Sequence details NCBI ID: XM_004857683.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Rapgef4
Gene Name Rap guanine nucleotide exchange factor (GEF) 4, transcript variant X2
Entrez Gene ID 101706913

Database interlinks

Part of NW_004624787.1 (Scaffold)

For more information consult the page for NW_004624787.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RAPGEF4 ENSCPOG00000010605 (Guinea pig)

Gene Details

Rap guanine nucleotide exchange factor (GEF) 4

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009523, Guinea pig)

Protein Percentage 99.07%
CDS Percentage 95.95%
Ka/Ks Ratio 0.02907 (Ka = 0.0044, Ks = 0.1499)

RAPGEF4 ENSG00000091428 (Human)

Gene Details

Rap guanine nucleotide exchange factor (GEF) 4

External Links

Gene Match (Ensembl Protein ID: ENSP00000380271, Human)

Protein Percentage 98.69%
CDS Percentage 94.43%
Ka/Ks Ratio 0.02854 (Ka = 0.0062, Ks = 0.2164)

Rapgef4 ENSMUSG00000049044 (Mouse)

Gene Details

Rap guanine nucleotide exchange factor (GEF) 4

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000088336, Mouse)

Protein Percentage 97.48%
CDS Percentage 91.14%
Ka/Ks Ratio 0.03264 (Ka = 0.0127, Ks = 0.3895)

Rapgef4 ENSRNOG00000001516 (Rat)

Gene Details

Rap guanine nucleotide exchange factor 4

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000010630, Rat)

Protein Percentage 97.49%
CDS Percentage 90.34%
Ka/Ks Ratio 0.02938 (Ka = 0.0126, Ks = 0.43)

Genome Location

Sequence Coding sequence

Length: 2982 bp    Location: 10062700..10369132   Strand: +
Raw sequence   
>XM_004857683.1
ATGGTCGCTGCGCACGCTGCCCATTCTTCCTCCTCCGCCGAGTGGATCGCCTGCTTGGATAAAAGACCATTGGAACGATCCAGTGAAGATGTGGATATAATCTTCACAAGACTGAAAGAAGTCAAAGCTTTTGAGAAATTTCACCCAAACCTCCTTCATCAGATTTGTTTATGCGGTTATTATGAGAACTTGGAAAAAGGAATAACATTGTTCCGCCAGGGTGACATTGGAACAAATTGGTATGCTGTCCTGGCAGGGTCTTTGGATGTCAAAGTATCGGAGACCAGCAGTCACCAGGATGCTGTGACCATCTGTACCCTGGGGATCGGGACAGCCTTTGGAGAGTCCATTCTGGACAACACACCCCGCCATGCGACCATCGTTACTAGGGAGAGCAGTGAACTGCTCCGCATTGAGCAGAAGGACTTCAAGGCACTATGGGAGAAATATCGACAGTATATGGCAGGACTTCTGGCTCCTCCTTATGGTGTTATGGAAACGGGCTCTAACAATGACAGGATTCCTGACAAGGAGAATGTTCCTTCAGAGAAGATTCTCAGAGCTGGAAAAATTTTACGGAATGCCATCCTCTCTCGAGCACCTCACATGATAAGAGACAGAAAATACCACCTAAAGACATACCGACAGTGCTGTGTGGGAACTGAGCTGGTGGACTGGATGCTGCAGCAGACCCCATGTGTTCACTCCCGGACTCAGGCTGTTGGCATGTGGCAGGTCCTGTTAGAAGATGGTGTCCTCAACCACGTGGACCAAGAGCACCATTTCCAAGACAAATATTTGTTTTATCGATTTCTGGATGATGAGCATGAGGATGCCCCTTTGCCTACTGAGGAGGAGAAGAAGGAGTGTGACGAGGAGCTCCAGGACACCATGCTGCTGCTGTCCCAGATGGGCCCCGATGCCCACATGAGGATGATCCTGCGCAAGCCACCTGGTCAGCGGACTGTGGATGACCTAGAGATTATCTATGAAGAGCTCCTTCATATCAAAGCCTTATCCCATCTTTCTACCACAGTGAAACGGGAGTTAGCAGGTGTTCTCATCTTTGAATCACATGCCAAAGGAGGAACCGTGTTGTTTAACCAGGGAGAAGAAGGTACCTCCTGGTACATTATTCTAAAAGGATCAGTGAATGTAGTCATTTATGGCAAGGGTGTGGTCTGCACCCTGCATGAGGGAGATGATTTTGGCAAGTTAGCACTAGTGAATGATGCTCCCCGGGCTGCCTCTATTGTCTTGCGAGAAGATAATTGTCATTTCTTAAGAGTCGACAAGGAAGATTTCAACCGGATCCTGAGGGATGTTGAGGCGAATACAGTCAGACTTAAAGAACATGACCAAGATGTCTTGGTGCTGGAGAAGGTCCCAGCAGGGAACAGAGCTTCTAATCAAGGAAACTCACAGCCTCAGCAAAAGTATACTGTGATGTCAGGAACACCTGAAAAAATTTTAGAGCATTTTCTAGAAACTATACGCCTTGAGCCAGCTTTAAATGAAGCAACAGATTCTGTTTTAAATGACTTCGTTATGATGCACTGTGTTTTTATGCCAAATACCCAGCTGTGCCCTGCCCTGGTGGCCCATTACCATGCCCAGCCTTCTCAAGGTACAGAACAGGAGAAATTGGATTATGGCCTCAACAATAAACGACGAGTCATCCGCCTGGTTCTTCAGTGGGCTGCCACATACGGGGACCTCCTCCAAGAGGATGATGTGGCCATGGCTTTCCTGGAGGAGTTTTATGTGTCTGTATCAGATGATGCCCGGATGATTGCTGCCTTCAAGGAGCAACTGCCAGAGTTGGAGAAGATAGTCAAGCAAATCTCAGAAGATGCAAAGGCCCCTCAAAAGAAGCACAAGGTTCTTTTGCAACAGTTCAACACGAGCGATGAGAGGGCCCAGAAGCGCCAGCCTATCCGAGGCTCTGATGAGGTTTTGTTTAAGGTCTATTGCATGGACCACACCTACACTACCATTCGGGTGCCGGTAGCTGCCTCTGTGAAGGAAGTCATCAGCGCAGTGGCCGACAAGCTGGGCTCTGGGGAAGGCCTGATCATAGTAAAGATGAGCTCCGGAGGAGAAAAGGTGGTGCTCAAACCTAATGATGTTTCAGTATTTACGACGCTCACCATTAATGGACGCCTGTTTGCTTGCCCACGAGAGCAATTCGATTCACTGACTCCCTTACCGGAACAAGAAGGCCCAACTGTTGGAACAGTGGGAACTTTTGAGCTGATGAGCTCCAAAGACTTAGCATACCAGATGACAATTTATGATTGGGAACTCTTCAACTGCGTGCATGAGCTGGAGCTAATCTATCACACATTTGGAAGGCATAATTTTAAAAAGACCACAGCTAACTTGGACTTGTTCCTGAAGAGATTTAATGAAATTCAGTTTTGGGTTGTCACTGAGATCTGCCTTTGTTCCCAGCTCAGCAAGCGTGTTCAGCTCCTAAAGAAATTTATTAAGATAGCAGCCCACTGTAAGGAGTACAAAAATCTGAATTCTTTTTTTGCCATCGTCATGGGACTAAGTAACGTCGCTGTGAGCCGCTTGGCACTCACGTGGGAGAAACTGCCGAGCAAGTTCAAGAAGTTCTATGCAGAGTTTGAAAGTTTAATGGATCCTTCGAGAAACCACAGGGCCTACAGGCTGACAGCAGCCAAGCTGGAGCCTCCTCTTATCCCCTTCATGCCTTTGCTCATCAAAGATATGACATTTACTCATGAGGGGAACAAGACGTTCATTGACAATCTAGTAAACTTTGAAAAAATGCGCATGATTGCAAACACCGCCAGAACAGTGAGGTACTACCGGAGCCAGCCGTTCAATCCCGATGCAGCGCAAGCTAATAAGAACCATCAGGATGTCCGGAGTTATGTACGGCAATTAAATGTGATTGACAACCAGAGAACTTTATCACAGATGTCGCACAGATTAGAGCCTCGTCGGCCATAG

Related Sequences

XP_004857740.1 Protein

Rapgef4 PREDICTED: rap guanine nucleotide exchange factor 4 isoform X2 [Heterocephalus glaber]

Length: 993 aa      View alignments
>XP_004857740.1
MVAAHAAHSSSSAEWIACLDKRPLERSSEDVDIIFTRLKEVKAFEKFHPNLLHQICLCGYYENLEKGITLFRQGDIGTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFGESILDNTPRHATIVTRESSELLRIEQKDFKALWEKYRQYMAGLLAPPYGVMETGSNNDRIPDKENVPSEKILRAGKILRNAILSRAPHMIRDRKYHLKTYRQCCVGTELVDWMLQQTPCVHSRTQAVGMWQVLLEDGVLNHVDQEHHFQDKYLFYRFLDDEHEDAPLPTEEEKKECDEELQDTMLLLSQMGPDAHMRMILRKPPGQRTVDDLEIIYEELLHIKALSHLSTTVKRELAGVLIFESHAKGGTVLFNQGEEGTSWYIILKGSVNVVIYGKGVVCTLHEGDDFGKLALVNDAPRAASIVLREDNCHFLRVDKEDFNRILRDVEANTVRLKEHDQDVLVLEKVPAGNRASNQGNSQPQQKYTVMSGTPEKILEHFLETIRLEPALNEATDSVLNDFVMMHCVFMPNTQLCPALVAHYHAQPSQGTEQEKLDYGLNNKRRVIRLVLQWAATYGDLLQEDDVAMAFLEEFYVSVSDDARMIAAFKEQLPELEKIVKQISEDAKAPQKKHKVLLQQFNTSDERAQKRQPIRGSDEVLFKVYCMDHTYTTIRVPVAASVKEVISAVADKLGSGEGLIIVKMSSGGEKVVLKPNDVSVFTTLTINGRLFACPREQFDSLTPLPEQEGPTVGTVGTFELMSSKDLAYQMTIYDWELFNCVHELELIYHTFGRHNFKKTTANLDLFLKRFNEIQFWVVTEICLCSQLSKRVQLLKKFIKIAAHCKEYKNLNSFFAIVMGLSNVAVSRLALTWEKLPSKFKKFYAEFESLMDPSRNHRAYRLTAAKLEPPLIPFMPLLIKDMTFTHEGNKTFIDNLVNFEKMRMIANTARTVRYYRSQPFNPDAAQANKNHQDVRSYVRQLNVIDNQRTLSQMSHRLEPRRP