Sequence details NCBI ID: XM_004857624.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Bbs5
Gene Name Bardet-Biedl syndrome 5, transcript variant X1
Entrez Gene ID 101718158

Database interlinks

Part of NW_004624787.1 (Scaffold)

For more information consult the page for NW_004624787.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ENSCPOG00000004965 (Guinea pig)

Gene Details

Uncharacterized protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004469, Guinea pig)

Protein Percentage 95.89%
CDS Percentage 95.01%
Ka/Ks Ratio 0.13228 (Ka = 0.0206, Ks = 0.1559)

Bbs5 ENSMUSG00000063145 (Mouse)

Gene Details

Bardet-Biedl syndrome 5 (human)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000074494, Mouse)

Protein Percentage 96.77%
CDS Percentage 89.44%
Ka/Ks Ratio 0.02769 (Ka = 0.015, Ks = 0.5404)

Bbs5 ENSRNOG00000007127 (Rat)

Gene Details

Bardet-Biedl syndrome 5 (Bbs5), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000009396, Rat)

Protein Percentage 96.48%
CDS Percentage 89.64%
Ka/Ks Ratio 0.03051 (Ka = 0.0161, Ks = 0.528)

Genome Location

Sequence Coding sequence

Length: 1026 bp    Location: 7045481..7062352   Strand: +
Raw sequence   
>XM_004857624.1
ATGTCCGTGCTGGACGTGCTTTGGGAGGACCGGGACGTCCGCTTCGACGTCTCCTCGCAACAAATGAAAACAAGACCTGGTGAAGTCCTTATTGATTGTTTAGATTCAATTGAAGACACCAAAGGAAATAATGGGGATAGGGGTAGACTTTTAGTAACTAATTTAAGAATTATCTGGCATTCGTTGGCATTACCCAGAGTCAATCTTTCTATTGGTTACAACTGCATATTGAATATTGCAACAAGGACTGCTAATTCTAAATTACGAGGCCAAACTGAAGCTCTTTATATACTAACAAAATGTAACAATACTCGCTTTGAATTTATATTTACCAATTTGGTTTCCGGAAGTCCTAGGCTTTTTACTTCTGTGATTGCAGTACACAGAGCGTATGAAACTTCTAAGATGTATCGTGAAGTTAAATTGAGAAGTGCACTGATTCAAAACAAGCAGTTAAGATTATTACCACAAGAACATGTGTATGATAAAATCAGTGGAGTGTGGAATTTATCCAGTGATCAGGGAAATTTAGGAACTTTTTTTATTACGAATGTGAGAATTGTGTGGCATGCAAATATGAATGACAGTTTCAATGTCAGTATACCATACCTGCAAATTCGTTCAATAAAGATTCGAGATTCAAAATTTGGTTTAGCTCTTGTCATAGAAAGCTCTCAGCAGAGTGGAGGATATGTTCTTGGCTTTAAAATAGATCCCATGGAAAAACTACAGGAATCAGTTAAGGAAATCAATTCACTTCACAAAGTCTATTCTGCCAATCCTGTATTTGGAGTGGATTATGAAATGGAAGAAAAGCCACAGCCCCTTGAAGCTCTGACAGTCGAACAAATCCAAGATGATGTAGAAATAGACTCTGACGATCACACAGATGCTTTTGTGGCTTATTTTGCTGATGGCAATAAGCAACAAGATCGTGAACCTGTGTTTTCAGAAGAACTGGGGCTTGCAATAGAGAAATTGAAGGATGGATTCACACTCCAGGGACTTTGGGAAGTGATGAGTTGA

Related Sequences

XP_004857681.1 Protein

Bbs5 PREDICTED: Bardet-Biedl syndrome 5 protein homolog isoform X1 [Heterocephalus glaber]

Length: 341 aa      
>XP_004857681.1
MSVLDVLWEDRDVRFDVSSQQMKTRPGEVLIDCLDSIEDTKGNNGDRGRLLVTNLRIIWHSLALPRVNLSIGYNCILNIATRTANSKLRGQTEALYILTKCNNTRFEFIFTNLVSGSPRLFTSVIAVHRAYETSKMYREVKLRSALIQNKQLRLLPQEHVYDKISGVWNLSSDQGNLGTFFITNVRIVWHANMNDSFNVSIPYLQIRSIKIRDSKFGLALVIESSQQSGGYVLGFKIDPMEKLQESVKEINSLHKVYSANPVFGVDYEMEEKPQPLEALTVEQIQDDVEIDSDDHTDAFVAYFADGNKQQDREPVFSEELGLAIEKLKDGFTLQGLWEVMS