Details from NCBI annotation

Gene Symbol unclassified transcription discrepancy
Gene Name mRNA
Entrez Gene ID 101722828

Database interlinks

Part of NW_004624786.1 (Scaffold)

For more information consult the page for NW_004624786.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TM4SF5 ENSCPOG00000002619 (Guinea pig)

Gene Details

transmembrane 4 L six family member 5

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002380, Guinea pig)

Protein Percentage 83.92%
CDS Percentage 84.09%
Ka/Ks Ratio 0.21075 (Ka = 0.1008, Ks = 0.4782)

TM4SF5 ENSG00000142484 (Human)

Gene Details

transmembrane 4 L six family member 5

External Links

Gene Match (Ensembl Protein ID: ENSP00000270560, Human)

Protein Percentage 82.65%
CDS Percentage 82.99%
Ka/Ks Ratio 0.1805 (Ka = 0.1025, Ks = 0.5676)

Tm4sf5 ENSMUSG00000018919 (Mouse)

Gene Details

transmembrane 4 superfamily member 5

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000019063, Mouse)

Protein Percentage 82.14%
CDS Percentage 81.63%
Ka/Ks Ratio 0.14176 (Ka = 0.0981, Ks = 0.6917)

Tm4sf5 ENSRNOG00000019510 (Rat)

Gene Details

transmembrane 4 L six family member 5 (Tm4sf5), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000026437, Rat)

Protein Percentage 80.1%
CDS Percentage 80.27%
Ka/Ks Ratio 0.15766 (Ka = 0.1156, Ks = 0.7332)

Genome Location

Sequence Coding sequence

Length: 681 bp    Location: 8659070..8664503   Strand: +
>XM_004857583.1
ATGTGCATAGGAAAGTGTGCCCGCTGTGTGGGCCTCTCACTCATCCTTCTCTCCCTGGTCTGCATTGTGGCCAATGCCCTCCTGNTGGTGCCTGACGGGAAGACCACCTGGACCAATGATCATCTCAGCTTGCAAGTCTGGCTCATGGCTGGCTTCATCGGTGGTGGCTTGATGGTACTGTGTCCCGGAATTACTGCAGCCTTTCGAGCAGGAGGCAAGGGCTGTTGTGGTGCAGGATGCTGTGGAAACCGCTGCAGGAGGCTACGTTCTGTCTTCTGCTCAGCCTTCGGGACGCTTGGTGCCATCTACTGTCTCTCGGTGTCAGGAGCCGGTCTTGGAATTGGACCCAAATGCTTAATGAAGGGCAAGTGGGACTATCACTTTCAAGAAACCAAAGGCGCTTACTTGCTCAACTATACTCAATGGAATTTGTGCGAGGAGCCACCTAACGTGGTCCCCTGGAATGTGACCCTATTCTCCTTGCTGGTGGCCGCTTCATGCCTGGAGATCATACTTTGCGGAATACAGTTGGTGAATGCAATCATTGGTGTCTTCTGCGGCGATTGCAAGAAAAAGGTGGGACGACGTGAGGTGGAGTTGTGCAGGGAACTTGCTTGTTCCCAGCTGCCTCCTCACTCACTTTCTTTTCCTGTAGGGCACTGCCAACTGAGGATCCACTGA

Related Sequences

XP_004857640.1 Protein

unclassified transcription discrepancy PREDICTED: LOW QUALITY PROTEIN: transmembrane 4 L6 family member 5 [Heterocephalus glaber]

Length: 226 aa      View alignments
>XP_004857640.1
MCIGKCARCVGLSLILLSLVCIVANALLXVPDGKTTWTNDHLSLQVWLMAGFIGGGLMVLCPGITAAFRAGGKGCCGAGCCGNRCRRLRSVFCSAFGTLGAIYCLSVSGAGLGIGPKCLMKGKWDYHFQETKGAYLLNYTQWNLCEEPPNVVPWNVTLFSLLVAASCLEIILCGIQLVNAIIGVFCGDCKKKVGRREVELCRELACSQLPPHSLSFPVGHCQLRIH