Sequence details NCBI ID: XM_004857605.1 (Coding sequence)

Details from NCBI annotation

Gene Symbol Scn1a
Gene Name sodium channel, voltage-gated, type I, alpha subunit
Entrez Gene ID 101710495

Database interlinks

Part of NW_004624787.1 (Scaffold)

For more information consult the page for NW_004624787.1 (Scaffold)

Genome Location

Sequence Coding sequence

Length: 6030 bp    Location: 3939320..3768112   Strand: -
Raw sequence   
>XM_004857605.1
ATGGAGCAAACAGTGCTTGTACCACCAGGACCTGACAGCTTCAACTTCTTCACCAGAGAATCTCTTGCGGCTATTGAAAGACGCATTGCAGAAGAAAAAGCTAAGAACCCTAAACCAGACAAAAAAGATGATGATGAAAATGGCCCAAAGCCAAACAGTGACTTGGAAGCTGGAAAGAACCTTCCATTTATTTATGGAGACATTCCTCCAGAGATGGTGTCAGAGCCCCTGGAGGACCTGGACCCCTATTATATCAATAAAAAAACTTTTATAGTATTGAATAAAGGGAAGGCCATCTTCCGGTTCAGTGCCACCTCTGCCCTGTACATTTTAACTCCCTTCAATCCTCTTAGGAAAATAGCTATTAAGATTTTGGTACATTCATTATTCAGCATGCTAATTATGTGCACTATTTTGACGAACTGTGTGTTTATGACAATGAGTAACCCTCCTGACTGGACAAAGAATGTAGAGTACACCTTCACAGGGATATATACTTTTGAATCACTCATAAAAATTATTGCAAGGGGCTTCTGTTTAGAAGATTTTACTTTCCTTCGTGATCCATGGAATTGGCTTGATTTCACTGTCATTACATTCGCGTATGTGACAGAGTTTGTGGACCTGGGCAATGTCTCAGCATTGAGAACATTCAGAGTTCTCCGAGCACTGAAAACTATTTCAGTCATTCCAGGCCTGAAGACCATCGTGGGGGCGTTGATCCAGTCAGTGAAGAAGCTGTCTGATGTCATGATCCTGACTGTGTTCTGTCTGAGCGTGTTTGCACTAATAGGGCTGCAGCTGTTCATGGGCAACCTGCGGAACAAATGTATACAGTGGCCTGCTACCAACGCTTCCCTGGAGGAACATAGTATAGAAAAGAATATTACTGTGGATTACAATGGCACACTTGTAAATGAAACTGTTTATGAGTTTGATTGGAAGACGTATATTCAAGATTCAAGGTATCATTATTTCCTGGAGGGTTTTTTAGATGCACTACTATGTGGAAATAGCTCTGATGCAGGCCAATGCCCAGAAGGATATATTTGTGTGAAAGCTGGTAGAAACCCTAATTATGGTTACACAAGCTTTGATACCTTCAGTTGGGCATTTTTGTCCCTGTTTCGACTGATGACTCAGGACTTCTGGGAAAATCTTTACCAACTGACATTGCGTGCTGCTGGGAAAACATACATGATATTTTTTGTTCTGGTCATTTTCTTGGGCTCATTCTACTTAATAAATTTGATCCTGGCCGTTGTGGCCATGGCCTATGAGGAACAGAATCAGGCCACCTTGGAAGAGGCAGAGCAGAAAGAGGCAGAATTTCAGCAAATGCTTGAACAGCTTAAAAAGCAGCAAGAGACAGCTCAGCAGGCAGCTGCCACTACAGTCTCAGAACATTCCAGAGAGCCCAGTGCTGCAGGCAGGCTCTCCGACAGCTCCTCCGAAGCTTCCAAGTTGAGTTCCAAAAGTGCTAAGGAAAGAAGAAATCGGAGGAAGAAAAGAAAACAAAAAGAGCAGTCTGGTGGAGAAGAGAAAGATGAGGATGAGTTCCACAAATCTGAGTCAGAAGACAGCATCAGGAGGAAAGGGTTTCGCTTCTCTATTGAAGGGAACCGACTGACATATGAAAAGAGGTACTCTTCTCCACACCAGTCTTTGTTGAGCATCCGTGGCTCCCTATTTTCTCCAAGGCGAAATAGTAGGGCAAGCCTTTTCAGCTTTAGAGGTCGAGCAAAGGATGTGGGTTCTGAGAATGATTTTGCTGATGATGAGCACAGTACCTTTGAGGACAATGAGAGCCGGAGAGATTCCTTGTTTGTGCCCCGACGACACGGAGAGCGGCGCAACAGTAACCTCAGTCAGACCAGTAGGTCGTCCCGGATGCTGGCAGTGTTTCCAGCGAATGGCAAGATGCACAGCACTGTAGATTGCAATGGTGTGGTTTCCTTGGTTGGTGGACCTTCGGTTCCTACATCGCCTGTTGGACAGCTTCTGCCAGAGGTGATAATAGATAAGCCAGCTACTGATGACAATGGAACAACCACCGAAACTGAAATGAGAAAGAGAAGGTCAAGTTCTTTCCATGTTTCTATGGACTTTCTAGAAGATCCTTCCCAAAGGCAAAGAGCGATGAGTATAGCCAGCATCCTGACAAATACAGTGGAAGAACTTGAAGAATCCAGGCAGAAATGCCCACCCTGTTGGTATAAGTTTTCCAACATTTTCTTAATCTGGGACTGTTCTCCATATTGGTTAAAAGTGAAACACATTGTCAACCTGGTTGTGATGGACCCATTTGTTGACCTGGCTATCACCATCTGTATTGTTTTAAATACTCTTTTCATGGCCATGGAGCACTATCCCATGACAGAACATTTCAATAATGTTCTTACAGTAGGAAATTTGGTTTTCACTGGGATCTTTACAGCAGAAATGTTTCTGAAAATTATTGCCATGGATCCTTACTATTATTTCCAAGAAGGCTGGAATATCTTTGATGGTTTCATTGTGACGCTTAGCCTGGTAGAGCTTGGTCTTGCCAACGTGGAAGGATTATCAGTTCTCCGTTCATTTCGATTGCTCCGAGTTTTCAAGTTGGCAAAATCTTGGCCAACATTAAACATGTTAATAAAGATCATTGGCAATTCAGTGGGGGCTCTGGGGAATCTAACCCTGGTATTGGCCATCATCGTCTTCATTTTTGCTGTGGTCGGCATGCAGCTTTTTGGCAAAAGCTACAAAGATTGTGTCTGCAAAATTGCCAGTGACTGTAAACTCCCACGCTGGCACATGCATGACTTCTTCCACTCCTTCCTGATCGTGTTCCGCGTGCTGTGTGGAGAGTGGATAGAGACCATGTGGGACTGCATGGAGGTCGCTGGTCAAGCCATGTGCCTTACTGTCTTCATGATGGTCATGGTGATTGGAAACCTAGTGGTCCTGAATCTCTTTCTGGCCTTGCTTCTGAGCTCATTTAGTGCAGACAACCTTGCAGCCACTGATGATGACAATGAAATGAACAACCTTCAAATCGCTGTGGATAGGATGCATAAGGGAATAGCTTATGTCAAGAGAAAAATATATGAATTTATTCAACAGGCTTTTGTTAGGAAAAAAAAGATTTTAGATGAAATTAAACCACTTGATGATTTAAACAACAAAAAAGATAGTTGTATGTCCAACCATACAGGAGAAATTGGGAAAGACCTTGACTATTTGAGAGATATAAATGGAACTACAAGTGGCATTGGAACTGGCAGCAGTGTTGAAAAATATATTATCGATGAAAGTGATTACATGTCATTCATAAATAATCCCAGTCTTACTGTGACTGTACCAATTGCTGTAGGAGAGTCTGACTTTGAGAACTTAAACACAGAAGACTTTAGCAGTGAATCAGATCTGGAAGAAAGCAAAGAGAAACTTAATGAGAGCAGTAGCTCATCAGAAGGTAGCACTGTGGACATCGGTGCACCTGCAGAAGAACAACCTGTTGTGGAGCCCGAAGAGACCCTTGAGCCAGAAGCCTGTTTTACAGAAGGCTGTGTACAAAGGTTCAAGTGCTGTCAAATCAGTGTGGAGGAAGGGAGAGGAAAACAATGGTGGAACCTGAGAAGAACATGCTTCCGAATAGTTGAACATAATTGGTTTGAGACCTTCATTGTTTTCATGATTCTCCTGAGTAGTGGTGCTCTGGCATTTGAAGATATATATATTGATCAACGAAAGACAATTAAGACTATGTTGGAATATGCTGACAAGGTTTTCACTTACATCTTCATTCTGGAAATGCTTCTAAAATGGGTGGCATATGGATATCAGACATATTTCACCAATGCCTGGTGTTGGCTGGACTTCTTGATTGTTGATGTTTCATTGGTCAGCTTAACAGCAAATGCCTTGGGTTACTCAGAACTTGGTGCCATAAAATCCCTCAGGACACTGAGAGCTCTGAGACCTCTAAGAGCTTTATCACGATTTGAAGGGATGAGGGTGGTTGTGAATGCCCTTTTAGGAGCAATTCCCTCCATCATGAATGTGCTCCTGGTTTGTCTTATATTCTGGCTAATTTTCAGCATCATGGGCGTAAATTTGTTTGCTGGCAAATTCTACCACTGTGTTAACACCACAACTGGTGACACGTTTGAGATCAGCGAAGTGAATAACCATTCTGATTGCCTAAAACTAATAGAAAGAAATGAGACTGCCCGATGGAAAAATGTGAAAGTAAACTTTGATAATGTAGGATTTGGGTATCTCTCTTTGCTTCAAGTTGCCACATTTAAGGGATGGATGGATATAATGTATGCAGCAGTTGATTCCAGAAATGTGGAACTCCAGCCTAAGTATGAGGAAAGCCTGTACATGTACCTTTACTTTGTTATTTTTATCATCTTTGGTTCCTTCTTCACCTTGAACCTGTTTATTGGTGTCATCATAGATAATTTCAACCAGCAAAAAAAGAAGTTTGGAGGTCAAGACATCTTTATGACAGAAGAACAGAAGAAATACTATAATGCAATGAAAAAATTGGGATCAAAAAAGCCACAAAAGCCTATACCTCGACCAGGAAACAAATTTCAAGGAATGGTCTTTGACTTTGTAACCAGACAAGTTTTTGACATAAGCATCATGATTCTCATTTGCCTTAACATGGTCACGATGATGGTGGAAACTGATGACCAGAGTGACTATGTGACAAGCGTTTTGTCCCGAATCAATCTGGTGTTCATTGTGTTGTTCACTGGAGAATGTGTGCTGAAGCTCATATCCCTCCGCCATTATTATTTTACCATTGGCTGGAATATTTTTGATTTTGTGGTTGTCATTCTATCCATTGTAGGTATGTTTCTTGCGGAGCTGATAGAGAAGTATTTTGTGTCCCCTACCCTGTTCCGAGTGATCCGTCTGGCCAGGATTGGCCGAATCCTTCGTCTGATCAAAGGAGCAAAGGGGATCCGTACGCTGCTCTTTGCTTTGATGATGTCTCTTCCTGCCTTGTTTAACATCGGCCTCCTGCTCTTCCTGGTCATGTTCATCTACGCCATCTTTGGAATGTCCAACTTTGCCTATGTCAAGAGGGAAGTTGGAATTGATGACATGTTCAACTTTGAGACCTTTGGCAACAGCATGATCTGCCTGTTCCAAATTACCACCTCTGCGGGCTGGGATGGACTGCTCGCTCCCATTCTTAATAGTGGACCTCCAGACTGTGACCCTAATAAAGTTAACCCCGGAAGCTCCGTGAAGGGTGACTGTGGGAACCCATCGGTTGGGATTTTCTTTTTTGTCAGTTACATCATCATTTCCTTTCTGGTGGTGGTGAACATGTACATCGCTGTCATCCTGGAGAACTTCAGCGTTGCCACTGAAGAAAGTGCAGAGCCCCTGAGTGAGGATGACTTTGAGATGTTCTACGAGGTGTGGGAAAAGTTTGACCCTGATGCAACCCAATTCATGGAATTTGAAAAGCTCTCTCAGTTTGCAGCCGCGCTTGAACCTCCTCTCAATTTGCCACAACCAAACAAACTCCAGCTCATTGCTATGGATTTGCCGATGGTGAGTGGAGACCGAATCCACTGCCTGGACATCTTATTTGCTTTTACAAAGCGGGTTCTAGGAGAGAGTGGAGAGATGGATGCCCTGCGAATACAGATGGAAGAGCGATTCATGGCATCCAATCCCTCCAAAGTCTCCTATCAGCCAATTACAACTACTTTAAAAAGAAAGCAAGAAGAGGTGTCCGCTGTTATCATTCAGCGAGCTTACAGGCGCCACCTATTGAAGCGAACTGTAAAACAAGCTTCATTTGCATATAACAAAAACAAACTCAAAGGTGGGGCTAATCTTCTTGTGAAAGAAGACATGATAATTGACAGAATAAATGAAAATTCTATTACAGAGAAAACTGATCTGACTATGTCCACTGCAGCTTGTCCACCCTCCTATGATAGGGTGACAAAGCCGATTGTGGAAAAACATGAGCAAGAAGGAAAAGATGAAAAAGCCAAAGGAAAATAA

Related Sequences

XP_004857662.1 Protein

Scn1a PREDICTED: sodium channel protein type 1 subunit alpha [Heterocephalus glaber]

Length: 2009 aa      
>XP_004857662.1
MEQTVLVPPGPDSFNFFTRESLAAIERRIAEEKAKNPKPDKKDDDENGPKPNSDLEAGKNLPFIYGDIPPEMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCIQWPATNASLEEHSIEKNITVDYNGTLVNETVYEFDWKTYIQDSRYHYFLEGFLDALLCGNSSDAGQCPEGYICVKAGRNPNYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLILAVVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQETAQQAAATTVSEHSREPSAAGRLSDSSSEASKLSSKSAKERRNRRKKRKQKEQSGGEEKDEDEFHKSESEDSIRRKGFRFSIEGNRLTYEKRYSSPHQSLLSIRGSLFSPRRNSRASLFSFRGRAKDVGSENDFADDEHSTFEDNESRRDSLFVPRRHGERRNSNLSQTSRSSRMLAVFPANGKMHSTVDCNGVVSLVGGPSVPTSPVGQLLPEVIIDKPATDDNGTTTETEMRKRRSSSFHVSMDFLEDPSQRQRAMSIASILTNTVEELEESRQKCPPCWYKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEHFNNVLTVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKIASDCKLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLTVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDNEMNNLQIAVDRMHKGIAYVKRKIYEFIQQAFVRKKKILDEIKPLDDLNNKKDSCMSNHTGEIGKDLDYLRDINGTTSGIGTGSSVEKYIIDESDYMSFINNPSLTVTVPIAVGESDFENLNTEDFSSESDLEESKEKLNESSSSSEGSTVDIGAPAEEQPVVEPEETLEPEACFTEGCVQRFKCCQISVEEGRGKQWWNLRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILEMLLKWVAYGYQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCVNTTTGDTFEISEVNNHSDCLKLIERNETARWKNVKVNFDNVGFGYLSLLQVATFKGWMDIMYAAVDSRNVELQPKYEESLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPGNKFQGMVFDFVTRQVFDISIMILICLNMVTMMVETDDQSDYVTSVLSRINLVFIVLFTGECVLKLISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGPPDCDPNKVNPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEVWEKFDPDATQFMEFEKLSQFAAALEPPLNLPQPNKLQLIAMDLPMVSGDRIHCLDILFAFTKRVLGESGEMDALRIQMEERFMASNPSKVSYQPITTTLKRKQEEVSAVIIQRAYRRHLLKRTVKQASFAYNKNKLKGGANLLVKEDMIIDRINENSITEKTDLTMSTAACPPSYDRVTKPIVEKHEQEGKDEKAKGK