTGATGACAAACCCTTTCTATGCACTGCCCCTGGATGTGGCCAGCGTTTTACCAACGAGGATCATTTGGCTGTCCATAAACATAAACATGAGATGACACTGAAATTTGGTCCAGCACGTAATGACAGTGTCATTGTGGCTGATCAGACCCCAACACCAACAAGATTCTTGAAAAACTGTGAAGAAGTGGGTTTGTTTAATGAGTTGGCAAGTCCATTTGAGAATGAATTCAAGAAGGCTTCAGAAGATGACATTAAAAAAATGCCTCTAGACTTGTCCCCTCTTGCAACACCCATCATAAGAAGCAAAATTGAGGAACCTTCTGTGGTAGAAACAACTCACCAGGATAGCCCTTTACCTCATCCAGAGTCTACTACCAGTGATGAAAAGGAGGTACCATTGGCACAAACTGCACAGCCCACATCAGCCATTGTTCGTCCAGCGTCATTGCAGGTTCCCAATGTGCTGCTCACGAGTTCTGACTCAAGTGTAATTATTCAGCAGGCACTACCTTCACCAACCTCAAGTACTGTAATCACCCAGGCACCATCGTCCAATAGACCAATTGTCCCTGTCCCAGGCCCATTTCCCCTCCTGTTACATCTTCCTAATGGACAGACCATGCCTGTTGCAATTCCTGCATCCATTACAAGTTCCAACGTGCATGTACCAGCTGCAGTCCCACTTGTTCGACCAGTCACCATGGTGCCTAGTGTTCCAGGAATCCCAGGTCCTTCTTCCCCTCAACCAGTACAGTCAGAAGCAAAAATGAGATTAAAAGCTGCTTTGACCCAGCAACATCCTCCGGTTACCAATGGTGATACTGTCAAAGGTCATGGTAGTGGATTGGTTAGAAGTCAGTCAGAAGAATCTCGCCCACAATCATTACAACAGCCAGCCACATCCACTACAGAAACTCCGGCTTCTCCAGCTCACACAACTCCACAAACCCAAAATACAAGTGGACGTAGAAGAAGAGCGGCTAATGAAGATCCTGATGAAAAAAGGAGAAAGTTTCTAGAGCGAAATAGAGCCGCAGCTTCAAGATGCCGACAAAAAAGGAAAGTTTGGGTGCAATCCTTAGAGAAGAAAGCGGAAGACTTGAGTTCATTAAATGGTCAACTGCAGAGTGAAGTCACCCTGCTGAGAAATGAAGTGGCACAGCTGAAACAGCTTCTTCTGGCTCATAAAGATTGCCCTGTAACCGCCATGCAGAAGAAATCTGGCTATCATACTGCTGATAAAGATGATAGTTCAGAAGACCTTTCGGTGCCAAGTAGTCCACATACAGAAGCTATACAGCATAGTTCTGTCAGCACATCCAATGGAGTCAGTTCAACCTCAAAGGCAGAAGCTGTGGCCACTTCAGTGCTCACCCAGATGGCAGACCAGAGTACAGAGCCTGCGCTTTCACAGATTGTCATGGCTCCTTCCTCCCAGTCACAGCCCTCAGGAAGTTGA

Related Sequences

XP_004857767.1 Protein

Atf2 PREDICTED: cyclic AMP-dependent transcription factor ATF-2 isoform X1 [Heterocephalus glaber]

Length: 505 aa      View alignments
>XP_004857767.1
MKFKLHVKAAGQYKDLWNMSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKFGPARNDSVIVADQTPTPTRFLKNCEEVGLFNELASPFENEFKKASEDDIKKMPLDLSPLATPIIRSKIEEPSVVETTHQDSPLPHPESTTSDEKEVPLAQTAQPTSAIVRPASLQVPNVLLTSSDSSVIIQQALPSPTSSTVITQAPSSNRPIVPVPGPFPLLLHLPNGQTMPVAIPASITSSNVHVPAAVPLVRPVTMVPSVPGIPGPSSPQPVQSEAKMRLKAALTQQHPPVTNGDTVKGHGSGLVRSQSEESRPQSLQQPATSTTETPASPAHTTPQTQNTSGRRRRAANEDPDEKRRKFLERNRAAASRCRQKRKVWVQSLEKKAEDLSSLNGQLQSEVTLLRNEVAQLKQLLLAHKDCPVTAMQKKSGYHTADKDDSSEDLSVPSSPHTEAIQHSSVSTSNGVSSTSKAEAVATSVLTQMADQSTEPALSQIVMAPSSQSQPSGS