Details from NCBI annotation

Gene Symbol Shisa6
Gene Name shisa homolog 6 (Xenopus laevis), transcript variant X4
Entrez Gene ID 101703073

Database interlinks

Part of NW_004624786.1 (Scaffold)

For more information consult the page for NW_004624786.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SHISA6 ENSCPOG00000009604 (Guinea pig)

Gene Details

shisa family member 6

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008620, Guinea pig)

Protein Percentage 97.25%
CDS Percentage 92.44%
Ka/Ks Ratio 0.04553 (Ka = 0.0165, Ks = 0.363)

SHISA6 ENSG00000188803 (Human)

Gene Details

shisa family member 6

External Links

Gene Match (Ensembl Protein ID: ENSP00000390084, Human)

Protein Percentage 95.98%
CDS Percentage 93.76%
Ka/Ks Ratio 0.05165 (Ka = 0.0182, Ks = 0.3517)

Shisa6 ENSMUSG00000053930 (Mouse)

Gene Details

shisa homolog 6 (Xenopus laevis)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000071025, Mouse)

Protein Percentage 95.17%
CDS Percentage 90.74%
Ka/Ks Ratio 0.03685 (Ka = 0.0205, Ks = 0.5571)

Shisa6 ENSRNOG00000029012 (Rat)

Gene Details

shisa family member 6 (Shisa6), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000054317, Rat)

Protein Percentage 91.57%
CDS Percentage 90.42%
Ka/Ks Ratio 0.0634 (Ka = 0.0357, Ks = 0.5632)

Genome Location

Sequence Coding sequence

Length: 1500 bp    Location: 13697241..14006929   Strand: +
>XM_004857549.1
ATGGCGCTGCGGCGCCTCCTCTTCCTGCTGCTGCTCTCGCTGGAGCCCCTGGACCAGCTGCCCGGCGTTGATGCCGCCCGCGGCCGCGCCGCCAACCGGACCCTGAGCGCGGGCGCCGCTGCCGTCGGGGGCCGGCGTCCCGGGGGCGCCCTGGCCCGGGGCGGCCGCGAGCTGAACGGCACCGCCCGGGTCGCGGAGGCAGGGGGCCGGAGGGGACAGCCCGCGGCGGCTGTGGCGGCGGCGGCTGCGGCCAGCGCGACCGTCACCTACGAGACGTGCTGGGGCTACTACGACGTGAGCGGCCAGTACGACAAGGAGTTCGAGTGCAACAACAGCGAGAGCGGCTACCTGTACTGCTGCGGCACCTGCTACTATCGCTTCTGCTGCAAGAAGCGCCACGAGAAGCTGGACCAGCGCCAGTGCACCAACTACCAGAGCCCCGTGTGGGTACAGACGCCCAGCACCAGGGTGGTGTCGCCGGGGCCCGAGAACAAGTACGACCCGGAGAAGGACAAGACCAACTTCACCGTCTACATCACCTGCGGGGTGATCGCCTTCGTCATCGTGGCCGGCGTCTTCGCCAAGGTCTCCTATGACAAGGCCCACCGTCCTCCACGGGAGATGAACATCCACAGGGCTCTGGCTGACATCTTAAGACAACAGGGACCAATCCCCATAGCACACTGTGAAAGAGAAACTATCTCGGCTATCAATACCTCTCCCAAAGAGAACACACCGGTCAGATCGTCCTCCAAAAATCACTACACCCCCGTGCGTACAACCAAGCAGACTCCGGAGAAGCCTCGGATGAACAACATCCTGACATCGGCCACCGAGCCCTATGACCTCTCCTTCTCCCGCTCTTTCCAGAACTTGGCACACCTGCCCCCATCCTATGAGTCTGCAGTAAAGACCAACCCGAGCAAGTATTCATCTCTGAAGAGGCTAACCGACAAGGAGGCTGATGAGTACTACATGAGGCGGAGGCATCTGCCCGACCTGGCTGCCCGCGGCACCCTCCCGCTCAACGTCATCCAGATGTCTCAGCAGAAGCCGCTGCCGCGGGAACGCCCCCGCCGGCCCATCCGGGCCATGTCCCAGGACAGGGTCTTGTCCCCCCAGCGGGGCCTGCCAGATGAGTTCGGCATGCCCTATGACCGCATCCTGTCGGATGAGCAGCTGCTTTCCACTGAGCGCCTGCACTCCCAGGACCCGTTGCTGTCCCCAGAGCGGACGGCCTTCCCCGAGCAGTCCCTGTCGCGGGCCATCTCCCACACGGACGTCTTTGTGTCCACGCCCGTGCTGGACCGCTACCGCATGACCAAGATGCACTCCCATCCCAGTGCCTCCAATAACTCCTACGCCACCCTGGGCCAGAACCAGACAGCAGCCAAGCGCCACGCCTTTGCCTCGCGAAGACACAACACGGTGGAGCAGCTGCACTACATACCGGGCCACCACACCTGCTACACAGCCAGCAAGACTGAAGTGACCGTGTGA

Related Sequences

XP_004857606.1 Protein

Shisa6 PREDICTED: protein shisa-6 homolog isoform X4 [Heterocephalus glaber]

Length: 499 aa      View alignments
>XP_004857606.1
MALRRLLFLLLLSLEPLDQLPGVDAARGRAANRTLSAGAAAVGGRRPGGALARGGRELNGTARVAEAGGRRGQPAAAVAAAAAASATVTYETCWGYYDVSGQYDKEFECNNSESGYLYCCGTCYYRFCCKKRHEKLDQRQCTNYQSPVWVQTPSTRVVSPGPENKYDPEKDKTNFTVYITCGVIAFVIVAGVFAKVSYDKAHRPPREMNIHRALADILRQQGPIPIAHCERETISAINTSPKENTPVRSSSKNHYTPVRTTKQTPEKPRMNNILTSATEPYDLSFSRSFQNLAHLPPSYESAVKTNPSKYSSLKRLTDKEADEYYMRRRHLPDLAARGTLPLNVIQMSQQKPLPRERPRRPIRAMSQDRVLSPQRGLPDEFGMPYDRILSDEQLLSTERLHSQDPLLSPERTAFPEQSLSRAISHTDVFVSTPVLDRYRMTKMHSHPSASNNSYATLGQNQTAAKRHAFASRRHNTVEQLHYIPGHHTCYTASKTEVTV