Details from NCBI annotation

Gene Symbol Itga6
Gene Name integrin, alpha 6
Entrez Gene ID 101705215

Database interlinks

Part of NW_004624787.1 (Scaffold)

For more information consult the page for NW_004624787.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ITGA6 ENSCPOG00000008418 (Guinea pig)

Gene Details

integrin, alpha 6

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007567, Guinea pig)

Protein Percentage 95.04%
CDS Percentage 92.25%
Ka/Ks Ratio 0.12437 (Ka = 0.0319, Ks = 0.2568)

ITGA6 ENSG00000091409 (Human)

Gene Details

integrin, alpha 6

External Links

Gene Match (Ensembl Protein ID: ENSP00000386896, Human)

Protein Percentage 93.21%
CDS Percentage 90.34%
Ka/Ks Ratio 0.09328 (Ka = 0.0338, Ks = 0.3619)

Itga6 ENSMUSG00000027111 (Mouse)

Gene Details

integrin alpha 6

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000028522, Mouse)

Protein Percentage 91.04%
CDS Percentage 85.67%
Ka/Ks Ratio 0.0783 (Ka = 0.0492, Ks = 0.6278)

Itga6 ENSRNOG00000001518 (Rat)

Gene Details

integrin, alpha 6 (Itga6), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000039474, Rat)

Protein Percentage 92.56%
CDS Percentage 86.56%
Ka/Ks Ratio 0.06133 (Ka = 0.0373, Ks = 0.6085)

Genome Location

Sequence Coding sequence

Length: 3273 bp    Location: 9821989..9903095   Strand: +
>XM_004857678.1
ATGGCGGCCGCGGGGCAGCTGTGCCTGCTCTACCTGTCGGCGGTGCTCCTGCCTCGGCTCGGCGCAGCCTTCAACTTGGACACCCGCGAGGACAATGTGATCCGGAAATCTGGGGACCCCGGGAGCCTCTTCGGCTTCTCGCTGGCCATGCACTGGCAGCTGCACCCCGAGGACAAGCGGCTGTTGCTCGTGGGGGCCCCTCGGGCAAAAGCCCTGCCACGTCAGAGGGCCAACAGGACCGGGGGCTTGTACAGCTGTGACATCACCTCCCGGGGACCTTGCACCAGGATCGAGTTTGATAATGATGCCGACCCTACCTCGGAAAGCAAGGAAGATCAGTGGATGGGGGTCACAGTCCAGAGCCAAGGTCCAGGGGGCAAAGTGGTGATATGTGCTCATCGATATGAAAAAAGGCAGCATGTGAATACAAAGCAAGAATCCCGAGACATCTTTGGCAGGTGTTATGTACTGAGTCAGAATCTTAGGATTGAAGACGACATGGATGGAGGAGACTGGAGTTTTTGTGACGGGCGATTAAGAGGCCATGAAAAATTTGGTTCTTGCCAGCAAGGTGTAGCAGCTACTTTTACTAAAGACTTCCATTACATTGTGTTTGGAGCTCCGGGTACTTACAACTGGAAAGGGATTGTTCGAGTAGAGCAAAAGAATAACACTTTTTTTGACATGAACATCTTTGAAGATGGGCCTTATGAAGTTGGTGGAGAGACTGACCATGATGAAAGTCTCGTTCCTGTTCCTGCTAACAGTTATTTAGGCTTTTCTTTGGACTCAGGCAAAGGGATTGTTTCTAAAGATGAGATCACTTTTGTGTCTGGTGCTCCAAGAGCCAATCACAGTGGTGCTGTGGTTTTGCTAAAAAGAGAACTGAAGTCTGCACATCTTCTCCCCGAGCACATATTTGATGGGGAAGGTCTTGCTTCTTCATTCGGCTATGACGTGGCTGTGGTGGATCTCAACAAGGATGGGTGGCAAGATATAGTTATTGGAGCCCCACAGTATTTTGATAGAGATGGAGAAATTGGAGGGGCAGCGTATGTCTACATTAACCAGCAAGGCAGATGGAATAATGTCAAGCCAATTCGTCTTAATGGAACCAAAGACTCCATGTTTGGCATTGCTGTCAAAAATATTGGCGATATTAACCAAGATGGCTACCCAGATATTGCAGTTGGAGCTCCCTATGATGATATGGGAAAGGTTTTTATCTATCACGGATCCGCAAATGGAATAAATACCAAACCAACACAGGTTCTTGAGGGCACAACACCTTATTTCGGTTATTCAATTGCTGGGAATATGGACCTTGACAGAAATTCCTACCCTGATGTTGCTGTTGGTTCCCTCTCCGATTCAGTAACCATTTTCAGATCCCGGCCTGTAATTAACATTCAGAAAACCATCACAGTGACTCCCAACAGAATTGACCTCCACCAGAAAACATGCGGGGCCCCTAGTGGGATATGCCTCAAGGTTAAAGCCTGTTTTGAATATACTGCCAAACCCGCTGGTTACAATCCTCCAATAACAATTGTGGGCACACTTGAAGCTGAAAAAGCAAGAAGAAAGCATGGGCTGTCATCAAGAGTTCAGTTTCGAAACCAAGCATCTGAGCCCAGATATTCTCAGGAACTCACTCTGAACAGGCAGAAGCAGCGGCTGTGCATGGAGGAGACCCTGTGGCTGCAGGAAAACATCAGAGACAAACTGCGTCCCATCCCCATAACAGCTTCTGTGGAGATCCAGGAGCCCAGCTCTCGCCGGCGGGTAAACTCACTTCCGGAAATTCTTCCAATTCTGAATTCAAACGAACCTAAGACAGTCCAAACCGATGTGCATTTCTTAAAAGAGGGATGTGGAGACGACAATGTATGTAACAGCAACCTTAAACTAGAATATAAATTTTGTACCCGAGAAGGAAATCAAGACAAATTTTCTTATCTCCCAATCCAAAAAGGCGTTCCAGAACTAGTTCTAAAAGATCAGAAGGATATTGCTTTGGAAATAACAGTGACAAATAGTCCCTCTGATCCAAGAAATCCCAAAAAAGATGGCGACGACGCCCATGAAGCCAAACTCATAGCAACGTTTCCCGACACTCTGACATACTCGGCCTACCGAGAACTGAGGGCTTTCCCTGAGAAACAGCTGAGTTGTGTGGCCAACCAGAATGGCTCCCAGGCAGACTGTGAACTCGGAAATCCTTTTAAAAGAAATTCCAGTGTTACTTTTTACTTGATCTTAAGTACAACTGAGGTCACCTTTGACACCACTGATTTGAACATTAACCTGAAGTTGGAAACAACAAGCAATCAAGATAATTTGGCTTCAATTACAGCTAAAGCAAAAGTGGTTATTGAACTGCTTTTATCGGTCTCTGGAGTTGCTAAACCTTCCCAGGTGTATTTTGGAGGTACAGTGGTGGGTGAGCAAGCTATGAAATCTGAGGATGAAGTGGGAAGTTTAATAGAGTATGAATTCAAGGTGATTAACTTAGGCAAACCTCTTAAAAACCTTGGCTCAGCAACCTTGAATATTCAGTGGCCAAAAGAAATTAGCAATGGGAAGTGGTTGCTTTATTTGGTGAAAGTGGAATCCAAAGGACTGGAAAAGATAGTTTGTGAGCCACCAAGTGAAATAAACCTCCTGAACCTAAAGGAGTCTCACAAATCAAGAAAGAAACGAGAAATTGCTGAAAAACAGATAGACGATAGGAGAAAATTTTCTTTATTTACTGAAAGAAAATACCAGACCCTTAACTGTAGTGTGAACGTGAAGTGCGTGAACATCAGGTGCCCACTGAGTGGGCTGGACAGCAAGGCTTCTCTTGTTCTGCGGTCGAGGTTATGGAACAGCACGTTTCTAGAGGAGTATTCCAAGATGAACTACTTAGACATTCTCGTGCGGGCTTCCATTGAAGTGACTGCTGCTGCTGGGAATATCAAGTTGCCACACGCAGGCACTCAGGTTCGTGTGACAGTGTTTCCCTCGAAGACTGTGGCTCAATACTCGGGAATACCCTGGTGGATCATCTTCGTGTCTATTCTTGCTGGGATACTGATGCTTGCTCTGTTAGTGTTCCTACTTTGGAAGTGTGGATTCTTTAAGCGCTCTAGGTACGATGATAGCGTTCCCCGATACTATGCTGTAAGGATCCGGAAAGAAGAAAGAGAGATCAAAGATGAAAAATATAATGATAACTTGGAAAAAAAACAGTGGATCACAAAGTGGAACGAAAATGAAAGTTACTCCTAG

Related Sequences

XP_004857735.1 Protein

Itga6 PREDICTED: integrin alpha-6 [Heterocephalus glaber]

Length: 1090 aa      View alignments
>XP_004857735.1
MAAAGQLCLLYLSAVLLPRLGAAFNLDTREDNVIRKSGDPGSLFGFSLAMHWQLHPEDKRLLLVGAPRAKALPRQRANRTGGLYSCDITSRGPCTRIEFDNDADPTSESKEDQWMGVTVQSQGPGGKVVICAHRYEKRQHVNTKQESRDIFGRCYVLSQNLRIEDDMDGGDWSFCDGRLRGHEKFGSCQQGVAATFTKDFHYIVFGAPGTYNWKGIVRVEQKNNTFFDMNIFEDGPYEVGGETDHDESLVPVPANSYLGFSLDSGKGIVSKDEITFVSGAPRANHSGAVVLLKRELKSAHLLPEHIFDGEGLASSFGYDVAVVDLNKDGWQDIVIGAPQYFDRDGEIGGAAYVYINQQGRWNNVKPIRLNGTKDSMFGIAVKNIGDINQDGYPDIAVGAPYDDMGKVFIYHGSANGINTKPTQVLEGTTPYFGYSIAGNMDLDRNSYPDVAVGSLSDSVTIFRSRPVINIQKTITVTPNRIDLHQKTCGAPSGICLKVKACFEYTAKPAGYNPPITIVGTLEAEKARRKHGLSSRVQFRNQASEPRYSQELTLNRQKQRLCMEETLWLQENIRDKLRPIPITASVEIQEPSSRRRVNSLPEILPILNSNEPKTVQTDVHFLKEGCGDDNVCNSNLKLEYKFCTREGNQDKFSYLPIQKGVPELVLKDQKDIALEITVTNSPSDPRNPKKDGDDAHEAKLIATFPDTLTYSAYRELRAFPEKQLSCVANQNGSQADCELGNPFKRNSSVTFYLILSTTEVTFDTTDLNINLKLETTSNQDNLASITAKAKVVIELLLSVSGVAKPSQVYFGGTVVGEQAMKSEDEVGSLIEYEFKVINLGKPLKNLGSATLNIQWPKEISNGKWLLYLVKVESKGLEKIVCEPPSEINLLNLKESHKSRKKREIAEKQIDDRRKFSLFTERKYQTLNCSVNVKCVNIRCPLSGLDSKASLVLRSRLWNSTFLEEYSKMNYLDILVRASIEVTAAAGNIKLPHAGTQVRVTVFPSKTVAQYSGIPWWIIFVSILAGILMLALLVFLLWKCGFFKRSRYDDSVPRYYAVRIRKEEREIKDEKYNDNLEKKQWITKWNENESYS