Details from NCBI annotation

Gene Symbol Ccdc173
Gene Name coiled-coil domain containing 173, transcript variant X2
Entrez Gene ID 101721648

Database interlinks

Part of NW_004624787.1 (Scaffold)

For more information consult the page for NW_004624787.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CCDC173 ENSCPOG00000015613 (Guinea pig)

Gene Details

coiled-coil domain containing 173

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000014081, Guinea pig)

Protein Percentage 81.97%
CDS Percentage 87.86%
Ka/Ks Ratio 0.38279 (Ka = 0.1077, Ks = 0.2814)

CCDC173 ENSG00000154479 (Human)

Gene Details

coiled-coil domain containing 173

External Links

Gene Match (Ensembl Protein ID: ENSP00000391504, Human)

Protein Percentage 82.39%
CDS Percentage 87.83%
Ka/Ks Ratio 0.24688 (Ka = 0.0935, Ks = 0.3789)

Ccdc173 ENSMUSG00000070883 (Mouse)

Gene Details

coiled-coil domain containing 173

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000092548, Mouse)

Protein Percentage 72.66%
CDS Percentage 80.18%
Ka/Ks Ratio 0.26466 (Ka = 0.18, Ks = 0.68)

Ccdc173 ENSRNOG00000030535 (Rat)

Gene Details

coiled-coil domain containing 173 (Ccdc173), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000043154, Rat)

Protein Percentage 73.39%
CDS Percentage 81.1%
Ka/Ks Ratio 0.29271 (Ka = 0.1727, Ks = 0.5901)

Genome Location

Sequence Coding sequence

Length: 1638 bp    Location: 7214563..7183315   Strand: -
>XM_004857635.1
ATGCTAGTGCGGTTTGGACGGCGCTCTGGACAGGCGAGAAAAATCAAGGGTGCGAACTCTGAAGACAGTGAAGTTTCCTACCCACCTCTTCTACCTAGCAAAGTGGATCTCCGTCAGGTCACCATAATTCCACATGATGAGTGGAAAAGGATTCAGGATAGCCTGGACAGTTTGACAAGAGAAGCAGCAGCTCTTCGTGCAGAAAGAAAGGCAAAACAAGAAATGCATCTCCAATCCCAAGAAGTGGTGAAACATTGGACTAATACATATGCAGGGATGAAAGAACAGAAACTTAAAACCAAAACAATGCGCGATAAAGAAATTGAAGCCAAAAGACAAATCCTGGATCTGGAAGAGGAAATCCACAAACAAGGAGAAAGAAAAAAGGCCATTGAATATGCAAAGCAGTATCACTTTTACCAGACAGAAAGAGTGAAGAATTTTCATTCAGGACTTCTTCTCAGTAGAGTTATGAAAGAACGTGATGCCCAGATTGAATTCTGTAAGAGTAAGATAAAACCAGATACCAAATGGGAAGAACAACTGAAACTCAACATTGAAAAAGCTTTTAAAAAAGAGCAAGAAAAAGCAGAAAAACAACACAGAGAAAGAATGGCTCTTGCTGAGGAGCATCTAAAACAAATAAAGGAACATGAAGAAGAAAAAGAAAGGAGGAAAAAACATGAAGAAAAAGATGCCGAGGAGATAAAGCGACAAAATTTATTGTATGAAATAGAAATGAGAAAAAAACTAAAAAAGAAAAAAGAAAAGATAGATGAAAGCAGAAAGCTGTTTTTTGAATATATGTCGGATAAAAACATCATCAAAGCTGTCAAACAGCAGCAGCAAGAGGAGGAAGATGAAAAGATTCAAATATTTATCAAAGCAAAAAAGCATCTGGCACAAATCAGGAGAGAAAAAGAAGCTGAAACACACAGGCTAATGGAGGAACGGAGAGAAAAAATAAATAATTTCCTGAGTGAACTAATAAAAGAGAAACTTGATAATGAAGATTTGATTATTGCTAAAGATATTGCAGAAGCTGAGGCTGAATGGGAGAAAAAAGAAAAAGAAAAGTGTGAAAAAAACAAAGCAGATTTAAAAGCAATTGCAGAACATAGAGCCATTATGATGAAAAATAAAGAGGAAGAAGAAAGACAAAGGAAAATAGAATCTAAACAACAATTGCTGGCAATCATGAAAGCAGATCAAATTTTCAGGGAGCAGGAAAAGGAGAAAAAACACAAAGCTGATATAGAACGCCGAGAAGTTCAAGATGCCCATATTCAACAAATGGCCAAAAATAAATTTAATGCACAACAAGCAAAAGAAGCAGAATTAGAATATTGCAGACGTACTGAAACTCTTGCAGCTGAAAAGGAGAAAGAATTTCAGGATTATGCCAGAGAAGTGATTGAACTTGAATCTGAATCAACAAGTAAATATATTTACCCTCTTGTAAAAGCTGTACAGGAAGGACCTGGAGGTGGCCGTGGACCAGCTTTTGTGGACAGAGGTGGATTAAGACCCAGCTATCAAGCAAATGATTTTACTGGAGTCCAGCTCCCTTTTTACAGTTCTCAGGAATCAAAATATAATTTACAGAAGTCTAAGGGAAGGCTAGGTTTTACATGGTAG

Related Sequences

XP_004857692.1 Protein

Ccdc173 PREDICTED: coiled-coil domain-containing protein 173 isoform X2 [Heterocephalus glaber]

Length: 545 aa      View alignments
>XP_004857692.1
MLVRFGRRSGQARKIKGANSEDSEVSYPPLLPSKVDLRQVTIIPHDEWKRIQDSLDSLTREAAALRAERKAKQEMHLQSQEVVKHWTNTYAGMKEQKLKTKTMRDKEIEAKRQILDLEEEIHKQGERKKAIEYAKQYHFYQTERVKNFHSGLLLSRVMKERDAQIEFCKSKIKPDTKWEEQLKLNIEKAFKKEQEKAEKQHRERMALAEEHLKQIKEHEEEKERRKKHEEKDAEEIKRQNLLYEIEMRKKLKKKKEKIDESRKLFFEYMSDKNIIKAVKQQQQEEEDEKIQIFIKAKKHLAQIRREKEAETHRLMEERREKINNFLSELIKEKLDNEDLIIAKDIAEAEAEWEKKEKEKCEKNKADLKAIAEHRAIMMKNKEEEERQRKIESKQQLLAIMKADQIFREQEKEKKHKADIERREVQDAHIQQMAKNKFNAQQAKEAELEYCRRTETLAAEKEKEFQDYAREVIELESESTSKYIYPLVKAVQEGPGGGRGPAFVDRGGLRPSYQANDFTGVQLPFYSSQESKYNLQKSKGRLGFTW