Sequence details NCBI ID: XM_004857604.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Galnt3
Gene Name UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 (GalNAc-T3)
Entrez Gene ID 101710129

Database interlinks

Part of NW_004624787.1 (Scaffold)

For more information consult the page for NW_004624787.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

GALNT3 ENSCPOG00000000034 (Guinea pig)

Gene Details

UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 (GalNAc-T3)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000029, Guinea pig)

Protein Percentage 93.84%
CDS Percentage 94.0%
Ka/Ks Ratio 0.16101 (Ka = 0.0295, Ks = 0.1834)

GALNT3 ENSG00000115339 (Human)

Gene Details

UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 (GalNAc-T3)

External Links

Gene Match (Ensembl Protein ID: ENSP00000376465, Human)

Protein Percentage 94.0%
CDS Percentage 92.84%
Ka/Ks Ratio 0.1048 (Ka = 0.0282, Ks = 0.2687)

Galnt3 ENSMUSG00000026994 (Mouse)

Gene Details

UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000028378, Mouse)

Protein Percentage 90.84%
CDS Percentage 86.99%
Ka/Ks Ratio 0.08164 (Ka = 0.0452, Ks = 0.5531)

Galnt3 ENSRNOG00000005727 (Rat)

Gene Details

UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 (GalNAc-T3) (Galnt3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000007615, Rat)

Protein Percentage 90.84%
CDS Percentage 87.47%
Ka/Ks Ratio 0.08679 (Ka = 0.0444, Ks = 0.512)

Genome Location

Sequence Coding sequence

Length: 1902 bp    Location: 3591615..3559903   Strand: -
Raw sequence   
>XM_004857604.1
ATGGCTCACCTAAAGCGACTAGTAAAGTTACATATCAAAAGACATTGCCACAGAATGTTCTGGAAGCTTGGTGCAGTAATTTTTTTCTTTATAATAATTTTGATTTTAATGCAAAGAGAAGTAAGTGATCAATATTCCAAAGAGGAATCAAGGATGGAAAGAAACCTGAAAAACAAAAACAAGGTGTTTGATTTAATGCTAGAAGCTGTAAATAATATTAAAGATGCAATGCCAAAAATGCAAATAGGAGCACCTGTCAGGCAAAACATTGATGCTCGCGAGAGACCCTGTCTTCAGGGATATTATACAGTGGCAGAGCTGAAACCTGTTCTTGACCGCCCACCTCAGGATTCTAATGCACCTGGTGCTTCTGGCAAAGCCTTCAAGACAACCAATTTAAGTATTGAAGAGCAAAAGGAAAAAGAACACGGGGAGGCAAAACACTGTTTTAATGCTTTTGCAAGTGACAGGATTTCATTACACCGAGACCTTGGACCCGACACCCGACCTCCTGAATGTATTGAACAAAAATTTAAGCGGTGTCCTCCTTTGCCTACCACCAGTGTCATAATAGTTTTTCATAATGAAGCGTGGTCCACGCTGCTTAGAACTGTCCACAGTGTGCTCTATTCTTCACCCGCAATACTGCTGAAGGAAATCATTTTGGTGGATGATGCTAGTGTAGATGATTACTTACATGAAAAACTAGAGGAATATATCAAACAATTTTCTATAGTAAAAATAGTCAGACAAAAAGAAAGGAAAGGTCTGATCACTGCCCGGTTGCTAGGAGCAGCAGTAGCAACAGCCGAAACACTCACATTTTTAGATGCTCACTGTGAGTGTTTCTATGGTTGGTTGGAGCCTTTGCTGGGCAGAATAGCTGAGAACTACACTGCCGTCGTGAGTCCAGACATTGTCTCCATAGATCTGAATACATTTGAATTCAACAAACCTTCTCCTTATGGTAGTAACCATAACCGTGGAAATTTTGACTGGAGCCTTTCATTTGGCTGGGAATCGCTTCCTGATCATGAGAAGCAAAGAAGGAAAGATGAAACCTATCCAATTAAAACACCTACTTTTGCAGGAGGCCTTTTTTCCATATCAAAAGAATATTTTGAGTATATTGGAAGTTATGATGAAGAAATGGAAATCTGGGGAGGTGAAAATATAGAAATGTCTTTCAGAGTATGGCAATGTGGTGGGCAGTTGGAGATTATGCCTTGCTCTGTTGTTGGACATGTTTTTCGCAGCAAAAGTCCTCATTCCTTTCCAAAAGGCACTCAAGTGATTGCTCGCAACCAAGTTCGCCTTGCAGAGGTCTGGATGGATGAATACAAGGAAATATTTTATAGGAGAAATACAGAGGCAGCCAAAATTGTTAAGCAAAAATCATTTGGTGATCTTTCAAAAAGATTTGCAATAAAAAACCGCCTGCAGTGTAAAAATTTTACATGGTATTTGAACACTGTTTATCCAGAAGTGTATGTGCCAGACCTTAATCCTGTTATATCTGGATATATTAAAAGTGTTGGTCAGCCTCTATGTCTGGATGTTGGAGAAAATAATCAAGGAGGAAAACCATTGATTTTGTACACATGTCATGGACTTGGGGGAAACCAGTACTTTGAATATTCTGCTCAACATGAAATCCGACACAACATCCAGAAGGAATTATGTCTTCATGCTGCTCCAGATCTGCTTCAGCTGAAAGCATGTGCCTACAAAGGTCACAAGACTGTTGTCACTGGAGAACAGATATGGAAACTCCAGAAGGATCAACTGCTATATAATCCATTCTTAAAATTGTGCCTTTCAGCAAATGGAGAACATCCACGCTTAGTGTCATGCAATCCATCAGATCCACTCCAAAAATGGATTTTTAACCAAAATGATTAA

Related Sequences

XP_004857661.1 Protein

Galnt3 PREDICTED: polypeptide N-acetylgalactosaminyltransferase 3 [Heterocephalus glaber]

Length: 633 aa      View alignments
>XP_004857661.1
MAHLKRLVKLHIKRHCHRMFWKLGAVIFFFIIILILMQREVSDQYSKEESRMERNLKNKNKVFDLMLEAVNNIKDAMPKMQIGAPVRQNIDARERPCLQGYYTVAELKPVLDRPPQDSNAPGASGKAFKTTNLSIEEQKEKEHGEAKHCFNAFASDRISLHRDLGPDTRPPECIEQKFKRCPPLPTTSVIIVFHNEAWSTLLRTVHSVLYSSPAILLKEIILVDDASVDDYLHEKLEEYIKQFSIVKIVRQKERKGLITARLLGAAVATAETLTFLDAHCECFYGWLEPLLGRIAENYTAVVSPDIVSIDLNTFEFNKPSPYGSNHNRGNFDWSLSFGWESLPDHEKQRRKDETYPIKTPTFAGGLFSISKEYFEYIGSYDEEMEIWGGENIEMSFRVWQCGGQLEIMPCSVVGHVFRSKSPHSFPKGTQVIARNQVRLAEVWMDEYKEIFYRRNTEAAKIVKQKSFGDLSKRFAIKNRLQCKNFTWYLNTVYPEVYVPDLNPVISGYIKSVGQPLCLDVGENNQGGKPLILYTCHGLGGNQYFEYSAQHEIRHNIQKELCLHAAPDLLQLKACAYKGHKTVVTGEQIWKLQKDQLLYNPFLKLCLSANGEHPRLVSCNPSDPLQKWIFNQND